Myxococcus sp. MxC21-1: QEG98_18770
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Entry
QEG98_18770 CDS
T09754
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
myx
Myxococcus sp. MxC21-1
Brite
KEGG Orthology (KO) [BR:
myx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
myx03032
]
QEG98_18770
03036 Chromosome and associated proteins [BR:
myx03036
]
QEG98_18770
03400 DNA repair and recombination proteins [BR:
myx03400
]
QEG98_18770
DNA replication proteins [BR:
myx03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
QEG98_18770
Chromosome and associated proteins [BR:
myx03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
QEG98_18770
DNA repair and recombination proteins [BR:
myx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
QEG98_18770
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-DNA_bdg
HU-CCDC81_bac_2
DUF2267
Motif
Other DBs
NCBI-ProteinID:
WNZ65482
LinkDB
All DBs
Position
3988535..3988918
Genome browser
AA seq
127 aa
AA seq
DB search
MTRSELIERIVERATHVPRREVEAIVHAVFEEMSQALIAGRRIELRGFGVFCVRTRRART
GRNPKTGQRVSVPARRTLSFAAGKDLRERLNAPPATAASPIPDTPPGEALSTLPLAAGAS
FSVPVTG
NT seq
384 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgcagtgagctcatcgagcgcatcgtggagcgtgccacgcatgttccacggcgt
gaggtggaagccatcgtccacgccgtcttcgaggaaatgtcccaggccctgatcgccgga
cggcgaatcgagctgcggggcttcggcgtcttctgtgtccgcacgcgccgggctcgcacg
ggccgcaaccccaagacgggccagcgcgtgtcggtgcccgcgcggcgcacgttgtccttc
gccgccggaaaggacctgcgcgagcggctcaatgccccacccgccacggcggcttccccc
attccggacaccccacccggcgaggcgctgtcgacgctgccgctcgccgcgggggcctcg
ttctccgtgcccgtcacgggttga
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integrated database retrieval system
