Maylandia zebra (zebra mbuna): 101464637
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Entry
101464637 CDS
T02814
Symbol
polr2a
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze03020
RNA polymerase
mze03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
101464637 (polr2a)
09124 Replication and repair
03420 Nucleotide excision repair
101464637 (polr2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mze03021
]
101464637 (polr2a)
03400 DNA repair and recombination proteins [BR:
mze03400
]
101464637 (polr2a)
Enzymes [BR:
mze01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
101464637 (polr2a)
Transcription machinery [BR:
mze03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
101464637 (polr2a)
DNA repair and recombination proteins [BR:
mze03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
101464637 (polr2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_R
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
101464637
NCBI-ProteinID:
XP_004562767
UniProt:
A0A3P9D2C4
LinkDB
All DBs
Position
LG3:complement(22087761..22100371)
Genome browser
AA seq
1966 aa
AA seq
DB search
MHGPPSGDSACPLRTIKRVQFGIISPDELRRMSVTEWGIKYPETTEGGRPKLSGLMDPRQ
GVIERTGRCQTCAGNMTECPGHFGHIELAKPVFHVGFISKIMKVLRCVCFFCSKLLVDSN
NPKIKDILAKSKGQPRKRLTHVYELCKGKNICEGGEEMDNKFGMEQQETEEDLTKEKGHG
GCGRYQPRIKRSGLELYAEWKHVNEDSQEKKILLSPERVHEIFKRIADEEDIILGMDPKF
ARPEWMIVTVLPVPPLSVRPAVVMQGSARNQDDLTHKLADIVKINNQLKRNEQSGAAAHV
IAEDVKLLQFHVATMVDNELPGLPRAMQKSGRPLKSIKQRLKGKEGRVRGNLMGKRVDFS
ARTVITPDPNLQIDQVGVPRSIAANMTFPEIVTPFNIDRLQELVRRGNSQYPGAKYIIRD
NGDRIDLRFHPKPSDLHLQIGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWSTF
RLNLSVTTPYNADFDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQDTL
TAVRKFTKRDVFLERGEVMNLLMFLSTWDGKMPQPAILKPRPLWTGKQIFSLIIPGHINV
IRTHSTHPDDEDSGPYKHISPGDTKVIVENGELIMGILCKKSLGTSAGSLVHISYLEMGH
DITRLFYSNIQTVVNNWLLIEGHSIGIGDSIADAKTYLDIQNTIKKAKQDVIEVIEKAHN
NELEPTPGNTLRQTFENQVNRILNDARDKTGSSAQKSLSEYNNFKSMVVAGSKGSKINIS
QVIAVVGQQNVEGKRIPFGFKHRTLPHFIKDDYGPESRGFVENSYLAGLTPTEFFFHAMG
GREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDGTVRNSINQVVQLRYGEDGLAGENVE
FQNLATVKPSHKAFEKKFKFDCTNERALRRTLQEDVVKDVMTNAHVQGTLEREFDKMKED
REILRAIFPTGDSKVVLPCNLARMIWNAQKIFRINPRTPTDLHPLRVVEGVHDLSKKLVI
VNGDDPLSRQAQQNATLLFNIHLRSTLCSKRMTEEFRLSTEAFDWLLGEIETKFNQSIAH
PGEMVGALAAQSLGEPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKRPKTPSLTVF
LLGQAARDAERAKDILCRLEHTTLRKVTANTAIYYDPNPQNTVVAEDQEWVNVYYEMPDF
DVTRISPWLLRIELDRKHMTDRKLTMEQIAEKINAGFGEDLNCIFNDDNAEKLVLRIRIM
NSDENKFQEDEEVVDKMDDDVFLRCIESNMLTDMTLQGIEQISKVYMHLPQTDNKKKIII
TEDGEFKALQEWILETDGVSLMRVLSEKDVDPVRTTSNDIVEIFTVLGIEAVRKALEREL
YHVISFDGSYVNYRHLALLCDTMTCRGHLMAITRHGINRQDTGPLMKCSFEETVDVLMEA
SSHGECDPMKGVSENIMLGQLAPAGTGCFDLLLDAEKCKYGMEIPTNIPGISVAGPTGMF
FGTVPSPMSGMSPAMTPWNTGATPAYGAWSPSVGSGMTPGGAGFSPSAASDASGFSPGYS
PAWSPTPGSPGSPGPASPYIPSPGGAMSPNYSPTSPAYEPRSPGGYTPQSPGYSPTSPSY
SPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS
PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS
PTSPSYSPTSPNYTPTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSP
SYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSP
TSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPTYTPTSPKYSPTSPTYSPTSPK
YSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSPAISPDDSDEENN
NT seq
5901 nt
NT seq
+upstream
nt +downstream
nt
atgcacggaccgccctccggcgacagcgcatgcccattgcgcacgatcaagagagttcaa
ttcggcatcatcagcccagatgaacttagacggatgtccgtcacagaatggggaatcaag
taccccgaaacaacagaaggaggacgtccgaaacttagtggccttatggatccgagacaa
ggggtcatagagcgaactgggagatgtcagacatgtgcaggcaacatgactgaatgtcca
ggtcactttggccacatagaactagcaaaaccagttttccacgttggcttcatatcaaag
attatgaaggttcttcggtgtgtctgcttcttttgctccaagctgctagtggattcaaac
aatcccaagatcaaagacatcctcgcaaaatccaaaggacaacccaggaagcgtttgacc
cacgtctacgagttgtgcaaaggaaaaaacatctgtgaaggcggagaggagatggacaac
aaatttggaatggagcagcaggagacggaggaggatctcaccaaggagaagggtcacggg
ggctgtggacgctatcaaccacgcattaaacgctccggcttggagttgtatgctgagtgg
aaacacgttaatgaggactcgcaggagaagaaaatcttgctgagtcctgagcgtgtgcat
gagatcttcaagcgcatcgcggatgaagaagacatcatcttgggcatggaccccaagttc
gcccgaccagagtggatgattgtaactgtgctgcctgtgcctccactgtctgtaaggcct
gctgtagtgatgcagggctcagctcgcaaccaggatgatttgacccacaaactggccgac
atcgtcaaaatcaacaaccagcttaaaagaaacgagcagagtggtgcggctgctcacgtc
atagctgaagatgtgaagctgcttcagtttcatgttgccactatggtggacaatgaattg
ccaggcttgccaagagcgatgcaaaagtctggccgccctctcaagtccataaaacagcgt
ctaaaggggaaggaggggagagtgcgaggtaacctgatggggaagcgtgtggacttctca
gctcgaaccgtcatcaccccagatcccaacctgcaaattgaccaagtgggcgtaccacga
tccattgctgccaacatgaccttcccagaaattgtcacacctttcaatatagacagattg
caagaactggtacgacgaggaaacagccagtatcccggagccaaatacatcatccgcgac
aatggagacagaattgacctgcgatttcacccaaaaccaagtgatcttcatctgcaaatt
ggctacaaggtggagagacacatgtgtgacggggacattgtcattttcaaccgacaacct
acactacataaaatgtctatgatggggcacagggtgcggattctgccgtggtccacattt
cgactcaacctcagtgtcaccacgccctacaatgctgactttgacggcgatgaaatgaac
ctccacctgccacagtcgctggagacgagggcagagattcaagagttggccatggtgcct
cgtatgatcgtcacaccgcagtccaacaggcccgtcatgggtatcgtgcaggacactctg
actgctgttcgcaaattcaccaaaagggacgtcttcttggagaggggtgaagtgatgaat
ctcctcatgttcctctccacctgggatgggaaaatgcctcagccggccattctcaaacct
cgtcccctgtggactggcaagcagatcttcagtcttatcattccaggacacattaatgtg
atccgcacacacagcacccaccctgacgacgaggacagcggtccttataagcacatatca
cccggcgacactaaggttatagtggagaatggtgagctgatcatgggcatcctgtgtaag
aagtccctgggaacatcagctggctccctcgtccacatctcctacctggaaatgggccat
gatatcacccgactcttctactccaacattcagactgtggtcaacaactggctgctcatc
gagggtcattccattggtattggtgactccattgctgatgccaagacgtaccttgacatc
cagaatacgatcaagaaagccaaacaggatgtgatagaagtcattgagaaagctcataac
aacgagctggagccgacccctggtaacacactgaggcagacctttgagaaccaggtgaat
cgcatccttaacgatgctcgagacaaaacgggatcctctgcccagaagtctttgtccgag
tacaacaacttcaagtccatggtggtggctggatctaagggctcaaagattaacatctca
caggttattgctgtggtggggcagcagaacgtggagggtaagagaatcccgtttggcttc
aaacatcgcacattgcctcacttcatcaaggatgactacggtcctgagagcagaggtttt
gtggagaactcctacctggccggcctgacaccaacagaattcttcttccacgccatggga
ggcagagagggtctgattgatacagctgtcaagacagctgagactggttacatccagcgt
cgtctgatcaagtctatggagtctgtgatggtgaagtatgatggcacagtgcggaactcc
atcaatcaggtggtgcagctgcgatacggtgaggacggcctggcaggagagaatgtagag
ttccaaaatctggcaacagtgaaaccctcgcacaaagccttcgaaaagaagttcaagttt
gattgcacaaatgagcgagcactgaggcgaacgctgcaagaagacgtggtgaaagacgtg
atgaccaatgctcatgtccagggcaccttggaaagggagtttgataagatgaaggaggac
agggagatcctgcgagcaattttccctactggtgacagtaaggtggtgctgccgtgcaac
ctggccagaatgatctggaacgctcagaagatcttccgaatcaaccctcgaactccgaca
gacctccatcctctcagagtggtcgagggtgttcacgacctgagtaagaagctggtgatt
gtgaatggcgacgaccctctgagtagacaggcccagcagaacgccaccttgctctttaac
atccacctgcgctccacactgtgctccaagcgcatgaccgaggagttccggctgtccacc
gaggctttcgattggctgctgggagagattgagaccaagttcaaccagtctattgctcac
cccggtgagatggtgggtgctctggctgctcagtctctgggagagccagccactcagatg
accctgaacactttccactacgccggcgtgtcggccaagaacgtaacactcggtgtgccc
cgtctgaaggagttgatcaacatttcgaagaggccaaagacgccttcactgactgttttc
cttctgggtcaggcggcacgtgacgcagagagggccaaagatatcctctgtcggctggag
cacacaacactgagaaaagtgacggccaacaccgccatctactacgatcccaacccacag
aacacggtggtggccgaggaccaggagtgggtgaacgtctactacgagatgcccgacttc
gatgtgacacgaatctcgccgtggctcctgcgcatcgagctcgaccggaagcacatgaca
gatcgcaaactgactatggagcagattgcagagaagatcaatgcaggttttggagaagac
ctcaactgcatcttcaacgacgacaacgctgagaagctggtgctgcgaatcagaatcatg
aacagtgatgaaaacaagttccaggaggacgaggaggtggtggacaagatggatgacgac
gtcttcctgaggtgcatcgagtccaacatgctgacagacatgactctgcagggcatcgag
cagatcagcaaggtgtacatgcacttgccccagactgacaacaagaagaagatcatcatc
acagaggacggtgagttcaaagccctgcaggagtggatccttgagacggacggagtgagt
ctcatgagagtgctcagcgagaaagacgtcgaccccgtcaggaccacctccaacgacatt
gtggagatattcacggtcttgggaattgaggctgtgcgaaaggctctggagagggagttg
taccacgtcatctccttcgacggttcctacgtcaactaccgccacttggctctgctctgt
gacaccatgacctgccgaggtcacctgatggccatcacccgtcacggcatcaaccgccaa
gacacgggaccgctcatgaagtgttccttcgaggagacggtggatgtgttgatggaggca
tcatcccatggagagtgcgatcccatgaagggtgtgtcagagaatatcatgcttggccag
ctagcaccagcggggacgggctgcttcgacctactgctggacgctgagaagtgcaaatac
ggcatggagattcccacaaacatacccggcatcagcgtggctggacccacgggaatgttc
ttcggcactgtgcccagtcccatgagcggcatgtcccctgctatgaccccatggaacacc
ggagctaccccagcctatggcgcttggtctcccagtgttggcagcggcatgacccctgga
ggagcagggttctcccccagtgcagcatcagacgcaagtggcttttctcctggttactcc
cctgcttggtctcccactcctggctctccaggatctccgggacctgccagcccatacatc
ccatctccaggtggagccatgtcaccaaactactcccccacttcccccgcctacgagcct
cgttccccaggtggctacaccccacagagcccgggctactcccctacctctccgtcctac
tcccccacctctccctcttactctcccaccagccccaactacagcccgacatctccttcc
tactcgcccacctcgcccagttactccccaacttctccttcctattcgcccacgtctcct
tcctactctccgacgtctccctcctactcccccacctctccctcctactctcccacctcc
ccctcctactctcccacttcgcccagctatagtccgacgtcgccgagctacagcccgacg
tcgcccagctattcacccacctcaccgtcttactctcccacctcgccttcttactccccc
acctctccatcctattcgcccacctccccttcgtactcccccacgtctccttcctactcg
ccgaccagcccgagctacagccccacatcaccaaactacacccccacctcacccagttac
tcccctacctccccatcttactccccgacatcgccatcttactccccgacttctcccaac
tacaccccgaccagccccaactactcacccacttctccctcgtactcacccacctctccg
tcatactcgccttccagtccacgctacaccccgcagtcgcccacttatacgcccagctca
ccatcatacagccccagctcgccctcttactcccccacctcacccaaatatactccgacc
tcgccttcatacagccccagctccccagagtacactcccacctcccccaaatattctccc
acgtcacccaagtactccccaacatcgccgaagtactctcccacttctcctacttactct
ccgacgactccaaaatacagccccacctctcccacctactcccccacctcccccacctat
acccccaccagccccaaatactctcctacatcccccacttactccccaacttcacccaaa
tactcacccacatctcccacgtactcgccgactagtcccaaaggctcgacatacagcccc
acctcccctggatacagccccacctcccccacctacagcccggccatcagccctgacgac
agcgacgaggagaacaactga
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integrated database retrieval system
