Mycobacteroides sp. PCS013: RHO23_18705
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Entry
RHO23_18705 CDS
T11887
Symbol
ligD
Name
(GenBank) non-homologous end-joining DNA ligase
Organism
myy Mycobacteroides sp. PCS013
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Motif
Pfam:
LigD_Prim-Pol
DNA_primase_S
Motif
Other DBs
NCBI-ProteinID:
XRC90029
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Position
3762757..3763965
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AA seq
402 aa
AA seq
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MLQVAGREVTITHPDKVVFPPGEDTAGVTKADLVHYYLDVAEGALRGVRDRPMILKRFVK
GISQEAVFQKRVPEKRPDWIASAELHYARGTSAREAVVTDAASLAWVVNLGCVDLNPHPV
RADDLDHPDELRIDLDPVPGVPWSQILDVAFVVRAVLEDHGLTAWPKTSGSRGFHIYAPI
APRWTFRELRLAAETVAREVERRAPELATSRWWKEERHGVFVDFNQNAKDRTVASAYSVR
ATPDARVSTPLRWDEVARCRPSEFTLHTVRQRFAEIGDPWRDMDAERQAGTGALDQLLEL
AAELGPAEKAPKGASRDGRRQSIMPLVEIARTKTKPEAEAAFGMWRDKYPAVAKLLEPQD
ILIDGMRGPSSIWYRVRVNLVHVPEAERPAQEELIADYSPWG
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
gtgctgcaggtcgcggggcgcgaggtcaccatcacgcaccccgacaaggtggtctttccc
ccgggtgaggacacagcgggcgtcaccaaggccgacctggtgcactactacctggatgtc
gccgaaggggcgctgcgcggcgtgcgtgaccggccgatgattctgaagcggttcgtcaag
ggcatctcacaggaggcggtgttccagaaacgggtgcccgagaagcggccggactggatt
gcctccgcggagctgcactacgcgcgcggaacctccgcccgagaggccgttgtcaccgat
gcggcgtcgttggcgtgggtggtcaacctgggatgtgtcgacctcaatccgcacccagtg
cgtgcagacgatctggatcatcctgacgagctgcgtattgacctggaccccgtcccgggg
gtgccgtggagccagatcctcgatgtcgcgttcgtcgtgcgcgcggttcttgaagaccat
gggctgacggcatggccgaagacgtctggctcgcgcggctttcatatctacgcgcccatc
gcgccgcgatggacgttccgggagctgcgtctggccgccgagacggtggcccgcgaggtg
gagcggcgcgccccggagctggcgaccagccggtggtggaaggaggaacgccatggggtg
ttcgtcgacttcaaccagaacgccaaggatcgcacggtggcctcggcgtactccgtgcgt
gcgacccccgatgcccgggtgtcgacgccgctgcgctgggacgaggtcgcccgttgtcgc
ccttcggagttcacgctgcacaccgtgcgccaacgattcgctgagatcggcgatccgtgg
cgggacatggacgccgaaaggcaagccggcaccggggcgctggatcagctcctggagctg
gccgccgaactgggccccgccgaaaaagccccgaaaggcgcttcccgggacggtcggcgt
cagtcgatcatgccgttggtcgagattgcgcgaaccaagaccaagccggaggctgaggcc
gcgttcggcatgtggcgggacaagtatccagcagtagctaaattacttgaaccgcaagat
attctgattgacggcatgcgcggccccagctcgatttggtatcgggtgcgagtcaacctg
gtgcacgtccccgaggccgagcggcccgcgcaggaggaactgatcgccgactactcgccg
tggggctag
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