Methylorubrum zatmanii: B2G69_19920
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Entry
B2G69_19920 CDS
T04981
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
mza
Methylorubrum zatmanii
Brite
KEGG Orthology (KO) [BR:
mza00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mza03016
]
B2G69_19920
Enzymes [BR:
mza01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
B2G69_19920
Transfer RNA biogenesis [BR:
mza03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
B2G69_19920
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ARO56177
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All DBs
Position
4327379..4328008
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AA seq
209 aa
AA seq
DB search
MAAAPSRIRLHHGDLPPDFAPGAAIAIDTETLGLNPHRDRLCVVQVSRGDGSADVVQIRP
GDPAPERLMAILADAGVVKIFHFARFDLAVLFNAFGVMPAPVYCTKIASKLARTYTDRHG
LKDVVRELVGVDLSKQQQSSDWGAGTLSQAQIDYAASDVLHLHAARERLDAMLAREGRTE
MAQACFDFLPTRSKLDLAGWPEIDIFAHA
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgccccctcccggatccgcctccaccacggcgacctgccgcccgatttcgcg
ccgggcgcggcgatcgcgatcgataccgagacgctggggctcaacccgcatcgcgaccgg
ctctgcgtcgtgcaggtgtcccgcggcgacggcagcgccgatgtggtgcagattcggccc
ggtgacccggcgccggagcggctcatggcgatcctggccgatgccggggtcgtcaagatc
ttccacttcgcccggttcgatctggcggtgctgttcaacgcgttcggcgtcatgcccgct
ccggtctactgcacgaagatcgcttcgaagctcgcccgcacctacaccgaccgtcacggc
ctcaaggacgtggtgcgcgagctcgtgggcgtcgatctctccaagcagcagcaatcctcc
gattggggcgcggggaccctgagccaagctcagatcgactacgcggcatcggacgtgctc
cacctgcatgccgcccgcgagcgtctcgacgctatgctggcccgcgagggccgcaccgag
atggcgcaggcctgtttcgacttccttccgacccgatccaagctcgatctcgccggctgg
ccggagatcgacatcttcgcccacgcctga
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