Myxococcus sp. MxC21-1: QEG98_24920
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Entry
QEG98_24920 CDS
T09754
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
myx
Myxococcus sp. MxC21-1
Pathway
myx00521
Streptomycin biosynthesis
myx00523
Polyketide sugar unit biosynthesis
myx00525
Acarbose and validamycin biosynthesis
myx00541
Biosynthesis of various nucleotide sugars
myx01055
Biosynthesis of vancomycin group antibiotics
myx01100
Metabolic pathways
myx01110
Biosynthesis of secondary metabolites
myx01250
Biosynthesis of nucleotide sugars
Module
myx_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
myx00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
QEG98_24920 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
QEG98_24920 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
QEG98_24920 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
QEG98_24920 (rfbB)
00525 Acarbose and validamycin biosynthesis
QEG98_24920 (rfbB)
Enzymes [BR:
myx01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
QEG98_24920 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
NAD_binding_10
KR
adh_short
Motif
Other DBs
NCBI-ProteinID:
WNZ59320
UniProt:
A0AA96XB52
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All DBs
Position
complement(5587874..5588899)
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AA seq
341 aa
AA seq
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MNVLVTGGCGFIGSNLVKYLRRERPAWTVVNLDKLTYAGNLESLSELEGDPQHVFIRGDI
GNRELVEHLMSVHAIDAVMHLAAESHVDRSILGPEVFVTTNVLGTQQLLEASRARGVKRF
LMVSTDEVYGSLGPTGAFTESSPLQPSSPYSASKTSADLVALAYHHTFNLDVVVTRCSNN
YGRYQFPEKLIPLMVVNALHDKPLPVYGDGGNVRDWLHVEDHCHALLLALEKGRAGEVYN
IGGGAERRNIDIVKAILGLVGKPESLIQYVKDRPGHDRRYAIDPSKIRAELGWTPAHTFE
QGLAETVRWFVDHPAWWQRVTSGAYRQYFETQYRTRLQGRA
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtactggtgacaggtggctgtggcttcatcgggtccaacctcgtgaagtatctg
cgccgtgagcggcctgcctggacggtggtcaacctcgacaagctcacgtacgccggcaac
ctggagagcctgtccgagctggagggcgacccccagcacgtcttcatccggggcgacatc
ggcaatcgcgagctggtggagcacctgatgtccgtgcacgccatcgacgcggtgatgcac
ctggcggcggagagccacgtcgaccgctccatcctcgggccggaggtgttcgtcaccacc
aacgtgctgggcacccagcagctcctggaggccagccgcgcccgcggcgtgaagcgcttc
ctcatggtgtccaccgacgaggtctacggctcgctggggcccacgggcgccttcaccgag
tcctcgccgttgcagccctccagcccgtactcggccagcaagacgagcgccgacctggtg
gcgctcgcgtatcaccacacgttcaacctggacgtcgtcgtcacgcgctgctcgaacaac
tacggccgctaccagttccccgagaagttgattccgttgatggtggtgaacgcgctgcac
gacaagccgctgccggtgtacggcgacggcggcaacgtgcgcgactggctccacgtggag
gaccactgccatgcgctgctattggcgctggagaagggccgggccggcgaggtctacaac
atcggcggcggggcggagcggcggaacatcgacatcgtgaaggcgatcctgggcctcgtg
ggcaagccggagtcgctcatccagtacgtgaaggaccggccgggacatgaccggcgctac
gccatcgacccgtcgaagattcgcgcggagctgggctggacgcccgcgcacaccttcgag
cagggcctggcggagacggtgcgctggttcgtggaccaccctgcgtggtggcagcgcgtc
acgagtggcgcctatcgccagtacttcgaaacgcagtaccgcacgcgcctgcaggggagg
gcctga
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