Myxococcus sp. MxC21-1: QEG98_13120
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Entry
QEG98_13120 CDS
T09754
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
myx
Myxococcus sp. MxC21-1
Pathway
myx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
myx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QEG98_13120 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
myx03021
]
QEG98_13120 (rho)
03019 Messenger RNA biogenesis [BR:
myx03019
]
QEG98_13120 (rho)
Transcription machinery [BR:
myx03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
QEG98_13120 (rho)
Messenger RNA biogenesis [BR:
myx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
QEG98_13120 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
AAA_25
AAA_22
NACHT
ResIII
AAA
Motif
Other DBs
NCBI-ProteinID:
WNZ64529
LinkDB
All DBs
Position
complement(2775722..2777272)
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AA seq
516 aa
AA seq
DB search
MSENPDNRDPRDAPPVPAARAVAPPEPDDDGGDEGDDEGPDDGDSGGGAQGGAPGQPGQA
TGRRRRRRRRRRGAQVLFTPDGQAYRMQPGPDGQQVQVFLTPQELEQYRQRQAQQQQQQQ
QPPQPAHGGGGQQHARHAQHGGGGQQASQQANLSPVEGVLDTEAKGPNAFLRQLKRNLLA
APDDPELPKNLVQKLRLRQGQYITAFAQMRGHKGVIQKVDTVDGRPLEGAPRLPHFADLT
SVDPTERLKLENGHKEMVTRVLDLISPIGKGQRALIVAPPKTGKTIMLQRIAQAILSNHP
ECHVMVVLIDERPEEVTDMRRSIKAEVLASSSDRPTADHLKVAELALERARRLVESGKDV
VILLDSITRLARAFNKEVDNSGRTMSGGVDSRALERPKRIFGAARATEEAGSLTIIGTAL
IDTGSRMDEVIFEEFKGTGNSEVTLDRLLAEKRVFPAVNIAQSGTRKEEKLFTLREYEKV
KKLRQMLFSVKPVEAMEALVKRLSRYTYNDEFLDEL
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaaaccccgataaccgcgacccacgtgatgccccccctgttcccgccgcccgc
gccgtggcgccgcccgagccggacgatgacggtggcgacgagggcgacgacgaggggccc
gacgacggtgattccggcgggggcgcacagggtggcgcccccgggcagcctggccaggcc
accggccgccgccgccgccgtcggcgccgtcgccgtggcgcgcaggtcctcttcaccccg
gacggccaggcctaccggatgcagccgggaccggacggccagcaggtccaggtcttccta
acgccgcaggagctggagcagtaccgccagcggcaggcgcagcaacaacagcaacagcag
caacccccgcagccggcgcacggcggcgggggccagcagcacgcgcgccacgcacagcac
gggggcggcggccagcaggcctcgcagcaggcgaacctgtcgccggtggagggcgttctg
gacacggaggccaagggccccaacgccttcctgcgccagctcaagcgcaacctgctggcg
gcgccggatgacccggagctgcccaagaatctggtccagaagctgcggctgcggcagggc
cagtacatcaccgccttcgcgcagatgcggggccacaagggcgtcatccagaaggtggac
acggtggacggccggccgctcgagggcgcgccgcggctgccgcacttcgcggacctgacg
tcggtggaccccaccgagcggctcaagctggagaacggtcacaaggagatggtgacccgg
gtgctggacctcatctcccccattggcaagggacagcgcgcgctcatcgtcgccccgccc
aagacgggcaagacgatcatgctccagcgcatcgcccaggccatcctctccaaccacccg
gagtgccacgtcatggtggtgctcatcgacgagcgtccggaagaagtgacggacatgcgg
cggagcatcaaggcggaggtgctggcctccagctccgaccgccccaccgcggaccacctg
aaggtggcggagctggccttggagcgcgcgcgccggctggtggagtcgggcaaggacgtg
gtcatcctcctggactcgattacgcgtctggcccgcgccttcaacaaggaggtcgacaac
tccggccgcaccatgtccggcggcgtggacagtcgcgccctggagcgccccaagcgcatc
ttcggcgccgcccgcgcgacggaggaggccggctcgctgaccatcatcggcacggcgctc
atcgacaccggcagccgcatggacgaggtcatcttcgaggagttcaagggaacgggtaac
tccgaggtcactttggaccggctcctggcggagaagcgcgtcttcccggccgtcaacatc
gcccagtccggcacgcgcaaggaggagaagctcttcaccctgcgcgagtacgagaaggtg
aagaagctgcggcagatgctcttctccgtgaagccggtggaggccatggaggcgctcgtg
aagcggctgtcccgctacacgtacaacgacgagttcctcgacgagctgtag
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