Methylorubrum zatmanii: B2G69_01880
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Entry
B2G69_01880 CDS
T04981
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
mza
Methylorubrum zatmanii
Brite
KEGG Orthology (KO) [BR:
mza00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mza03016
]
B2G69_01880
Enzymes [BR:
mza01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
B2G69_01880
Transfer RNA biogenesis [BR:
mza03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
B2G69_01880
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GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
ARO53016
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All DBs
Position
410639..411205
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AA seq
188 aa
AA seq
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MPRLFTGIEIPPDIAERLSFFRGGLPGARWIEPSDYHVTLRFLGEIDDMIAADVDAGLRE
ARVRAPLTVTLDGLASFGGDRPRALYASVVPTPELIDLQEEHERIARRAGAAPERRKFTP
HVTLARLNREASPEAVARRLTEAGVFPRLTFTARRAALFSARTSRGGGPYLVEAAYPFAD
ADFELDDE
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgcctgttcaccggcatcgagattccgccggacatcgccgagcggctgtcgttc
ttccgcggcggcctgcccggcgcgcgctggatcgagccgagcgactaccacgtcaccctg
cgcttcctcggcgagatcgacgacatgatcgctgccgatgtcgatgccggcctgcgggag
gcgcgggtgcgcgcgccgctcaccgtgacgctggacgggctcgcgagcttcggcggagac
cggccgcgggcgctctacgcctcggtcgtccccacgccggaactcatcgatttgcaggaa
gagcacgagcgcatcgcccgccgggccggtgccgcgccggagcggcgcaagttcacgccg
catgtgacgctggcccgcctcaaccgcgaggcctcgccggaggccgtggcgcgaaggctg
acggaggcgggggtgtttccccgtctgaccttcacggcgcgccgcgcagccctgttctcc
gcccgcacctcgcgcggcggcgggccctacctcgtcgaggcggcctatcccttcgcggat
gcggatttcgagctggacgacgaatag
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