Myroides sp. ZB35: BK054_09725
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Entry
BK054_09725 CDS
T04543
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
myz
Myroides sp. ZB35
Pathway
myz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
myz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BK054_09725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
myz03019
]
BK054_09725
Messenger RNA biogenesis [BR:
myz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BK054_09725
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Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
APA92488
UniProt:
A0AAC9IUC0
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All DBs
Position
complement(2147682..2149244)
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AA seq
520 aa
AA seq
DB search
MEILMIVGGIILGAAIGFMVAKYLEKNHASSILSNAQNEAKTILRDAKTDGEAIKKEKIL
QAKEKFIELKSEHEQVILARDKKMAEAEKRTRDKESQISSELAKAKKANDESEKKVAEYS
TKLEIIEKKQEEVDRLHRSQVEQLEIISGLTAEEAKAQIVESLKNEAKANAMASIQETIE
EAKLTAQQEAKKIIINTIQRIGTEEAVENCVSVFNIESDDVKGRIIGREGRNIRAIEAAT
GVEIIVDDTPEAIILSCFDPVRREIARLSLHRLVTDGRIHPARIEEVVAKTTKQIDEEII
EIGKRTVIDLGIHGLHPELIKIVGRMKYRSSYGQNLLQHSREVAKLCGLMAAELGLNVKL
AKRAGLLHDIGKVPETESELPHAILGMQWAEKYGEKPEVCNAIGAHHDEIEMTTLIAPII
QVCDAISGARPGARRQVLDSYIQRLKDLESIANEFGGVKNAYAIQAGRELRVIVESEKVT
DEMAATLSFDISQKIQTEMTYPGQVKITVIRETRAINIAK
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggaaatactaatgatcgttgggggaataatacttggtgctgcgataggcttcatggtg
gcgaagtaccttgaaaaaaaccatgcttcctcaatattgtctaatgctcaaaacgaggcc
aaaacgatattgcgtgatgcaaagactgatggagaggcaattaaaaaagagaaaatatta
caagctaaagaaaagtttatagagttaaaatctgaacatgaacaagtaatcttagctcgt
gataagaagatggcggaggctgagaaaagaactagagataaagagtctcaaatttcaagt
gaattagctaaagcaaagaaagcaaatgatgaaagtgagaaaaaagttgctgaatacagt
actaaacttgaaatcattgaaaagaaacaagaagaggtagatagacttcaccgttctcaa
gtagaacaattagaaatcatctctggccttacagctgaggaagcaaaagctcaaatcgta
gagagtcttaaaaatgaagcaaaagcaaatgctatggcttcaatacaagagactatcgaa
gaagctaaacttacagctcaacaagaggctaaaaagattattatcaatactattcaacgc
attggtacggaagaagctgtagaaaactgcgtgtctgtattcaacatcgaatctgatgat
gtaaaaggtagaatcattggtagagaaggtagaaacattagagctatagaagcagctact
ggagtagaaatcattgtagatgatactcctgaggctattatcctatcttgctttgaccct
gttagaagagagattgctcgtctatctctacacagattagtaacagatggtcgtattcac
cctgctcgtatcgaagaagtagtagctaaaacgactaaacaaatcgatgaagaaattatc
gaaataggtaagagaactgttattgatttaggtattcacggtctacaccctgaactaatc
aaaatagtaggtagaatgaaataccgttcttcttatggacaaaacttactacaacactca
cgtgaagtagctaaattatgtggattaatggcagcagagttaggcttaaatgttaagtta
gctaaacgtgctggattacttcacgatatcggtaaagtaccagaaacagaaagtgaatta
ccgcacgctatcttaggtatgcagtgggcagaaaaatacggagagaaacctgaagtatgt
aatgcaataggtgctcaccacgatgagatagaaatgactacattaatcgctccgattatc
caagtatgtgatgctatctcaggtgctagaccaggtgctagacgtcaagtattggattca
tacattcaacgtcttaaagatctagaaagtatagctaatgaattcggaggagttaaaaat
gcttatgctattcaagcaggacgtgaattacgcgttatcgtagaaagtgaaaaagtaact
gatgaaatggctgctactctttctttcgatatctctcaaaaaatccaaactgagatgact
tatccaggtcaagtgaagattactgtaattagagaaactagagcaataaatattgctaaa
taa
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