Myroides sp. ZB35: BK054_12445
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Entry
BK054_12445 CDS
T04543
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
myz
Myroides sp. ZB35
Pathway
myz03420
Nucleotide excision repair
myz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
myz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BK054_12445
03430 Mismatch repair
BK054_12445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
myz03400
]
BK054_12445
Enzymes [BR:
myz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BK054_12445
DNA repair and recombination proteins [BR:
myz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BK054_12445
MMR (mismatch excision repair)
Other MMR factors
BK054_12445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
ResIII
Motif
Other DBs
NCBI-ProteinID:
APA93011
UniProt:
A0AAC9IQW4
LinkDB
All DBs
Position
2800637..2802973
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AA seq
778 aa
AA seq
DB search
MQNYIDQLNEAQRAPVLQKDGPMIVIAGAGSGKTRVLTLRIAYLMHQGVDAFNILALTFT
NKAAREMKVRIAQIVGNSEAKNLWMGTFHSVFAKILRAEADKLGYPSNFTIYDSQDSQRL
IGQIIKEMQLDKDIYKPKEILSRISSYKNSLVTVKAYFNNPELQEADAMSKRPRIGEIYN
NYVERCFKSGAMDFDDLLLKTNELLTRFPDVLSKYQNRFKYILVDEYQDTNHSQYLIVRA
LSDRFQNICVVGDDAQSIYAFRGANINNILNFQKDYEGVETYRLEQNYRSSRNIVEAANS
VIDNNKVKLEKVVWTANDFGPKIKVHRSLTDGEEGRFVASTIFEEKMQNQKNNSDFAILY
RTNAQSRAMEDALRKKDIPYRIYGGLSFYQRKEIKDVLSYLRLVINPKDEEALVRVINYP
ARGIGNTTLDKLTIAANHYKRSIFEVVEHIDKIDLKITAGTRNKLSDFSNMIKAFQALEE
TMDAYQLTEHIVKKTGLVQEMRKDTTPEGITRMENIEELLNGIKDFIEGQREVDGARGAL
SEFMEDVALATDLDKDTGDDDRVALMTIHLAKGLEFPTVFCVGMEEDLFPSAMSMNTRSE
LEEERRLFYVALTRAEHQAYLTYAQSRYRWGKLVDSDPSRFIEEIKDDYLEYLTPIETNY
RYKPTINADIFGDVDKSKLRLKKPVAGTPPAYVTDNEEPKENRNIRKLKPVDASPTKTTS
LTNGNQLLEVGQVVMHERFGKGVIINLEGVGADKKAEIRFDVGGIKKLLLRFAKLQVL
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaattatatagatcagttaaatgaggctcaaagagcacctgtactccagaaagat
ggaccaatgatagtaatcgctggagcagggtcagggaagacgagagtgttgactttacgt
attgcttatttaatgcatcaaggagttgatgcttttaatattctagcgttgacgtttacc
aataaggcagctcgtgaaatgaaagtaaggattgctcaaatcgttgggaattcagaggct
aagaatctatggatgggaacattccactctgtattcgctaagatacttagagcagaggca
gataagttggggtatcctagtaactttactatttatgattctcaagatagtcaacgcctt
ataggacagattataaaagagatgcaattagataaagatatttataagccaaaagaaata
ctaagtagaatttcatcttataaaaatagtttagtaactgtaaaagcatattttaataat
cctgaactacaagaggctgatgcgatgagtaaaaggcctcgtataggagagatttataat
aattacgtagaacgatgttttaagtcaggagcaatggattttgatgatttattgttaaag
acaaatgagttattaactcgttttcctgatgtactttctaaatatcaaaatagattcaaa
tatatattagtggatgagtatcaggatactaaccattcacaatatttgatagttcgtgca
ttatcagatcgttttcagaatatttgtgtagttggggatgatgctcagagtatatacgcc
tttagaggagcgaatattaataatattttgaatttccaaaaagattatgaaggggtagaa
acttatcgattagagcagaattatcgttcgtcaagaaatattgtagaagcagctaactca
gttattgataataataaagttaagctagaaaaggtagtatggaccgcgaatgactttgga
ccaaagataaaagtacatagatcattaacagatggagaggagggacgttttgtagcttct
actatttttgaagaaaagatgcaaaatcaaaagaacaacagtgattttgctattttatat
cgaacgaatgcacagtctcgtgctatggaggatgctttgcgtaaaaaggatataccttat
cgtatttatggtggtctatcgttttatcaaaggaaagagattaaggatgtattgagttat
ctaagattggtaattaaccctaaagatgaggaagcattagtacgtgtaattaactatcca
gcaagaggtataggaaatactactttggacaaattaacaatcgctgctaatcactataag
cgttctatatttgaagtagttgaacatattgataaaattgacttaaagattactgctggt
acacgaaataaattgagtgattttagcaatatgattaaggcttttcaagcgttggaagaa
acaatggatgcttatcaattgacggaacatattgttaagaaaactgggcttgttcaagag
atgcgtaaggatactactccagagggtattacacgtatggagaatattgaggaactactg
aatggtattaaagactttattgaaggtcaacgtgaggtagatggtgctagaggagcttta
agtgagtttatggaagatgtggctttagctacagatttagataaagatacgggtgatgat
gacagggtggccttgatgacaatccacttagcgaaaggactggaattcccgactgtattc
tgtgtaggaatggaagaagatctgttcccaagtgcaatgagtatgaatactagaagtgaa
ttagaggaggaaagaagattgttctatgttgctttaacacgtgcagagcatcaggcttat
ttaacttatgctcaatcaagatatagatggggtaaattagtagatagtgatccttctcga
tttatagaggagattaaggatgattatttagagtatttgactccaatagaaacgaactat
agatataagccaacaattaatgctgatatttttggtgatgtagataagagtaagttgaga
ttgaaaaaacctgttgcgggtactcctcctgcttatgtaaccgataatgaagaaccaaaa
gagaataggaatataaggaaattaaagcctgtagatgcttcaccaactaagactactagt
cttacaaatggtaatcaactgttagaagtaggacaggtagttatgcatgaacgttttggt
aaaggggttattattaatcttgaaggtgttggtgcagataagaaagcagagattcgattt
gatgttggaggaataaaaaaactgctgttaagatttgctaagcttcaagttttatag
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