Maylandia zebra (zebra mbuna): 101464321
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Entry
101464321 CDS
T02814
Symbol
vps16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog isoform X2
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze04140
Autophagy - animal
mze04142
Lysosome biogenesis
mze04148
Efferocytosis
mze05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
101464321 (vps16)
04140 Autophagy - animal
101464321 (vps16)
04148 Efferocytosis
101464321 (vps16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
101464321 (vps16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mze04131
]
101464321 (vps16)
Membrane trafficking [BR:
mze04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
101464321 (vps16)
Hops complex
101464321 (vps16)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
CC1_STRIPAK
Motif
Other DBs
NCBI-GeneID:
101464321
NCBI-ProteinID:
XP_004575656
UniProt:
A0A3P9B5P9
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Position
LG15:complement(42186806..42200834)
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AA seq
834 aa
AA seq
DB search
MAFITASWNPLGDAFYRKTDLYEMSWSLRDGLRDSLVAAAPYGGPIALLREPQRRSPSSR
PQLEIYSASGGTVASFPWKSGPVVQLGWTVSDELLCIQEDGTVLIYDLFGSFKRHFSMGQ
EVVQSQVMEAKVFHSPYGTGIAIVTSSSRFTLATNIDDLKLRRLPEVPGLQGKPSCWVVL
TQDRQTKVLLSNGPELFILDNTSCTVVCPPGLSPQDGNIVHVSVSFSYKYLALLTDSGHL
WTGLSTLQEKLSDVDTKKTMAPKQMLWCRRPKSQQPSVVLMWDRLLLVVGVCNETIQYPI
EDPCVLVGEMDGVRIISSSNQELLQEVPLVCQDIFKIASMAPGALLLEAHREYEKSSQKA
DEYLREIKEQSMLGEAVRQCVEAAGHEYDTNTQKSLMRAASFGKCFLTDFSPDQFVTTCR
ELRVLNAVRDSSVGLPLTHTQFKQLTLQVLIDRLVYRQFYPLAIEVCRYLKIPDYQGVSR
VLKHWASCKVQQKDLTDDAIARAVCMKVGDSPGVSYSDIAAKAYECGRAELAIKLLDFEA
RSGEQVPLLLKMKRSQLALSKAVESGDTDLVYTVVSYLKNEMNRGDFFMTLRNQPVALSL
YRQFCKLQEQETLKDLYNQDDDHQELANYYVTASYREKRLEGRLSLLQSAVDEYNKAKNE
FAVKTTEDEMRLLRFQRKLDDEKGAGLLGLSLQVTMETLLSLGLHKQAEQLYKDFRVPDK
RYWWLKLKSLAEKEEWDELEKFSKSKKSPIGYLAFVEVCIKCNNKYEAKKYVSKVTPEQK
VKAHLAVGDLEGAADAAIERRNEAEIGAVLSRCSASNSLVIERLNRARAAIAKK
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcatcacagccagctggaacccgctgggagacgccttttaccgtaagacggat
ctgtatgagatgagctggagtctgcgtgatggactcagagacagtctggtggctgcagct
ccatacggaggccccatcgccctgctcagagaacctcagcggcgttctccgagttctcgt
cctcagctggagatctactctgcgtcaggaggcaccgttgccagcttcccctggaaaagt
ggtccagtggtccagctcgggtggacggtctctgacgagctactgtgtatccaggaggac
ggcacggtcctgatctatgacctgtttggatcctttaagagacacttcagtatgggacag
gaagtggtccagagtcaggtgatggaggccaaggtgttccactccccttatggaacaggt
attgccatagtaacaagctcctcccgtttcaccttggccaccaacatcgatgacctgaag
ctccggaggttacctgaagtcccaggtctgcagggaaagccatcctgctgggtagtcctc
actcaggacagacagactaaagtcctgctgtccaacggaccagaactcttcatcctggac
aacacgtcctgcactgtggtgtgtcctccaggcctcagtcctcaggacggcaacattgtc
cacgtgtctgtgtctttcagctataaatacctggctctcctcactgacagtggacacctg
tggacaggcttgtccaccctacaggagaaactgagtgacgtcgacaccaagaagaccatg
gcgcccaagcagatgttgtggtgtcgcagaccaaagagccaacagccatctgtggtgttg
atgtgggacagactgctcctggtggtcggggtgtgtaatgagaccatccagtatcccatt
gaggatccatgtgttttggtgggagagatggatggagttcgaataatcagctcgtccaat
caggagctgctgcaggaggttcctctggtctgtcaggacatcttcaagatcgcctccatg
gcgcctggagctctgctgttggaggcccaccgggagtacgagaaatcgagtcagaaggcg
gacgagtacctgcgggagatcaaggagcagagcatgctgggagaagcagtcagacagtgc
gtggaggcggcaggtcacgagtatgacaccaacacccagaaatccttgatgagggcggcg
tcctttgggaagtgcttcctcacagacttcagtccggatcagtttgtgacgacctgcagg
gagctgcgagtgctgaacgccgtcagagacagcagcgtagggctgccactcacgcacact
caattcaaacagctgactctacaggtgctgattgacaggttggtgtatcggcagttttac
ccattagccatcgaagtctgtcgttacctgaagatccctgattatcagggagtcagccga
gtcctcaaacactgggcgtcatgcaaggtgcagcagaaggacctaacagacgatgccata
gcacgagcagtgtgtatgaaagtgggagactcacctggggtttcgtactcggacatcgca
gctaaagcttatgaatgtggacgagcagagctcgccatcaagctcctggacttcgaggct
cggtctggagagcaggttcctctgctgctgaagatgaagaggagtcagctggctctcagt
aaagctgtagagagcggagataccgacttggtgtacacagtggtgtcgtacctgaagaac
gagatgaacagaggagatttcttcatgactctgaggaaccagccggtcgctctcagcctt
tacagacagttctgtaagctacaggagcaggaaactctgaaggacctgtataaccaggac
gatgaccaccaggaactggccaactattacgtcactgcaagctacagggaaaagaggttg
gagggccggctgtctcttctgcagagcgctgtcgatgagtacaacaaggccaagaatgag
tttgcagtaaagaccacagaggacgagatgcgtctgctccgttttcagcgcaaactggac
gatgagaaaggggcggggcttcttggactgtccctacaggtgaccatggagacgctgttg
tcattaggactccacaaacaggcagagcagctttacaaagacttcagagtacctgacaaa
aggtattggtggttgaagttgaagtctctggcggagaaggaggagtgggatgagttagag
aagttctcaaagagtaagaagtctcccattggctacctggcgtttgttgaagtttgcatc
aagtgtaacaacaagtacgaggccaagaagtacgtttccaaggtgacgcctgagcagaag
gtgaaggcccacctggccgtcggtgacctggagggggctgcggatgctgccattgagcgc
aggaatgaagctgagattggggcagtcctctccagatgctccgcctccaacagcctggtg
atcgagcggctgaaccgagctcgggccgccattgccaaaaagtga
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