Myroides sp. ZB35: BK054_15315
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Entry
BK054_15315 CDS
T04543
Name
(GenBank) exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
myz
Myroides sp. ZB35
Pathway
myz03030
DNA replication
myz03430
Mismatch repair
myz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
myz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BK054_15315
03430 Mismatch repair
BK054_15315
03440 Homologous recombination
BK054_15315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
myz03032
]
BK054_15315
03400 DNA repair and recombination proteins [BR:
myz03400
]
BK054_15315
Enzymes [BR:
myz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BK054_15315
DNA replication proteins [BR:
myz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BK054_15315
DNA repair and recombination proteins [BR:
myz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BK054_15315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
GIY-YIG
DNA_pol_A_exo1
DEDDh_C
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
APA93569
UniProt:
A0AAC9IN79
LinkDB
All DBs
Position
3437466..3438815
Genome browser
AA seq
449 aa
AA seq
DB search
MYAVLDIETTGGQFNEEGITEIAIYRFDGNQIVDQFISLVNPEMEIQPFVVKLTGINNAM
LRLAPKFYEIAKRIIEITDNCVIVAHNAEFDYRVLRNEFKRLGYEYSRNTLCTVELSQKL
LPDMPSYSLGKLVRSLGIPIADRHRANGDAMATEKLFELLLSKDKEKTILTSMIKSDIKT
GISPKFLDIVDTLPSTVGIYYILDKEGNIIFIGKSKNIRKKVLQHFTSNSHIFKKIQQET
YTVTFEKTGTELIALLKEAEEINTNKPKYNKVSKKSVFPYSIYLKTNLEGYLYLSIEKTD
GRKRNLMAFTSPNEARKFLHKIFQGQQELPYVEFIYEKKSTKITADNFFINFTSTREEFN
ANILELFKPYDIDKDHVLILDKGRKVDEKSAVALEKGKLNGYCFYNLNHQINAPERIAAN
LTPILFNRNNRNIILNYLNKKIGYKLIHY
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
ttgtacgcagttttagatatagaaacaactggtgggcagtttaatgaagaaggaatcacc
gaaattgctatatatcgatttgatggtaatcagatcgtagatcagtttattagtttagtt
aatccagagatggagatacaacctttcgtagtgaaacttacgggaatcaataatgctatg
ctacggctagctccgaagttctacgagatagctaagcgcatcatagaaataacggacaac
tgtgtcatcgtagctcataatgctgaatttgattatcgagtactgcgcaatgagtttaaa
cgactaggttatgaatacagtcgcaatacactgtgtacagtagaactatcacagaagtta
ctgcctgatatgccttcttatagcttaggtaaactagtgcgatcacttggtattcccatc
gcagatagacatcgcgctaatggagatgctatggctacagaaaagctattcgaattactt
ctatcaaaagataaagagaagaccatcttaacctctatgattaagtcggatatcaaaacg
gggattagtcctaagtttttggatatcgtagacactttgccttctactgtaggtatttat
tatatcttggacaaagaaggtaatattatcttcatcggtaagagcaagaatattagaaag
aaagtcttacagcactttacaagtaattcgcatatattcaaaaaaatacaacaagaaacc
tatactgtcactttcgaaaaaacaggtactgaactcatcgcgcttctaaaagaggctgaa
gagatcaataccaataaaccaaagtacaataaggtcagtaagaaaagtgtattcccctac
tctatttatttaaaaactaatctagagggatacttatacctatctatcgaaaagacagat
ggtagaaagagaaatctaatggcgtttacatcgcctaatgaagctagaaaattcttacat
aagatattccaaggtcaacaagagttaccttatgtagagtttatatatgagaaaaaatca
actaaaataacagctgataacttctttatcaactttacctcgacaagagaagagttcaat
gctaatatacttgaactatttaagccttatgatatagacaaagaccatgttctaatctta
gacaaaggccgtaaagtagatgagaaaagtgctgtcgctttagaaaaagggaagctaaac
ggatattgcttctataacttaaaccaccaaatcaacgccccagaacgaatagcagccaat
ttaacgccaattttgtttaatagaaacaacagaaatatcattcttaattatctaaataag
aagatcggttacaaattaattcactactaa
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