Maylandia zebra (zebra mbuna): 101463810
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Entry
101463810 CDS
T02814
Symbol
vps50
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
mze
Maylandia zebra (zebra mbuna)
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mze04131
]
101463810 (vps50)
Membrane trafficking [BR:
mze04131
]
Protein recycling
Others
EARP complex
101463810 (vps50)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
101463810
NCBI-ProteinID:
XP_004547985
UniProt:
A0A3P9BKX9
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Position
LG22:19385531..19509607
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AA seq
993 aa
AA seq
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MQKIKSLMARQGLKSPQESMADLSPVENLRIPSKEELRELREQPIDPQAEQEIIDSIEEV
YFSNDSFDMVQHELEKLPPELNLQELEEYRDKLKRQQAAVSKKVADLILEKQPAYVKELE
RVTALQTNLQLAAVICTNARRQLSVAKEGFTEASLGLLANQRRRQLLTGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKTCKHFDVSHYTKVQLAYTLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNA
DTKFQKMQYKDLCTHITPDSYIPCLTDLCKALWEVMLSYHHTMQWHEEHDKQETTPTPED
AAAAESDELAVDRSYVKKKLEHGLTRIWQDVQLKVKAYILGTDMSNFKYDDFIVVLDVIS
RLMQVGEEFCGSKSEVLQESIKRQSVNYFKNYHRARLEELRMFLENETWELCPVKSNFNI
AQLHEFKFMGQCRSPSVSPSRQAASLSSSAQEELSLFQQYQREGNPFEMHMEHKEEETED
VLASNGYESDELEKSVYQDYDSDSDVPEELKQDYVDEQTGDAPLKSVPRETMRTKKKSDY
NLNKTNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHCVSQLFDYYLYAVYTFFGRN
DMPVPSPSLQAHGSREAGTARVVGPACLYESSGLGLISSRLRTTLNRIQESLIDMEAVGE
NAGVHGPAEDRKEKVPSPHLSQLVVLTNSGTLYGLAQRVVATESLVFLAEQFESLQSHLD
AMMPAAKKPFLQQFYSQTVSTASELRKPIYWIVAAKAIDYEQMLLMMAGVKWDIREIMSQ
HNVYVDVLLKEFEQFNKRLGEVSRHVRIPLPVSNVLWEHCIRLANRTLVEGYANVKKCSN
EGRALMQLDFQQFLMKLEKLTDLRPIPDKEFVETYIKAYYLTENDMEQFIKNHREYSMKQ
LANLVNVCLGSHINKKARQKLLAAIDDIDRPKR
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagatcaagtctcttatggcccgtcagggcctgaaaagcccccaggagagcatg
gcagacctcagtcctgtggagaacctgagaatcccgagcaaggaggagctgcgggagctg
agggagcagcccatcgacccccaggcggagcaggaaatcatcgacagcatcgaggaggtc
tacttctcaaatgactccttcgacatggtgcagcatgaactggagaaactcccgcccgag
ttgaacctgcaggagttggaggaatacagagacaaacttaaaaggcaacaggcagcagtt
tccaaaaaggtcgccgatctcattctggagaaacagcctgcttatgtgaaggagctagag
agagtgacggcgttacagaccaacctgcagctggcagcagtcatttgcactaatgcaagg
aggcaactgagtgtggcaaaggagggattcaccgaggccagcctcggtctcctggccaat
cagagaaggcgacaactgctaacaggcctgctcaagtctctgaggaccatcaagaccctg
caaagaacagatgtaagactcagcgagatgcttgaggaggaagattatccaggtgcaatc
cagctgtgtctggaatgtcagaaggccgccagcacctttaaacactacagctgcatcagc
gagttgaattccaaactacaagacactctggagcagatcgaggagcagcttgacgtcgct
ctgtcgaagacttgtaagcacttcgatgtctcgcactacaccaaggtccagctggcctac
acactactggggaaaacacagactgctatggaccagttacacatgcacttcacccaggcc
atccacaacacagtgttccaagttgtgctgggatacgtggagctgtgcgccggcaatgcc
gataccaagttccagaagatgcagtataaggacctgtgcacgcatattaccccggacagc
tacattccctgcctgacagatctgtgtaaggcattgtgggaggtgatgctaagctaccac
catactatgcagtggcacgaggagcatgacaaacaggagaccacacccactccagaggat
gctgctgccgccgagtccgatgagctggccgtggaccgcagttatgtgaagaagaagttg
gagcatggactgacacgaatctggcaggatgtccagttgaaagtgaaggcctacatcctg
gggacagacatgtcgaacttcaaatacgacgatttcatagtggtactggatgtcatcagc
aggttgatgcaggtgggtgaggagttttgtggcagtaagtctgaggtcctgcaggagtct
atcaaacgccagagtgtcaactactttaaaaactaccacagggcccgactagaggagctg
aggatgtttctggaaaatgagacgtgggaactgtgtccagtcaagtctaactttaacata
gcccagctccatgagtttaagtttatgggtcagtgtcgctcgccttcagtttccccgagt
aggcaggccgcgtctttgagcagctcggcccaggaggagctgtccctgttccagcagtac
cagcgagagggaaacccctttgagatgcacatggagcacaaggaagaggagacggaggat
gtgctggcatccaatgggtacgagtcagacgagctggagaaaagcgtgtaccaggattac
gacagcgacagcgatgtcccagaggagctcaagcaggactacgttgatgagcagacgggt
gatgctcctctaaagagcgtaccccgagaaaccatgagaaccaagaagaagtccgactac
aacctcaataagaccaacgcaccaattctcaccaacaccacgctcaacgtcatccggctt
gttggaaagtacatgcagatgatgaacattttgaagccaattgcctttgacgtcatccac
tgcgtatcacagcttttcgactactacctttacgctgtgtacactttctttggacgcaac
gacatgcccgtcccaagcccatctttgcaagctcacggcagcagagaggcgggcaccgcc
agggttgtgggccctgcctgcttgtatgagtcatcaggtctgggccttatcagcagcaga
ctgagaaccacactgaaccggatccaggagagcctcattgatatggaggctgtcggggag
aacgcaggggtgcatggcccagcagaggacaggaaggagaaggtgcccagcccccatctc
agccagctggtggtcctcactaacagcgggactctctacgggctggcacaaagggtggtg
gccacagagtctcttgtgtttctggcagagcagtttgagtccttgcagtcccacttggac
gcgatgatgcctgcagccaagaagcccttcctgcagcagttttattcccagacggtgtct
acagccagcgaactgcggaaaccaatttactggatcgtggcggccaaggccatcgactat
gaacaaatgttgctcatgatggccggagttaaatgggacattagggagataatgtcccag
cacaatgtatatgtggatgtcttgttaaaggagtttgagcaatttaacaagcggctgggt
gaagtttccagacatgtgcgcatccccctgcctgtgtccaacgtcctctgggaacactgc
atccgtttggccaacaggactcttgttgagggctacgctaatgtaaagaaatgcagcaat
gagggccgggccctgatgcagctggattttcagcagttcctgatgaagctggagaagctg
actgacctgcgccccatccctgataaggagtttgttgaaacctacattaaggcctattac
ctgactgaaaatgatatggagcagttcatcaagaatcacagggagtactccatgaagcag
ctagccaacttggtgaacgtttgtctcggctcacatataaacaaaaaggctcgccagaaa
cttctggcagccatcgatgacattgacagacccaagagatag
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