Myxococcus sp. MxC21-1: QEG98_13945
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Entry
QEG98_13945 CDS
T09754
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
myx
Myxococcus sp. MxC21-1
Pathway
myx03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
myx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
QEG98_13945 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
myx03400
]
QEG98_13945 (uvrB)
DNA repair and recombination proteins [BR:
myx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QEG98_13945 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
QEG98_13945 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
UB2H
AAA_22
Kinesin
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
WNZ64671
LinkDB
All DBs
Position
2961284..2963398
Genome browser
AA seq
704 aa
AA seq
DB search
MSDFQLVSEHRPGGDQPRAIGELTQGVLRGDRYQTLLGVTGSGKTFTMANVIANVQRPTL
VMAHNKTLAAQLYGEFKALFPHNAVEYFVSYYDYYQPEAYVPSTDTFIEKDSSINDNIER
MRHSATHSLRTRDDVIIVASVSCIYGLGAARSYVDLAVRAAVGEEMGRDTFMRKLVEAQY
KRNDLDFHRGTFRARGDTVEVFPAYEEERAVRVSFFGDEVERVTEFDPLRGVTLGALEKI
VIFPASHYVAEEDVRRRAIQTIRDELSEQLQTFKREGKLLEAQRLEQRAMFDLEMIEQVG
YCSGIENYSRHFSGRAAGEPPPCLIDYFPRNLLVMLDESHQTVPQIGAMYRGDRARKETL
VGFGFRLPSALDNRPLKFGEFEELVPQAIFVSATPAEYELQKSQGVVVEQIIRPTGLTDP
EVEIRPVGNQVDDLLEEVRQRVSRSERVLVTTLTKRMAEDLTEYFSDVGVRVRYLHSDID
AIERMAIIRDLRKGEFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSHVSLIQTIGR
AARNVNGRVIMYADNVTDSMKKALEETTRRRDIQRAYNQANGITPRSVKSNITDLSEHAA
YEAGDVGALPLAAEGEDDVLQPKEIKRLIEEFTKDMLAAADEMQFEKAAEYRDRVQLLKD
MDLGLKPASRSLLRAPAKAAEAEAPKKGKGRGGGGRSARARSRK
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgtcggactttcagctcgtcagcgaacaccgtcccggaggcgaccagccgagggccatt
ggcgaactcacgcagggcgtcctgcggggggaccgctaccaaacgctcctgggcgtcacc
gggtcaggcaagacgttcacgatggcgaacgtcatcgccaacgtgcagcggcccacgctg
gtgatggcccataacaagacgctggccgcgcagctctacggcgaattcaaggcgctcttc
ccgcacaacgcggtcgagtacttcgtctcgtactacgactactaccagcccgaggcctac
gttccgtcgacggacaccttcatcgagaaggactcgtccatcaacgacaacattgaacgg
atgcgccactcggccacccattcgctgcgcacgcgggacgacgtcatcatcgtcgccagc
gtgtcctgcatctacggcctgggcgcggcccgcagctacgtggacctggcggtgcgcgcg
gcggtgggcgaggagatgggccgcgacaccttcatgcgcaagctggtggaggcccagtac
aagcgcaacgacctggacttccaccgcggcaccttccgcgcgcgcggcgacaccgtcgag
gtgttccccgcgtacgaggaggagcgggccgtgcgcgtcagcttcttcggcgatgaagtg
gagcgcgtcaccgagttcgacccgctgcgcggcgtgacgctgggcgcgctggagaaaatc
gtcatcttccccgccagccactacgtggccgaggaggacgtgcgccggcgcgcgattcag
accatccgcgacgagctgtccgaacagctgcagaccttcaagcgcgagggcaagctgctg
gaggcgcagcggctggagcagcgcgccatgttcgacctggagatgattgagcaggttggc
tactgcagcggcatcgagaactactcccggcacttctctggccgcgcggcgggagagccg
ccgccgtgcctcatcgactacttcccgcgcaacctgctggtgatgctcgacgagagccac
cagacggtgccgcagattggcgccatgtaccgcggcgaccgcgcgcgcaaggagacgctg
gtgggcttcggcttccgcctgcccagcgcgctggacaaccgcccgctcaagttcggtgag
ttcgaggagctggtgccccaggccatcttcgtctccgcgacgccggcggagtacgagctg
cagaagtcacagggcgtggtggtggagcagatcatccgccccacgggcctgaccgacccg
gaggtggagattcgccccgtgggcaatcaggtggacgacctgctggaggaggtgcgtcag
cgcgtgtcccgcagcgagcgcgtcctggtgacgacgctcaccaagcgcatggcggaagac
ctcacggagtacttctccgacgtaggcgtgcgcgtgcgctacctgcactcggacatcgac
gcgattgagcgcatggccatcatccgcgacttgcgcaagggcgagttcgacgtcctggtg
ggcatcaacctgctgcgcgagggcctggacatccccgaggtgtccctggtggccatcctg
gacgcggacaaggaaggcttcctgcgcagccacgtctccctcatccagacgattggccgc
gcggcccgtaacgtgaacggccgcgtcatcatgtacgcggacaacgtcaccgactccatg
aagaaggccctggaggagacgacgcgccgccgcgacatccagcgcgcgtacaaccaggcg
aacggaatcaccccgcgttcggtgaagagcaacatcaccgacctgtccgagcacgcggcc
tacgaggcgggtgacgtgggcgccctgccgctggcggccgaaggcgaggacgacgtcctc
cagccgaaggaaatcaagcggctcatcgaggaattcaccaaggacatgctcgccgccgcg
gacgagatgcagttcgagaaggcggccgagtaccgggaccgcgtgcagctcttgaaggac
atggacctggggctcaagccggcgtcgcgctcgctgctgcgggccccggcgaaggcggcg
gaagcggaggccccgaagaagggcaaggggcgcgggggcggaggacgctccgcgcgggcc
cggagccgcaagtag
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integrated database retrieval system
