Maylandia zebra (zebra mbuna): 101464186
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Entry
101464186 CDS
T02814
Symbol
pcdh20
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
101464186 (pcdh20)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mze01009
]
101464186 (pcdh20)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mze04515
]
101464186 (pcdh20)
Protein phosphatases and associated proteins [BR:
mze01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
101464186 (pcdh20)
Cell adhesion molecules [BR:
mze04515
]
Cadherins
Protocadherins
101464186 (pcdh20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_FAT4_N
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
101464186
NCBI-ProteinID:
XP_004543419
UniProt:
A0A3P9B7Q0
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All DBs
Position
LG1:complement(24654323..24658426)
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AA seq
889 aa
AA seq
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MFNSRHPRLSKRGRIWGLCILLLYTNPLSCLANFSQAKELIYKIKEGLPRGTFIGAIGVD
LNLDFSVDPPFIFSLAQKKVSEQYVNLNNTTGELYTSATEIDRETLCADNLEGQGCVLSL
DVFVLPQQYFQLVKVKILIEDVNDNRPKFPTDEIAMSVPENAPINARYAVEQSAVDPDLG
PHGVQTYWLVNDFGMFTLDVEENEGGELTPFLIVTEALDRETQAEYITDIIAEDGGTPPL
LGAATLKIVITDVNDNCPQFKESQINVTLHGNTTKGVHLARLHAFDPDLGANAQISYAYS
ERVPRDTRSLFHLDKITGVIKLAGKIDTGTATFYKLTVLATGPGCIPAVATVIVHIIKVV
TGPPTLIPRYIAPEKDGVVTIKESEPAFSPIAFFTVKNIDKNQRVDCYLEGPGPFRLSPY
QLFKNEYLLETTEPLDFERTQEYDLILVANSTRGIVIKTFLKVQVLDENDNAPVFQQSLV
EISVEENNPPNTFLTQLQASDQDSESRGEVLYLLGGDAPGIFVVDRVTGILTVATSLDRE
EKETYRFIVRAVDQGTPRRESIATVVVTVQDRNDNSPRFINKDFTFFVPENFPGYGEIGV
LSVTDADAGENGWVALSILNGSDIFMIDTGRGALRAKTSLDREQQGTYQLWIEAVDGGEP
ALSSVTIVTVLLLDVNDNPPIVLFPQSNQSYMLVLPNTVPGTSITEVYAVDKDTGMNAVI
AYSIIKRKGGEPGSFAIDPETGNITLKRELSNRGLYSLLVKVSDHGQPEPLYSTVMVNFF
VNETVSNESYIQSLLTREADIEVEERPWYIGQMAEGPERYEPFPCQPVLIALSVTCLGLF
FLVVTLTSYICCRRFKKNRMKRSEVEIPLKIQNDSMQVVNRKLRQISNI
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacagcagacatcctagactcagcaaaagaggaagaatatggggattgtgcatc
cttttgctttacaccaaccccctttcctgtttggcaaatttcagtcaagcaaaagagctc
atctataagataaaggagggattaccaagggggacttttataggagctattggagtagat
ttaaatttggatttctctgttgaccccccctttatattcagtctcgctcaaaagaaggtc
agtgaacagtatgtgaacctaaataataccaccggggagctttacacatctgctacagag
attgacagggagactctctgtgctgataacttagaggggcagggatgtgtcctctcactg
gatgtgtttgtgctgcctcaacaatactttcagcttgtcaaagtaaagattctcattgag
gatgttaatgacaacaggccaaagttccccacagatgagatcgctatgtctgtccctgaa
aacgcaccaatcaatgctcgctatgcagtagagcaatcggcagttgacccagacctgggt
cctcatggagtgcaaacctactggctggttaatgactttggaatgttcacattggatgtt
gaggagaatgaaggaggtgagctgacgcctttcctcattgtgacagaagctttggaccga
gagactcaggcggaatacattaccgatataattgcagaggatggggggacccctcctcta
cttggtgctgcgactttgaaaattgtcatcacggatgtgaatgataactgtccccaattc
aaagagtcacaaattaatgtcactctgcatgggaataccaccaaaggggtacatttggca
cgtctgcatgcttttgaccctgaccttggtgctaatgctcagatcagctatgcttacagt
gaacgcgtgccaagggacaccaggagcttgttccatttggacaaaattacaggagtgatc
aagctcgcagggaaaatagacactggcacagccacattttacaaactcactgttctggct
actggacctggttgtattcctgctgtagccactgttattgtccatatcatcaaagttgtc
actggaccccctactctcataccccggtacattgcgccagaaaaagatggggtggtaaca
ataaaggaatctgaaccagctttttctccaattgctttttttactgttaaaaacattgat
aagaaccaacgggtggactgttatttggaaggacctggtcccttcaggttgagcccctat
cagctgttcaagaatgaatacctgttggagacaacagagcccttggactttgagaggaca
caggagtatgatcttattttggttgctaatagcacccgtgggatcgttatcaagaccttc
cttaaggtgcaagttttggacgagaatgacaatgcccctgtgtttcagcagtctttggtg
gagatatcagttgaagaaaacaatccgccaaacacttttctcactcagctccaagcgtca
gaccaggacagtgaaagcagaggggaagttctttacctcctcggaggcgacgcccctggt
atttttgttgtggatcgagttacaggtatcctgactgtggccacatcgctggaccgtgag
gagaaagagacataccggttcatcgtgagagcggtggaccaggggacacccagaagggag
tcaattgcaacagtggtggtgaccgtgcaagatcgcaatgacaacagtccacgattcatc
aacaaggatttcactttctttgtgccagagaacttcccaggttatggtgagatcggtgtc
ctctctgtgactgatgctgatgctggagaaaatggctgggtggccctctccatcctgaat
ggcagtgacatttttatgatagacacaggccgaggggcactgagggcaaagacatcactg
gaccgggagcagcaggggacctaccagctatggatcgaggctgttgatggtggggagcct
gctctctcctctgtcacaatagttaccgtgctgctgctggatgtaaatgacaacccacca
atcgtcctctttcctcagtcgaatcagtcttacatgctagtgctacccaacactgtacca
ggaacatcaatcacagaggtgtacgctgtggataaagatacagggatgaatgctgtgatc
gcctacagtatcattaaaaggaaaggcggtgagcccgggtcttttgccattgacccagaa
acaggaaatatcacattaaagagggagctcagcaatcgtggcctatacagccttctggtg
aaggtcagtgatcatggtcaacctgaacctctgtactcaacagttatggttaacttcttt
gtcaatgaaacagtgagtaatgaaagttacattcaaagtctgctgaccagagaggctgac
atagaggtagaggagaggccctggtacattggccagatggcagaggggcctgagaggtat
gagccgttcccgtgtcagcctgtcctcattgctctttcagtgacgtgtctggggctgttc
ttcttggttgtcacgctgacgtcttacatatgctgtaggaggtttaaaaagaacaggatg
aaaagatcagaagtggaaatacctttaaaaattcaaaatgactcgatgcaggttgtgaac
agaaagctcagacagatctctaacatctga
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