Maylandia zebra (zebra mbuna): 101464139
Help
Entry
101464139 CDS
T02814
Symbol
soga1
Name
(RefSeq) protein SOGA1 isoform X1
KO
K27704
microtubule cross-linking factor
Organism
mze
Maylandia zebra (zebra mbuna)
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mze03036
]
101464139 (soga1)
Chromosome and associated proteins [BR:
mze03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
101464139 (soga1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOGA
SOGA1-2-like_CC
Rsa3
TIMELESS_C
Motif
Other DBs
NCBI-GeneID:
101464139
NCBI-ProteinID:
XP_004554044
LinkDB
All DBs
Position
LG20:8646092..8734458
Genome browser
AA seq
1918 aa
AA seq
DB search
MTKTKEVDVHNSPTHLVFASPKERRLHLRQKMESGGGTECSDSGQMQHAVPGQQPESADL
SAVLSAHTPGQKKKINRAPSPARPKDVPGWSLTKIRGGIGTPTLSVKPGAIHLGSRISRR
SPVGSLAGKDGKGEKSGGGKPAGKSSLSGGMSSKGSASKAIKSTVARRKVSDASIGSDDL
SKDSGCAPGKLSPTDSSSELSDCASEENKLSTDAVSSDAESRSSRGGGPELEKPLRDGAL
ADRTSQQAAAAAAKTTCSSGEKDRLSTGIETGEGSISPGEERSVTSFDSRVPASTSLAFS
DLTEEFMDSMHEEFVREIEELRSENDYLKDEMEELRSEMLEMRDMYMEEDVYQLQELRQQ
LEQANKTCRILQYRLRKAERRSIRVAQTGQVDGELIRTLEQDVKVAKDVSIRLHSQLDSV
EKKRSRLEQENEELRVRLQDLEVAKQVLQQEIDKNSQKKRGARPNNKPDKKLAAQEDSSD
LKCQLHFAKEESALMCKKLTKLVKDSEAMKEELAKYRSLYGDINASLTVEEVADSPHTRE
AEIRVHLKLVEEEANLLSRRIVELEVENRGLRAEMDDMKGPQDGPQELSGVGGGLGAALG
LTAGAMVLGGGASSENVMELQRHLQFVEEEAELLRRSLIEMEEQNKLLMNEINRYKSELP
PPASALSSNSLMSLTDGMLNDSPVHTLQEGSVLISTDTPTQEEELRLATLQIGELSGKVK
KLQYENRVLLSNLQRCDLASYHSPTSSSSSSSLRLALETDAEAGDSAECLPSSPPQRKEP
VGGENDALEIKEQKKKIEDNADATTSLPVCLGQKDHDALLAMRDQARLVSTAIQLLTSPE
SNCLSSSPSIFHKVCNSEAAEPCDLEKPQPHSQISGLSDLADHPLVGALTSRLQALHSQL
QSFVEKVDSQGRTPAGGRDLELEGESPCTSTSCSGDGQDPQNRVEEKQPDFRDQLEPEAN
DETEENSQSDSNELQNQETIQLQHEEKETDGAKLSDLQVRLSEAEESVRGTQEDLKKERQ
GHKEIAVKLTQLQEEHQKAMLRRDFQLQSLGLQARLQKKLWCQERTLLVQESQHLKQALL
LLSLKLRCFLKQWRLGCKKDTEWKDVLEINSLKDLYLLLEEENLPSPTHQTDKRAPADEQ
PLSPTIKSSAVSSTLADLKVALQDLSGELRQERQGSQELTQQFAKAKASWEVERTELKSL
ITQLETKASKSATAMSSTDALDPPDLKVALKREREEHQHLLAESYAAVMDLTKQLQIGER
NWGREKLELLERFSQERAQWEQRLREATAQQGKSKPPSGESSPDSVVANGTGSPSSLVKR
IKSTLELECSEVNGTANQGEKIQLAAPPLFIPSDLGDNTRKNWTCLTNETPKIIDTCKTW
DGPSGSCSRVGSQLDLEPVQRSYTAPDRTGIRIYYSPPTVRRTDHWRRNQEAEEPEHTQN
GSFLLEVNGSDAGVAAVETLDIQRQPASSFSSSYEQWLSSLSNQHRELLESRSSCIARSM
PSVISNTVSGSANNVVDGMSPSSPYHTLEIGEISANLSDDMKEMTNCVRQAIRSSSLERK
SGKEPGSQAVAVSTRSTQTATQYVSIGLQTENLPSSRGTGLHSKVWSPRPSSGATSSLAS
ARTRQISTSLDKVHSRIERPCCSPKYGSPKLQRRVSSGSTSRLNEASSSRDRSLWSLQQR
PIGGGGGSAWARSTTTRDSPVLSGLTDGLSSLFSVVEHTGSTESLWRGDVGPSQTASPAR
HLPAAGKPSGVAVCGSDPSSQRYGGVVQEFFRNVCSSRSPGGAPLSGESAQRESLGNLGS
LGVFSSVDEPKPECVSMAVGGLGTLAGLGGGNDSVTRIVNKRFMRQTAGEEMISIMGGGK
ETVSNAVATGSGTEDAPCDCAAQSACFARPSRASTRHCKHRPQESLPTTEEKADTNNE
NT seq
5757 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaacaaaggaggttgatgtccacaactctccgactcacctcgtcttcgcctcg
cccaaggaacgaagactccatctccggcagaagatggaaagcggaggcgggacggagtgc
tcggatagcgggcagatgcagcacgcggtgcccggtcagcagcccgaatctgcggacctt
tctgctgtgctgtccgctcacactccaggccagaagaagaagatcaaccgggccccatct
ccggcgagaccgaaggatgtacccgggtggtcgctcacgaagatccgaggagggattggg
accccgaccctgagtgtcaagccaggagccattcatctgggtagccgcatatccaggcgc
agccccgtgggaagtcttgctgggaaggacggcaaaggggagaagagtggtggcggaaaa
cccgccggcaaatcctccctctctggtggcatgtcctccaagggctcggcgtccaaggcc
atcaaaagcaccgtagcgcggaggaaggtgtcggacgccagcataggatccgatgattta
tccaaggattctggatgcgccccggggaagctctctccaaccgacagcagctccgagctg
tcggactgcgcctctgaggaaaacaagctgtccacggacgctgtgagcagcgacgccgag
tcgaggagtagcaggggcggcgggccggagttagagaagccgctcagggatggcgcgttg
gcggacagaaccagccaacaagctgctgctgctgctgctaagaccacctgctcctccgga
gagaaggaccggctctccaccggtatcgagacgggagaagggagcatatccccgggcgag
gagcgatcggtcacctcatttgatagccgggtgcccgccagcacatctctggctttctca
gacctcacagaggagtttatggacagcatgcacgaggagtttgtcagggaaatagaagag
ctgagatctgagaatgattacctcaaagatgagatggaggaattgagatctgagatgctg
gagatgagggacatgtacatggaggaagacgtttaccagttgcaggaactgcggcaacag
ctggagcaggcaaacaagacctgccgcatcctgcagtaccggctgaggaaggcagaacga
cgctctatccgcgtggcccaaacaggacaagtggatggagaactgatacgaacactagag
caggatgtaaaagtggcaaaggacgtgtccatccgtctccacagccagctggacagtgtg
gagaagaagaggagtcgtcttgagcaggagaatgaggagctgagggtccgcctgcaggat
ctggaggtcgctaaacaggtcctgcagcaggagattgacaagaactcccagaagaaacga
ggagcacgacccaacaacaaacctgacaaaaagctcgccgcacaggaggacagttcagac
ctgaaatgtcaactccactttgccaaagaggaatcagccctgatgtgcaagaagctgacc
aaactggtgaaggacagcgaggccatgaaggaggagctggccaagtacaggtcgctctac
ggagacatcaatgcctccctcactgtggaggaggttgctgactccccccacacccgtgag
gcagaaatcagagtccacctaaagttggtcgaggaggaggctaacctactgagtcgacgc
attgtggagctggaggtggagaacagggggctacgggctgagatggacgacatgaagggc
ccgcaagatggtcctcaagagctcagtggtgttggcggcggtcttggggcagcgcttggc
ctcacagcaggggccatggtgcttggcggcggggcttcatctgaaaacgtcatggagctc
cagagacacctgcagtttgtggaggaagaggcagagctgctgaggaggtctctcattgag
atggaggaacaaaataaacttctgatgaacgagataaaccgctataaatctgagctcccg
cctcctgcatccgcgctgtcgtccaactcattaatgtcgctgacagacgggatgctcaac
gacagtccggtgcacacgttacaggaagggtcggtgcttatcagcactgacaccccgact
caggaggaggagctccgactggcgacgcttcagattggagaactaagcgggaaggtgaag
aagcttcagtatgagaatcgcgtgcttctgtccaacctacagcgctgtgatctggcttcc
tatcactctcccacctcttcatcctcctcctcttcattaagactggctctggagacggat
gcagaggctggagactcagctgagtgcctccccagcagtccaccgcagcgcaaggagccg
gtagggggtgagaatgacgcccttgagattaaggaacagaaaaagaagattgaggacaat
gctgacgccacaacatcgctgcctgtgtgcctggggcagaaggaccatgatgccttgcta
gccatgagggaccaggctcgcttggtttctacagctatacagctcctgacctcccccgag
tctaactgcctctcttcatccccatccatctttcacaaggtctgcaacagtgaggcagca
gagccgtgtgatctggagaaaccgcagcctcacagccagatctcagggctgtctgatctg
gccgaccatcctctcgttggtgctctgaccagcaggcttcaggccctgcacagccagctt
cagtcctttgtggagaaagtagacagccagggtaggaccccagcgggtggcagggacctt
gagttggaaggggagtcgccttgcacctccacctcctgctctggagacggccaggatcca
cagaacagggtggaggagaagcagcctgattttagggaccagttggagccagaagcaaat
gatgaaaccgaggagaacagccaatcagacagcaacgagttgcaaaatcaggaaaccatc
cagctgcaacatgaggagaaggagacagatggtgcaaagctcagcgatcttcaggttcgg
ctctcagaagcggaggagtcggttcgaggaactcaggaggatctgaaaaaagagaggcag
ggtcataaagaaattgctgttaaactcacacagctccaggaggagcatcagaaagccatg
ctccgacgagacttccagctacagagtctgggtctccaggcgcggcttcagaagaagttg
tggtgccaggagaggactctgctggtccaggagtcgcagcacctcaaacaggccctttta
ctgctcagcctcaaactacgctgcttcctcaaacagtggaggcttggctgcaagaaagac
acagagtggaaggacgtcctggagataaacagcctgaaagatctctacctgctactggaa
gaggagaacctgccgagccctacccaccagactgacaagagagctcctgcagacgaacag
ccactcagcccgactataaagtcgagcgctgtgagcagcactttggcagacctaaaggtc
gcgctgcaggacctaagcggagagttgcgacaagagagacaaggctcacaggaactcact
caacagttcgcaaaggccaaggcatcatgggaagtggagaggaccgaactaaagagcctc
ataacacagctcgagaccaaagccagcaaatcagcaacagccatgtcctccactgacgca
ctggaccctccagacctaaaggtggcactgaagagggaacgcgaagaacatcagcatctg
ctggctgaatcctacgcagcagtgatggacctaactaaacagctccagatcggtgagagg
aactggggcagagagaagctggagctgctggagagattcagccaggagagagctcagtgg
gagcagcgactgagagaggcaactgcgcagcaggggaagtcaaagccaccgagcggtgaa
tcgtctccggactcagtcgttgctaacggaacggggtcaccaagctcattggtgaaaagg
atcaagtccacgttagagctggagtgctcggaggtcaacggaacagccaatcagggggag
aaaatacagcttgctgccccgcctcttttcattccctctgatctgggcgacaacaccaga
aaaaattggacctgcctaaccaatgagacccctaagatcattgacacctgtaaaacgtgg
gatggtcccagcggctcctgcagtcgagtaggatcacagctggacttggagcctgtgcag
aggagctacactgctccagaccgcactggcatccggatctactacagccctcccaccgtg
agacgcactgatcactggagaaggaaccaggaggccgaagagccagagcacactcagaac
gggagcttcttgctggaggtgaatggctcagatgccggcgtagctgcagtggaaaccctg
gacattcagcgtcaacctgcatcctccttttcgtcctcctatgagcagtggctgagctcc
ctgtccaaccagcacagggagctgttggagagcagaagcagctgtattgccagatcgatg
cccagcgtcatcagtaacactgttagcggctcggctaacaatgtggttgatgggatgtcg
ccctcttctccttatcacaccctggagatcggagagatttcagccaatttaagtgacgac
atgaaggaaatgaccaactgtgttcgacaggccattcgctcttcatctttggagagaaaa
tctggcaaggaacctgggagtcaggcagtcgctgtgtccaccaggtccacacagactgca
acccaatacgtcagcattggtcttcaaactgagaaccttcccagcagcagaggcaccggg
ttacattccaaagtctggtctcctcgtccctcttcaggagccacttcctctttggcatcc
gcaagaactcggcagatatccacatcactcgataaagttcacagccgcatcgagaggccg
tgctgctcgcccaaatacggatcaccaaaactacaacgcagagtgtcttctggctctacc
tccagactgaatgaggcttcctcctccagagaccgcagcctatggagcctccagcagaga
cccattggtggtggtggaggctcagcctgggctcgctccaccaccacccgagacagcccc
gtcttgagcggcctcactgatggcctctccagcctattcagtgttgtggaacacactggg
agcacagagtccctgtggaggggtgacgtaggaccaagccagactgctagcccagctcgg
caccttcctgccgcaggaaaaccctcgggggtggcggtgtgtggatcagaccccagttct
cagcggtacggtggcgtggtccaggaattcttcaggaatgtctgcagcagccgtagccct
ggaggagcccccctgtctggggaaagcgcccaaagagaatctctcggcaaccttggaagt
ttgggtgtcttcagcagcgttgatgagcccaagccagagtgcgtgtcaatggctgttggg
ggacttggcacgctggctgggttgggtggaggcaacgacagcgtgaccagaatcgttaat
aagaggtttatgagacagacagctggggaggagatgatcagcatcatgggaggaggcaag
gaaaccgtgagcaacgccgttgctactggatcagggacagaggatgcaccctgcgactgc
gctgcccagtctgcctgctttgccagaccatcaagagcatccactcgtcactgcaagcac
cgtccacaagagtctttgcctacaacagaggagaaggcagacaccaacaacgagtga
DBGET
integrated database retrieval system