Maylandia zebra (zebra mbuna): 101463794
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Entry
101463794 CDS
T02814
Symbol
col7a1
Name
(RefSeq) collagen alpha-1(VII) chain isoform X1
KO
K16628
collagen type VII alpha
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
101463794 (col7a1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
VWA
fn3
Kunitz_BPTI
VWA_2
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
fn3_2
Motif
Other DBs
NCBI-GeneID:
101463794
NCBI-ProteinID:
XP_004544903
LinkDB
All DBs
Position
LG5:complement(16007784..16072329)
Genome browser
AA seq
3079 aa
AA seq
DB search
MWSWVFTVTVLLCSVKHAEAQDRCDNVQAADIVFLVDGSSSIGRPNFLQVKGFMAGIVKP
FASSVGESGIRFGVAQYSDTSRVEFTLTAYLNGTELVNAVQNINYKGGNTRTGDGLKFAS
DNFFNPASVRDVPKIMILITDGKSQDNVNEPAQKLRSQGVHVFAVGIKSADRNELAQISS
QPSSDFTFFVGDFKLLNTLLPLVNAQVCTKAGGDYASDEAFVGPSNLQFIGQTSDSLRFR
WSPAGGPVSAYVIQHVPLTGLGQPVIAEMRQDSVTANQRTYTARGLRSGTDYLVTVIAQY
PNSVGDSVSAKQRTRSLPGVSSLRLVQAGFFSLTLGWNQPSTPVQGYRITYGPQGQPAAQ
LLERTLSAGSTSVTLESLQPDTEYVISLYPLFPRNSASPSVLNARTLSLEVVQQLSVETE
SEGSVRVRWRGVSGARAYRLVWGPFTGRDVETVEVGGDINFYTLSGVQPDTEYIVTIIPL
YEGNTEASPTTARFKIERQEQQVLRAAITSPSSIRLTWRLIQSSQGYRLEWREGEGGPVR
SLSFPRSTTNSVLTGLKPNTKYIFTLYTLFEGREEATPVSTTFREEQPVGRVSNLRVVEY
LGSTVRLGWTGVAGATQYRVIILNTDSQTEEVRLIPGNQTTLDLRDLIVGVSYGVSVTAL
VGENEGDPVTVNIKPEQVVGRVTNLRVINANSRRIRITWTGVTGATGYRVTWRQGNSAEQ
SRTLGAELTAFTLEGLQPDEALIIGVAAVADQRVGEVATLATQTNPQSGLLSGLRVLDIT
PQRIRITWTLSSRATGYKITWRRDDGVETSRQVDASVSTYTIDGLQPDSAYTVQVSTLTG
SREGTPAVLDVKTEPDQSTVGTVTSLQVQEGRGEVVRVTWVGMQGATSYRVSWRRTDGGE
ERSQLVAGDVTAVDLDQLDPGVQYEVQVMALVQNREGAPVSVSVTTPGDYTPPSLPTTTL
RVVEVTQDSVRLGWSPLQGATGYILRWREESDSGRVLSVTLPASSSSYEVPGLRLGLRYR
FSLQPNFASGLGGESSVVGRPVCALGSLDVVFLVPASTDRINLARPLREFLTNTAESLIT
TGALNTQIGVVVYGSRPKIWFLLNRHARSDTLLQEIQSIPFDESPGSNIGEAVTFTRQYV
LTPSAGRRLRVPGVVVIIADKRSNDDLSLAASSLKATGVKVLAVGVDQADTVELYQAVSD
GNNNLLYTSYPAQLNTLQSNLADLLCGIARAQETTQDTDECTIQCPLGDKGERGEKGERG
RDGADGRKGEPGRDGLPGRDGPRGPEGRPGTPGQSVPIDPSLVVKGEKGERGFPGIDGNP
GLPGRPGAPGNAGVPGSQGLPGVRGNPGEPGTPGPLGPKGDKGERGEPGSVTSGGGGLPG
RKGEPGIPGTDGIPGRLGRDGTKGEPGVPGTRGQDGRPGIPGTPGLSVKGDKGSPGERGP
PGVGSGVAVKGEKGSPGIPGLQGPRGPPGPAGLEGRKGEKGDSAEGQPGPPGKNGEPGDR
GPRGPPGEIGSKGDRGQPGEPGSQGDRGERGPAGETGGRGDSGKPGPPGPAGVRGLPGPS
GPPGEKGNDGARGEPGRTVQGLPGRKGEQGERGVPGPESSKGEKGDPGQRGEKGSPGSGG
SGVAGPKGEPGERGPAGISGRPGAKGDPGEPGERGENGRAGFPGKLGVPGKQGERGEKGD
EGIPGESGLPGKPGERGLRGQTGQPGPPGEKGDIGDPGESGRNGSPGLSGPRGEKGEQGL
QGPQGPPGTVADIQGQLKGERGEKGDAGDPGEHGGKGTKGEAGTPGAPGLRGPEGQRGPP
GTRGDTGDRGPPGEKGERGASGLDGRPGLDGKPGAPGPPGQRGDPGKQGDPGRDGLPGLV
GAQGPPGPVGPAGNPGIPGKAGENGKAGPPGKTGEDGVPGEDGRKGDKGEAGAAGRDGRD
GETGDRGPSGPLGSPGPPGAPGLPGSIGPPGQVVYVKGADATPIPGPQGPPGTPGVPGIP
GAAGTRGERGLPGLKGETGDPGEDGAPGKPGTSVDVQKALAGFGIQVSDLKEAIDSKDTL
SEKGEKGDKGEPGQRGPSGADGARGFSGERGGKGDAGDRGPVGPAGPPGRAIVERGSEGP
AGPAGEPGKPGIPGLPGRAGELGEAGRPGDKGERGEKGDRGDSGRDGLTGPAGPPGQKGE
SADSVLVGSPGARGPPGVSGLKGEPGATGPSGPKGDRGFVGPRGDKGERGEPGEKGRDGS
QGTPGETGKPGQDGKPGSTGPAGPRGQPGNPGEPGIMGPTGAMGPAGLPGPPGVKGNQGE
AGVGVQGPPGAQGSTGLPGPAGPPGAVGPQGPPGLPGQVGEAGKPGVPGRDGVPGKEGIH
GLPGKQGIAGPPGQAGLKGEQGDSGPPGKAVAGPPGPKGERGPPGLTLPGTAGERGPIGE
KGNKGDKGVAGIKGERGQAGESGEPGEDGAQGSPGPKGDKGEKGIGLAGPPGRIGPPGLK
GDPGMPGPAGPPGPAGKTGDSGPPGVRGENGQPGPPGPPGERGLQGFAGRAGNVGPPGPP
GPPGLAGSPGTNGVKGDKGETGVGVPGARGERGDPGPRGEEGRAGLDGERGSSGPPGNRG
ARGEKGDSGPQGDKGEKGDTVLVGGPPGEKGNKGETGDRGPKGIQGEKGVKGQEGPPGEV
GLRGEPGERGSTGFPGARGPGGQKGEAGQPGVPGESGLLGKDGLPGRKGEQGETGNMGIR
GVKGDRGPKGICGGDGPKGEKGNSGANGRSGLPGRKGEQGDIGPSGAPGIPGKEGLVGPK
GDRGFDGIAGPKGAQGEKGERGLPGVPGPPGPRGADGGPGLTGPQGPAGAKGPEGLQGQK
GERGPIGPAAVGPRGIPGIPGERGEAGDMGPDGAKGDRGEAGMTEEEIREYVRSEMSQHC
ACGGSGPNIRYPPVRALPTPEQQLALKGEEGRELHMVVNTNDPDYEHVYSVESYDDPLEE
MFYFTSPSANQSDGEVDRKKSEKTVRVEPNKSASADDQATADGQEAVKVTHLKAVKSRTV
RSKRRVKGEAPADPCLLPMDEGSCGKYTMRWYFNRQAQACRPFIYSGCEGNDNRFLHLEE
CEETCLGEADGSPPFKRAR
NT seq
9240 nt
NT seq
+upstream
nt +downstream
nt
atgtggagttgggttttcactgtaactgtcctgctgtgctctgtgaaacatgctgaagct
caggacaggtgtgataatgtacaagctgcagatatagttttcctggttgatggctcttcc
agtattggccgacctaatttcctgcaggttaagggctttatggctggaattgtaaagcca
ttcgccagctccgtgggcgagtcagggattcggttcggtgttgcacagtacagtgacacc
tcgagagtcgagttcacgttgactgcctacctgaatggcactgagcttgtcaacgctgtc
caaaatataaactataaaggtggaaacacacgcactggtgacggccttaagtttgcctct
gataacttcttcaaccccgcctctgttcgggatgttccaaagatcatgatcctaatcaca
gatgggaagtcacaggacaatgtgaacgagccagcacagaagctgcgcagtcagggagtt
catgtttttgcagttggcataaagagcgcagacaggaatgaactggctcagatctcgtcc
caacccagcagtgattttaccttctttgttggggacttcaaactgctgaacacgctgctt
cctcttgtgaacgctcaagtttgcacgaaagcaggaggcgattatgctagcgacgaggcg
tttgttggtccatccaacctgcagttcataggccagacgtctgactctctcaggttccga
tggagtcctgcagggggccctgtgagtgcctatgtgatccagcacgtgccactcactggt
ctgggtcaaccagtcatagcagaaatgcgtcaggatagtgtcactgccaatcagaggacc
tacactgcacgaggtttaaggtcaggaacagactacctggtgactgtcatcgcccagtac
cccaacagtgtgggagactctgtttctgccaagcaacggaccaggtcattgccaggtgtc
tccagtctgcgcttggtgcaagcaggtttcttttctctcactctgggctggaatcaacct
tcaactcctgtccagggctacagaatcacctacggaccacaaggtcagccggcagctcag
ctgttggagcggacactgtctgcaggctccacatctgtcaccttggagtcacttcagccc
gacacagagtacgtcatcagcctctaccccttgttcccacgaaactctgcatccccgtct
gtcctcaacgcccgcacactgagccttgaggttgtgcagcagttatcagtggagacggag
tcagagggcagtgttcgtgtgcgatggcgaggtgtcagcggtgcgagggcgtaccgtctg
gtctggggaccgtttacaggtcgtgatgtagagaccgtggaggtcggtggtgacatcaac
ttctacacgttgtccggggtccagccagatactgagtacattgttactattatcccactg
tacgagggaaacacagaggcctctccaacaacggccagattcaagatagagcgtcaagag
cagcaggtcctcagagcagctatcaccagtccctcctctatccgcctcacctggagactc
attcagtcctctcaagggtatcggctggagtggagggagggggaaggaggccctgtccgg
agcctgtcctttccaagaagcaccaccaactctgtgctcacaggcctgaaaccaaacaca
aaatatatcttcaccttgtacaccctgttcgaaggtcgtgaggaagccacacctgtctcc
accacattcagagaggaacagccagtgggaagggtttccaacctgcgagtggtggagtat
ctgggcagcactgtcagacttggctggaccggtgtagctggagccacacagtacagagtt
atcatcttgaacactgactcgcaaacagaagaagtacgactcattcctggaaaccagacg
acccttgacctcagagacctgatagtgggggtctcgtatggtgtcagtgtcacggcactg
gtgggagaaaacgaaggagacccggtgactgtcaatatcaaaccagagcaagttgtggga
agggtgactaatctgagagtaataaatgcaaatagtcggagaattcgaattacctggaca
ggtgttaccggagcaacggggtacagggttacttggagacaaggcaacagtgcagaacaa
tcccgtactctgggagcggagctcacggccttcaccctagaaggcctgcagccagatgag
gcactaataattggtgttgcagctgttgctgatcaacgtgttggagaggtggccacgctg
gctactcagaccaatccccaaagtgggttattgtctggacttcgtgtccttgacatcacg
cctcagagaatacgcattacgtggacactttcctcgagggcaactgggtataagatcacg
tggcgccgtgatgatggagtcgaaactagtcgtcaagttgatgccagtgtttctacctac
actatcgatggactgcagccagattcggcttacacagtgcaggtttctacactgactgga
tctcgagaagggactcctgcagttctagatgtcaaaacagaaccagatcagtccacggtt
gggactgtgacatcactgcaagtccaggagggccgcggagaggttgtccgagtcacctgg
gttggcatgcagggagcaacatcttatcgtgtgtcttggaggagaacagatggtggtgaa
gagaggagtcagctggtagctggagatgtgacagcagtggatttagaccagctggaccct
ggagttcagtatgaggtgcaggtcatggctttagtccaaaacagagagggagccccggta
tctgtcagcgttaccacacctggtgattataccccgccttcattgcctaccacaacttta
cgagtggtagaggttacccaggattctgtgcggctaggctggagtcctttacaaggtgcc
accggatatattcttcgttggagagaagaatcagatagtggtcgagtcttgtccgtcacg
ctgcctgcttcatctagctcttatgaggtgcccgggctgcgtttgggccttcgatatcga
tttagcctgcaacccaactttgcaagtggactaggaggggaaagctctgtagttggacgc
cctgtgtgtgcgcttgggtctctagatgtggtgtttctggtacctgcgtccactgatcgt
attaatcttgcaagacctttacgtgaattcctcacaaatacagcagagtctctcataact
actggagccctcaacacacagattggggttgtagtatatggttctagacccaaaatatgg
ttcctgctcaatcgccatgccagatctgacacccttcttcaagagattcagtccataccc
tttgatgaaagcccagggagcaacatcggtgaggcggtaacattcaccagacaatatgtc
ctgaccccatcagctggacggagactaagggtccctggtgttgttgtcatcatcgctgac
aaacgttccaatgacgacctgagccttgcagccagcagtctcaaagctacaggtgtgaaa
gtcctagctgttggtgtcgaccaggcagacactgtggagctgtatcaggctgtgtcagat
ggcaacaacaacctcttgtatacaagctatccagcacagctgaacacgctacaatctaat
ctagccgacttgctctgtggtattgccagagcgcaagagactactcaagatacagatgag
tgcaccattcagtgccctctgggtgacaagggagaacgtggagaaaagggtgagagaggc
agagatggtgcagatggacgcaagggagagcctggtcgtgatggtttgcctgggagagat
ggccccagaggccctgaaggtcgtccaggaacaccaggccaaagtgtcccaattgaccct
tcgctagtggtaaaaggagaaaagggagagcgaggttttcccggtattgatggaaatcca
gggttaccagggcgaccaggtgcccctggaaatgcaggtgttcctggttcacaaggctta
cctggtgtcagaggaaacccaggtgaaccaggaacaccaggaccactggggcccaagggt
gataaaggtgaaaggggtgaaccaggttctgtgacatctggtggtgggggtcttccaggg
aggaaaggagaaccaggcattccaggaacagatggtataccaggtcggctaggcagggac
ggcaccaaaggagaacctggagttccagggacacgaggccaggatggtcgcccaggaata
ccaggaacaccagggctttcagtcaagggagacaagggaagcccaggagagaggggacct
ccaggagtaggcagcggggtggcagtgaaaggcgagaagggctcccctggtattccagga
cttcagggacctcggggtcctccaggacctgcaggacttgagggcagaaaaggggagaag
ggtgacagtgccgaaggacaacctggacctccaggcaaaaatggggaacctggggacagg
gggccccgtgggcctccaggagaaattggcagcaagggagacagagggcaaccaggtgag
cctggatcacagggagataggggggagagaggaccagctggtgaaactggaggaagagga
gattcagggaagccaggccctccaggaccagcaggtgtaagaggtttaccaggacccagt
ggaccgccaggagaaaagggaaatgacggtgcacgaggagagcctgggagaactgttcaa
ggtctcccagggaggaaaggagaacagggggagcgaggcgtacctggccctgagagttcg
aaaggagaaaagggagatccagggcagagaggagagaaagggtctccgggctctggaggg
tcaggtgttgcaggacctaagggagagccgggagagcgagggcccgctggtattagcgga
aggccaggtgccaagggagatccaggtgaaccgggagagaggggagaaaatggacgcgca
ggattcccaggaaagctaggcgttcccggtaaacagggggagagaggagagaagggtgat
gaaggcattcctggtgagtctggacttccagggaagccaggagaaagaggactgaggggt
cagactggtcagccagggccaccaggcgagaaaggagacataggagaccctggagagagt
ggacgaaatggcagccctggactgtctggaccacgaggagagaagggagaacagggactt
caagggccccaaggaccaccaggaacagtggctgatatccagggccagctgaaaggagag
agaggagaaaagggtgatgctggtgacccaggagagcatggcggcaaaggcacgaaaggc
gaggcggggactcctggagctccaggcctacgaggtcctgagggacaacgggggcctcca
gggacaagaggcgacacaggagacagaggaccacctggagagaagggagaacggggagca
tctggcttagatgggcgtcctggtcttgatggtaaaccaggggctcctgggccacctggc
cagaggggtgatcctgggaaacagggagatccagggagggatggattacctggactagta
ggggcgcagggtcccccagggcctgttggacctgcaggcaatccagggatacctggtaaa
gcaggtgaaaatggcaaagctggaccacctggcaaaacgggcgaggatggcgtgccaggt
gaagatggtagaaagggtgacaaaggagaagctggagcagctggaagagatggccgtgac
ggggagacaggagaccgtggtccttctgggcctttaggctcccctggtcccccaggagca
cctggattacctggcagcattggtcctcctggtcaggttgtgtatgtgaaaggagctgac
gcgacaccaatcccaggtccacaggggcccccaggaacacccggtgtcccaggaatccct
ggagctgcaggaaccagaggagagcgaggtctgcctggcctgaaaggtgaaactggagac
ccaggagaggatggagcacctggcaaacccgggacgtcagtggatgtacagaaagctctg
gcaggctttggtattcaggtgtctgatctgaaggaggctatcgacagcaaggacacactt
tcagagaaaggtgaaaagggagataagggtgagcctggacagagaggaccatctggagca
gatggtgctcgtggtttttctggagagaggggcggcaaaggagacgcaggggaccgagga
cctgtgggaccagcggggcctccaggaagagccattgtcgaacgagggtcagagggacct
gcggggcctgctggggagcctggcaagccagggataccaggtcttcctggacgagctggg
gaactaggagaggcaggaaggccaggagataagggggaaagaggagagaaaggtgacaga
ggagattctggtcgggatggattaacaggaccagctggcccgccaggtcaaaagggagaa
tctgctgactcagtcctggttgggtctcctggggctagaggccctcctggagtatctggg
ttgaagggagaacctggtgctacaggaccgtcaggacctaaaggagaccgcggtttcgtg
ggacctcgaggtgataaaggtgagagaggagagccaggagaaaaaggccgtgatggctca
cagggaacaccaggagagactggaaaaccgggccaggatgggaaaccgggttcaacaggg
cctgctggtcctcgaggccaaccaggaaacccaggagagccaggcattatggggccgact
ggtgccatgggtcccgctgggctgccaggtccacccggtgtaaagggtaatcaaggagaa
gcaggtgttggtgtacagggtcctcctggtgcacaggggagcacaggtctgccaggacca
gcaggtcccccaggagctgtgggtccacaggggcctccgggactgccagggcaggtgggt
gaagcaggaaaacctggtgttcctggaagagatggggtgcctggcaaagaaggaatacat
ggattaccaggaaagcagggcattgcaggacctccaggccaggctgggctgaagggggag
cagggagacagcgggcctccagggaaggctgtggctggacctcctggacccaaaggagag
aggggtcctcctggtttaacgctgccaggcacagctggagagagaggtccaattggtgaa
aagggtaacaagggagacaaaggtgttgctggcatcaaaggagaaagaggacaagctggt
gaatcaggagaacctggagaagatggggcacagggatctcccgggccaaaaggcgataag
ggagagaaagggataggacttgcaggtcctcctggtcggattgggcctccaggtttaaag
ggggatccagggatgcctggtccagctggtcctccaggtcctgcagggaaaacaggagac
agtgggccacctggtgtgagaggagaaaatggacaaccaggacctcctggacccccggga
gagaggggtctccaaggctttgctggccgtgcaggaaatgttggtccccctggtcctcct
ggacctcctggattggcaggatctcctggtactaacggggtcaaaggagacaagggggaa
actggtgttggcgtccccggtgcgagaggtgaaagaggagatccagggcccagaggcgag
gagggtcgagctggattggatggggagagaggatcatctggtcctccagggaatcgtggg
gctcggggagagaagggagacagcgggccgcaaggtgacaaaggagagaagggggacact
gtgctggtgggaggacctcctggagaaaagggcaacaaaggagaaacaggtgacagagga
cccaaaggtatacaaggagaaaagggggtaaaaggtcaagaaggtccaccaggagaagtg
ggtttgagaggagaacctggagaacgaggatctaccggtttcccaggtgccagaggacct
ggtgggcagaagggagaagcaggccaacctggagtacctggtgaatcgggattactggga
aaagatggactgccagggcgtaagggtgaacagggagagactggcaacatgggaataaga
ggagttaagggtgaccgaggacccaagggaatttgtggaggcgatggacccaagggagaa
aagggaaattctggtgccaatggaagatcaggcctaccagggagaaagggtgaacagggg
gacatcggaccttctggggccccggggatccctggaaaagagggactagttggtcccaag
ggtgaccgtggttttgatgggattgcaggacccaaaggagctcagggagagaaaggtgaa
aggggtttacctggtgtacctggtcctccaggtcccagaggggcggatggaggccccggc
ttgaccggcccacaagggccagctggtgctaagggccccgaggggctccagggacaaaag
ggggagagaggtccaattggccctgccgcagttggtccgcgtggtatcccaggaatcccg
ggagagcgaggagaggcgggagacatgggcccagatggagccaagggagacagaggagag
gcaggcatgacggaggaagagatcagagagtatgttcgctcagagatgagtcagcactgt
gcgtgcggaggttcaggtccgaacattcggtacccgccagtcagggctctgcctacacca
gagcaacaattggcgctgaagggtgaggagggccgtgaactgcacatggtggtaaatacc
aacgacccagactacgagcatgtctactccgtcgaatcctatgacgaccccttggaggag
atgttctacttcacgtctccctcggccaaccagagtgatggtgaggttgacagaaagaaa
tctgagaaaacagtcagagttgaacctaacaaatcagcaagtgctgacgatcaggcaaca
gctgatggtcaggaagcagtcaaagttacacatctgaaagcagtcaagtccagaacagtc
aggtccaagaggagagtcaaaggggaagctccagcagacccgtgcttgctgcccatggat
gagggaagctgtggaaagtacactatgcgctggtattttaacagacaggctcaagcctgc
aggcccttcatctacagcggctgtgaaggaaatgacaaccgtttccttcacctggaggag
tgtgaagagacctgtcttggggaggctgatggttctcctccctttaagagagcgcgatga
DBGET
integrated database retrieval system
