Mycobacteroides sp. PCS013: RHO23_06745
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Entry
RHO23_06745 CDS
T11887
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
myy Mycobacteroides sp. PCS013
Pathway
myy03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
myy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RHO23_06745 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
myy03400
]
RHO23_06745 (uvrA)
DNA repair and recombination proteins [BR:
myy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RHO23_06745 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RHO23_06745 (uvrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_21
RsgA_GTPase
AAA_16
AAA_25
DnaJ_CXXCXGXG
NACHT
Viral_helicase1
ScfRs
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
XRC88692
LinkDB
All DBs
Position
1397067..1400021
Genome browser
AA seq
984 aa
AA seq
DB search
MADRLIVRGAREHNLRGIDLDLPRDSLIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA
YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH
CPVCGEKIAKQTPQQIVDQVLDMEEGLRFQVLAPVVRTRKGEFVDLFEQLNSQGYSRIRV
DGVVHSLTDPPKLKKQEKHDIEVVIDRLAVKASSKQRLTDSVETALRLADGIVVLEFVDA
EEDSPHRERRFSEKLACPNGHPLAVDDLEPRSFSFNSPYGACPECTGLGIKKEVDPDLVV
PDPDMTLAEGAIAPWSMGQNADYFVRLMAGLGDALGFDVDTPWKKLPAAAKKAILDGSSE
QVHVRYKNRYGRTRSYYAEFEGVLAFLQRRMEQTESEWAKERYEGFMRDIPCPVCDGTRL
KPEILSVTLTAGEHGTKSIAQVCDLSIAECAQFLNTLTLGHREQAIAGQVLKEVQFRLGF
LLDVGLQYLSLSRAAGTLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRRLIE
TLTRLRDLGNTLIVVEHDEDTIKHADWVVDIGPAAGEHGGQVVHSGTYAELLKNKHSVTG
SYLSGAASIPLPPMRRSIDVKRQVTVVGAREHNLKDIDVSFPLGVLTSVTGVSGSGKSTL
VNDILATVLANKLNGARQVPGRHTRVTGLDQVDKLVRVDQSPIGRTPRSNPATYTGVFDK
IRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCHGAR
YNRETLEVHYKGKTIAQVLDMPIEEAAEFFEPITSIHRYLNTLVEVGLGYVRLGQPAPTL
SGGEAQRVKLAAELQKRSTGKTVYILDEPTTGLHFEDIRKLLTVINGLVDKGNTVIVIEH
NLDVIKTSDWIIDMGPEGGSGGGSVVAQGAPEVVAQTAGSHTGEFLADMLPKPQRNGKTP
AKAPAKSAGKPPAKPRTRKVVTPV
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
gtggccgaccgtctgatcgtgcggggcgcgcgtgagcacaacctgcgcggtatcgacctt
gacctaccccgggacagcctcatcgtcttcacgggcctgtccggatccgggaagtcgagt
ctggcctttgacaccatctttgccgaggggcagcgcaggtacgtcgaatcgctgtccgcg
tacgcccgccagttcctggggcagatggacaagcccgatgttgatttcatcgaggggttg
tcgcctgcggtatcgatcgaccagaaatccaccaaccgcaacccccggtccacggtgggc
accatcaccgaggtctacgactacctgcgtctgttgtacgcgcgggccgggaccccacac
tgcccggtgtgcggggagaagatcgccaagcaaaccccgcagcagatcgtggatcaggtg
ctggatatggaggagggcctgcggttccaggtgctcgctcccgtggtccgcacgcgcaag
ggcgagttcgtcgacctcttcgagcagctgaactcgcagggttacagccgcattcgggtt
gacggcgtggtgcattcgctcaccgacccgcccaagctcaagaagcaggagaagcatgac
atcgaggtggtcatcgaccgtctcgccgtcaaggccagctccaagcagcgactgacggac
tcggtggagactgcgctgcgcctcgccgacggaatcgtcgtgctcgagttcgtcgacgcc
gaggaagattcgccgcaccgtgaacgcaggttctccgagaagctcgcgtgccccaacggt
cacccgctggcagtggatgatcttgaaccgcggtcgttttcgttcaactcgccctacggc
gcctgccccgagtgcaccggtctgggaatcaagaaggaagtcgaccccgatctggtggtc
cccgacccggatatgacactcgccgagggcgccatcgcaccctggtctatgggccagaac
gccgactacttcgtccggctcatggcggggctgggcgatgccctcgggttcgatgtggac
accccctggaagaagcttcccgccgccgcgaagaaggcgatcctggacggctcgtccgag
caggtgcatgtccggtacaagaaccggtacggccgcacccggtcgtactacgccgagttc
gaaggcgtactggcctttctgcaacgccgcatggagcagaccgagtccgaatgggccaag
gagcgctacgaaggtttcatgcgggacatcccgtgtcctgtgtgcgacggaacccggctc
aagccggagatcctctccgtgaccctgaccgcgggggagcacggcaccaaatcgatcgcg
caggtctgtgacctgtcgatcgccgagtgcgctcagttcctcaacacactgaccctcggg
caccgtgagcaagccatcgcgggacaggtactcaaggaagtccagttccggctcgggttc
ctcctggacgtgggcttgcagtatctgtcgttgtcgcgggcggcgggcacgctctccggt
ggtgaggctcagcgcatccggctggccactcagatcggctccggtctggtgggtgtgctc
tatgtgctggacgagccgtctatcggtctgcatcagcgcgataatcgccgactcatcgag
acacttacgcggctaagggatctcggtaatacgctgatcgtcgtcgagcacgacgaggac
accatcaaacacgcagactgggttgtcgacatcgggcctgcggcgggggagcacggcggc
caggtggtgcacagcggcacctacgccgagctgctgaaaaacaagcactccgtcacgggc
tcgtatctttctggggctgcgagcattccgctgccacccatgcgccggtcgatcgatgtc
aagcgtcaggtcaccgtggtcggtgcgcgcgagcacaacctcaaggacatcgacgtctcc
ttcccgctcggggtgttgacctcggtcaccggagtgtcgggctcggggaagtcgacattg
gtcaacgacatcctcgctacggtgctggccaacaagctcaacggtgcacggcaggttccc
ggccggcatactcgcgtgaccggcctggatcaggtggacaagctggtgcgggtggatcag
tcgcctatcgggcgcacaccgcgctccaatccggccacctacaccggggtgttcgacaag
atccgcacgctgttcgcggccaccaccgaggccaaggtgcgcggttatcaacccggccgt
ttctcgttcaacgtcaagggcgggcgctgtgaggcatgcacgggcgacggcaccatcaag
atcgagatgaacttccttccggacgtatacgtgccgtgcgaggtgtgtcatggcgcgcgc
tacaaccgggagacgctcgaggtccactacaagggcaagaccatcgcgcaggtgctggac
atgcccatcgaggaggccgctgagttcttcgagcccatcacctccatccaccggtatctg
aacacgctggtggaggtcggtctgggctacgtgcgtctggggcagccggctccgacactg
tccggaggcgaggcgcagcgcgtcaagctggctgccgagctgcagaagcgctcaacgggc
aagaccgtctatatcctcgacgagcccactacagggctgcatttcgaggacatccgcaag
ctactcactgtgatcaacggcttggtcgacaagggcaacaccgtgatcgtgatcgagcac
aacctcgatgtcatcaagacgtcggactggatcatcgacatgggccccgaaggcggatcg
ggcggcggttccgtggtggcgcagggcgctcccgaagtggtggcgcagaccgcgggcagc
cacaccggtgagttcctcgcggacatgttgcccaagccccaacgcaacggcaagaccccc
gcgaaggctccggcgaagagtgccggaaagccgcccgccaaaccgcggaccaggaaggtt
gtcacgccggtctag
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integrated database retrieval system
