Methylorubrum zatmanii: B2G69_06780
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Entry
B2G69_06780 CDS
T04981
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mza
Methylorubrum zatmanii
Pathway
mza03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mza00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B2G69_06780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mza03019
]
B2G69_06780
03400 DNA repair and recombination proteins [BR:
mza03400
]
B2G69_06780
Enzymes [BR:
mza01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
B2G69_06780
Messenger RNA biogenesis [BR:
mza03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
B2G69_06780
DNA repair and recombination proteins [BR:
mza03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
B2G69_06780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
ARO53879
LinkDB
All DBs
Position
1498239..1500086
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AA seq
615 aa
AA seq
DB search
MSRRLDEARAALKKTFGYDDFRPGQDEVIGAVLDGTDVFAVMPTGSGKSMTYQLPALVDA
GLTVVVSPLIALMHDQVQQMHAFGIEAATLNSTIAETVSRETWRKIRSGELRLLFVSPER
LLMDGCMEALRGAGVRRLAVDEAHCVSQWGHDFRPEYREIARAREALGNVQTLALTATAD
AATRAEIAERLFPAGRPPKTFVHSFDRPNIRLTFQPKDNPTRQLERFLRDRRAESGIIYC
SSRKRVEQLADTLKGDGFNALPYHAGLDQGTRARNQDTFLQEDGVVMTATIAFGMGINKP
DVRYVCHSDMPTNIEGYYQEIGRAGRDGLPSDTLTLYGLDDMALRRRQIDEKEISEERRR
VERRKLEAMIALCEGAACRRQSLLGYFGEASERCGRCDLCRGGISLIDGTVAAQKLLSAI
VRTGQRFGAAYVCDVVHGKESESIRRNGHAALKTFGVGNDKPVAAWRALLRQLFAAGAVA
ENTDGYGGLVMTEKGEAILFGRETIEVRPDPEPKKAEPRSRRATPRDDEANALSEADEAL
FQHLRGLRATIARAEGIAAFMVFPDRTLIEMARAKPVDLWALRTVHGVGERKREAYGERF
TDTIREFLADAKRAG
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgtctagacgcctcgacgaggcccgcgccgcgctgaaaaaaaccttcggctacgacgat
ttccgtcccggccaggacgaggtgatcggcgccgtgctcgacggcacggacgtgttcgcg
gtgatgccgacgggctcgggcaagtcgatgacctatcagttgcccgctctggtcgatgcc
gggctcaccgtcgtggtctcgccgctgatcgcgctgatgcacgatcaggtgcagcagatg
cacgccttcggcatcgaggccgcgaccctcaactcgacgatcgcggagacggtgtcgcgg
gagacgtggcgcaagatccgctccggtgagctgcggctgctgttcgtctcgccggaacgt
ctgctgatggacggctgcatggaggccctgcgcggggccggcgtgcggcggctcgcggtg
gacgaggcgcattgcgtctcgcaatggggccacgatttccgccccgaataccgcgagatc
gcccgcgcccgcgaggcgctcggcaacgtgcagaccctggcgctcaccgccaccgccgac
gctgcgacccgcgccgagatcgccgagcggctgttcccggcgggacgccctccgaaaacc
ttcgtccactccttcgaccggcccaatatccggctgaccttccagcccaaggacaacccg
acccgccagttggagcgcttcctacgcgaccgccgcgcggagagcggcatcatctactgc
tcctcgcgcaagcgggtggagcagctcgccgacacgctcaagggggacggcttcaacgcc
ctgccctaccatgccgggctcgatcagggcacgcgggcgaggaaccaggacaccttcttg
caggaggacggcgtggtgatgaccgccacgatcgccttcggcatgggcatcaacaagccg
gatgtgcgctacgtctgccactccgatatgccgaccaacatcgagggctactatcaggag
atcggccgcgccggccgcgacgggctgccctccgacaccctgaccctctacggcctcgat
gacatggcgctgcgccgccgccagatcgacgagaaggaaatctcggaggagcgccgccgg
gttgagcggcgcaagcttgaggcgatgatcgccctgtgcgagggcgctgcctgccgccgc
cagtcgctgctcggctatttcggcgaggcgagcgagcgctgcgggcgctgcgatctctgc
cgcggcggcatctccctcatcgacgggacggtggcggcccagaagctgctctccgccatc
gtccgcaccgggcagcgcttcggcgcggcttatgtctgcgacgtggtgcatggcaaggag
agcgaatccatccgccgtaacggccatgccgcgctcaaaaccttcggcgtcggcaatgat
aagccggtggcggcgtggcgcgccctgctgcgccagctcttcgcagccggagcggtggcg
gagaacaccgacggctatggcggcctcgtgatgaccgagaagggcgaggccatcctgttc
ggccgcgaaacgatcgaggtcaggcccgatccggagccgaagaaggccgagccgaggagc
cgccgtgccacgccgcgcgacgacgaggcgaatgcgctgagcgaggcggacgaagcgctg
ttccagcacctgcggggccttcgcgccaccatcgcgcgggcggaaggcatcgccgccttc
atggtgttccccgaccgcaccctgatcgagatggcgcgcgcgaaacccgtcgatctctgg
gcgctccgaaccgtccatggcgtcggcgagcgcaagcgcgaggcctatggcgagcgcttc
accgacacgatccgtgaattcctggccgacgcgaagcgcgccggctga
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