Myxococcus sp. MxC21-1: QEG98_30950
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Entry
QEG98_30950 CDS
T09754
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
myx
Myxococcus sp. MxC21-1
Pathway
myx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
myx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QEG98_30950 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
myx03021
]
QEG98_30950 (rho)
03019 Messenger RNA biogenesis [BR:
myx03019
]
QEG98_30950 (rho)
Transcription machinery [BR:
myx03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
QEG98_30950 (rho)
Messenger RNA biogenesis [BR:
myx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
QEG98_30950 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
S1CSD-TOTE-2
Spore_III_AA
NACHT
OB_RNB
AAA_22
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
WNZ60375
LinkDB
All DBs
Position
complement(6869936..6871351)
Genome browser
AA seq
471 aa
AA seq
DB search
MLTPISRPVRDDDLQEARISGESEEPAASLPPPPEAPETPAITEVTRDGEPMQVIKLNDL
KRMKITDLSKMAHDVGIEGYQGLKKQDLIFALLGGIADKRFEVHAEGVLELLSDGFGFLR
SADSDYQPSPDDIYVSPSQVRRFNLRPGDTVTGPIRQPREGERFFALQKVDKVNFADPMS
DAARERILFDNLTPLYPTRKLKLEHESSEMTTRIIDMFCPIGLGQRCLIVAPPKAGKTVL
LQNIAHAISRNHPDVYLIVLLVDERPEEVTDMERSVRGEVVSSTFDEPATRHVQVAEMVI
DKAKRLVEQKYDVCILLDSITRLARAYNTVVPASGKILSGGVDANALHKPKRFFGAARNI
EEGGSLTIIGTALIDTGSRMDEVIFEEFKGTGNSEIVLDRKLMEKRIFPTLDINKSGTRK
EELLLGPGDLVRITALRQVLHPFTPIDAMEFVLKHMRPTASNADFLGSMNR
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
gtgctcacccccatctcccgcccggtgcgggacgacgacctccaggaagctcgtatctcc
ggcgagtccgaagagccggccgcctccctgccgcctcctccggaggcccctgagactccc
gccatcacggaagtcacccgggatggcgagcccatgcaggtcatcaagctcaatgacctg
aagcggatgaagatcaccgacctctcgaagatggcccacgacgtgggcatcgaggggtac
cagggtctgaagaagcaggacctcatcttcgcgctgctgggcggcatcgccgacaagcgc
ttcgaggtccacgcggagggcgtgctggagctgctcagcgacggcttcggcttcctgcgc
agcgcggacagcgactaccagcccagcccggacgacatctacgtgtccccgtcgcaggtg
cgccgcttcaacctgcgccctggcgacacggtgacgggccccatccgccagccccgcgag
ggcgagcgcttcttcgcgctccagaaggtggacaaggtcaacttcgcggacccgatgtcg
gacgcggcgcgcgagcgcatcctgttcgacaacctcacgccgctctatccgacgcgcaag
ctcaagctggagcatgagtcgtcggagatgaccacgcgcatcatcgacatgttctgcccc
atcggcctgggccagcgctgcctcatcgtggcgccgccgaaggccggcaagacggtgctg
ctgcagaacatcgcgcacgccatcagccgcaaccacccggacgtgtacctcatcgtgctg
ctcgtggacgagcgcccggaagaggtgacggacatggagcgcagcgtgcgcggcgaggtg
gtgtcctccaccttcgacgagcccgccacgcgccacgtgcaggtggcggagatggtcatc
gacaaggccaagcgcctggtcgagcagaagtacgacgtctgcatcctgctggactccatc
acccgtctggcgcgcgcctacaacacggtggtgcccgcgtccggcaagattctgtccggc
ggcgtggacgccaacgcgctccacaagcccaagcgcttcttcggcgccgcgcgcaacatc
gaagaggggggctcgctgaccatcatcggcaccgcgctcatcgacaccggcagccgcatg
gacgaagtcatcttcgaggagttcaagggcacgggtaactccgaaatcgtcctggaccgg
aagctgatggagaagcgcatcttcccgacgctggacatcaacaagtccggtacgcgcaag
gaggagctgctgctcggcccgggcgacctggtgcgcatcaccgccctgcggcaggtgctc
cacccgttcacccccatcgacgcgatggagttcgtgctcaaacacatgcggcccaccgcg
tcgaatgcggacttcctcgggtcgatgaaccggtag
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