Myxococcus sp. MxC21-1: QEG98_20920
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Entry
QEG98_20920 CDS
T09754
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
myx
Myxococcus sp. MxC21-1
Pathway
myx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
myx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QEG98_20920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
myx03019
]
QEG98_20920
03009 Ribosome biogenesis [BR:
myx03009
]
QEG98_20920
Enzymes [BR:
myx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
QEG98_20920
Messenger RNA biogenesis [BR:
myx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QEG98_20920
Ribosome biogenesis [BR:
myx03009
]
Prokaryotic type
rRNA helicases
QEG98_20920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
WSD
AAA_22
CMS1
Motif
Other DBs
NCBI-ProteinID:
WNZ58634
UniProt:
A0AA96XCF7
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All DBs
Position
4584924..4586174
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AA seq
416 aa
AA seq
DB search
MKPALVEALSALGYEEPTPIQAAALPPLLAGKDLLGIAATGTGKTAAFALPLLNHVEPGA
CRPNTTSALVLVPTRELAMQVSEAIHRYGQKLGISVLPLYGGQVIGQQLRVLKRGVDVVV
ATPGRALDHLRRGTLQLDDVRVVVLDEADEMLDMGFAEDLEAILSGTPEDRQTALFSATL
PPRIASIAERHLHEPVRVKIAREKVEQGEIPRVRQTAYVVPRAFKIATLGRLLDVESPTA
AIIFCRTRTEVDDLTVSLNGRGWRAHALHGGMTQEQRDRVIKQLKSQGTDLLVATDVAAR
GLDIPRLSHVVNFDVPNAPEAYVHRIGRTGRAGREGVAITLVEPREHRLLRNIERVTGQR
IEVATVPTVADMREKRQEMLRASLRETLVTGEYDSLRNVVESRPASSTPWTSPPPP
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
ttgaagcccgcgctcgtcgaggcgctcagcgcgctcggctacgaggagcccacccccatc
caggccgccgccctcccgccactgctcgcggggaaggacctgctcggcatcgccgccacc
ggcaccggcaagacggcagccttcgccctgcccctgctcaaccacgtggagcccggcgcg
tgccggcccaacaccacgtccgcgctagtgctggtccccacgcgcgagctggccatgcag
gtctccgaggccatccaccgctacggccagaagctcggcatctccgtgctgcccctgtac
ggcggccaggtcattggccagcagctccgcgtcctcaagcgcggcgtggacgtcgtcgtc
gccacgccgggccgcgcgctggaccacctgcgccgtggcacgttgcagctcgatgacgtg
cgcgtcgtcgtgctcgacgaggccgacgagatgctcgacatgggcttcgccgaggacctg
gaggccatcctctccggcacgcccgaggaccggcagacggccctcttctccgctacgctc
ccgccgcgcatcgccagcatcgccgagcgtcacctgcacgagcccgtgcgcgtgaagatt
gcccgcgagaaggtggaacagggggagattccccgcgtccggcagacggcctacgtcgtg
ccgcgcgccttcaagatcgccaccctgggccgcctgctcgacgtggagtcgcccaccgcg
gccatcatcttctgccgcacgcgcacggaggtggacgacctcaccgtctccctcaacggc
cgtggctggcgtgcccacgccctgcatggcggcatgacgcaggagcagcgagaccgcgtc
atcaagcagctcaagtcccagggcaccgacctgctcgtggccaccgacgtcgcggcgcgc
ggcctggacatcccccgcctgtcccacgtggtgaacttcgacgtccccaacgcgcccgag
gcctacgtgcaccgcatcggccgcacgggccgcgccggccgcgagggcgtggccatcacc
ctggtggagccccgcgagcaccggctgctgcgtaacatcgagcgcgtcaccggccagcgc
atcgaagtggccaccgtgcccaccgtcgcggacatgcgcgagaagcggcaggagatgctg
cgcgcatccctgcgcgagacgctggtgaccggtgagtacgactccctccgcaacgtggtg
gagagccggccagcgagttcgacgccatggacatcgccgccgccgccgtga
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