Maylandia zebra (zebra mbuna): 101464716
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Entry
101464716 CDS
T02814
Symbol
nwd1
Name
(RefSeq) LOW QUALITY PROTEIN: NACHT domain- and WD repeat-containing protein 1
KO
K24734
NACHT domain- and WD repeat-containing protein
Organism
mze
Maylandia zebra (zebra mbuna)
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
mze04990
]
101464716 (nwd1)
Domain-containing proteins not elsewhere classified [BR:
mze04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
101464716 (nwd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
EIF3I
WDR55
Beta-prop_EML_2
NBCH_WD40
WD40_MABP1-WDR62_1st
DUF4062
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_EML
AAA_16
NACHT
Beta-prop_WDR75_1st
Beta-prop_NWD2_C
NPHP3_N
Beta-prop_CAF1B_HIR1
Beta-prop_Nup120_160
Beta-prop_IFT122_1st
AAA_22
NPHP3
AAA_19
TniB
APAF1_C
Y_phosphatase
Motif
Other DBs
NCBI-GeneID:
101464716
NCBI-ProteinID:
XP_004557068
LinkDB
All DBs
Position
LG23:9728202..9744820
Genome browser
AA seq
1635 aa
AA seq
DB search
MMAQSPTEGRGGEIGPQDVLRGCTDGAQRTKSNMIRVFISSTFTDMSSERKALLEKAYPE
VRSFCCGLGLVFEVVDLRWGIRNVPSGDHEACEVFLEEIQRCEQMSAGPTFIALLGNRYG
HRALPRLIPEKLFDALLSKLSKNPEGIKTLNQWFKKDSNAVPPTYVLQPIIAHFPHYIDL
RPESGKQHDKDVLSWRLAETRLLRLLRSAATDAEDTGEITAEEKQRFYTSVTEREFERGL
WQNDYESSALLFVREIPRQKSREGPKRFAKFMDVTGDGLLDAEAQGLLAGLKTRLFVKSQ
KILNLHSVELSRGSINPKCKEHAQYLDSVCEQFVSQMKARIGAAMDSLGRRKMWGTTEEE
EKMDGLVVTEARRHIAISAELCRGFHGREGLLGKLCLAMWESSNVRHRPLVVHGGAGMGK
TAVLCKLAQEMRGVLEARAVVVIRLLAACHPQKPDIDHVLHSICTQVCLASGLAPPSPLT
VSTHLELLRFFWDVLEQVSQQGGALVIVLDSVEQLADQHHAHKLRWLPVDLPPNVHVVVS
METNSEAFANMRFKLESLGSFFEAERLSCEEGERIIESDLRASQRTLTCEQSSAVLQTVE
SSGCPLHLKLILSVAKRWTSFTPLTELRLGTSTQEMMSHLFLMLEEKHGKELVGGALGYI
TLAREGLLEAELRDVMSLDDDVISEVYRYSLPPIPSLIRLPPLLWARLRRDLEDHLEERW
TDGVATIAFNNKRLSEAVSAHYLRSERRGRSLRILAEYFLGRWSGKLRPASLPGLSLLLS
DRKVPPQPLWFAPGLANIRKLQELPYHLLHSGLWEELRQEVISCAEWLFIKSRLCGVSSV
IHDLDQCSKYMDCTETGLIRDALVLMKPSLCFLEGHMEVSLFYSELLARLSSLNSAFPTV
IGRLCSQCEEWLLKYPDPILIPRSSFLQQPGGALQHTLSVLRGGVVCMDISVVLRLLVAG
SDDGVVEVWSMLDKQLVHTLLGHTASILAVKVIGSPAHCLSLAADGSLRRWSLMNGQQLF
CIEEAVPIDSIPSSVHLHLSEQLLFVYTRTQVKVWQLDGAELHLNSSDDEVWLVLGVLGE
SVVYLSNSGRVRISHPVYGTQLTVKTPQENSVRHRTVVTTLMLPKREKVFVVYKGGFLHQ
ISRTGKQTVGEFPLLPSFFSVTEDEKTLLAASECTLSLFSILGDSLDRFLDLQHDDDILS
ACVSSDGRRLVSGAADQLVRVWSVTTGALLDSLCGADAPVTCVLLFNDFVVSASTATSSI
LLWNLKYDASTKPTIRIPADSAHIALTKDGNQVFYVHQQSHTEVMSWNSHTGSVCERLPV
SSEVSCLELAQNKRLLLCGLTSGTVLIYPLALPQETLCXPPPESLCRVLCLTAGTKEKHL
AVAYEDSVCLFEITSRDNFPTVEGPLKKFALPLLHAPLSAMALLPDRRLLYGTSCGEVTL
WDFGRGGDVSDLEPHRSGVTCVTVSNRGAHALVGSEDTVQRLWALNPLALDHTMEYKGFL
FEGVLSAAFSETDRFIFTGSQDRTIKVWDVASGNLLFVQYVYSPVVRMVTFRDGFVAITR
QGAIIRELFRCPDHIGPDYNPVRSFRAQYRVTSREKDREGPQTSVSNLQDFNPTQLNLNL
VGMFKAKPSSACVML
NT seq
4908 nt
NT seq
+upstream
nt +downstream
nt
atgatggcacagagtccgacagaaggaagaggaggagagatcggcccgcaagacgtgctg
agaggatgcacagacggcgctcagaggacgaagagcaacatgatccgagtgttcatcagc
tccacgttcacagatatgagcagcgagaggaaggctctgctggagaaagcttacccagaa
gtccggtccttctgctgcgggcttggcttggtgttcgaggttgtggatctacgctggggg
atccgaaacgtcccgtcaggagaccacgaggcctgtgaggtcttcctggaggagatccag
cgctgcgagcagatgtcagctggtccaacgttcattgctctgctggggaaccggtacggc
caccgagctcttcctcgcctcattccagagaaactctttgacgctcttctgtccaaactc
tccaaaaacccagaaggcattaagacacttaaccagtggtttaaaaaagacagcaatgct
gtcccacccacctatgtccttcagccaatcatagctcacttccctcattacattgacctt
cggcctgagagcgggaagcagcacgacaaagatgtcctgtcatggcgcctagcagagact
cggctactgcgactacttcgatctgcagccactgacgccgaggacaccggcgagatcaca
gctgaggagaaacaacggttctacacatcagtcacagagcgggagtttgagcgtggtttg
tggcagaatgactatgaatcatctgctctgctcttcgttcgtgagattccccgtcagaag
tccagggaggggcccaaacgttttgccaagttcatggatgtgaccggcgacggcctgctg
gatgccgaagctcagggactcctcgccgggctgaagacacggctcttcgtcaagtcacag
aagatcctcaacctgcactctgtggagctgagcagaggaagcataaatccgaagtgcaag
gagcatgctcagtacctggacagcgtctgcgagcagtttgtctcacagatgaaggctcgg
attggcgcagcgatggattcactgggccggaggaagatgtggggaaccaccgaggaagag
gagaagatggacgggttggtggtcacggaggcaaggcgccacattgccatcagtgctgag
ctttgcagaggtttccatggcagggaggggctgctggggaagctgtgccttgccatgtgg
gagtccagcaatgtccgccacaggccgctggtggttcatggtggcgccgggatggggaag
acggcggtgctgtgcaaactggcccaggagatgcgtggtgtactggaggccagggcagtg
gtggtgatcaggctgctcgcagcttgccaccctcaaaaacctgacattgaccacgttctc
cacagcatctgcacacaggtgtgcttggcttctggtctggctccgccctcaccgctgacg
gtctccactcacttggagctgctgcgattcttctgggatgttcttgagcaggtttcccag
cagggcggtgctctggtcatcgtcctggactctgtggagcagcttgcagaccaacatcac
gctcacaagctccgctggttgcctgttgacctcccgcccaacgtccatgtggttgtctcc
atggaaaccaacagcgaggcatttgctaacatgcggtttaagttggagtctctgggaagc
ttctttgaggcagagcgtttgtcttgcgaggaaggtgaacgcatcatagagtcagacctg
cgagcgtctcagcggacgctgacgtgcgagcagagtagcgctgtgctgcaaactgttgag
tcatctggctgcccactccacctcaaactcatcctgtctgtcgccaaacgctggacgtcc
ttcacgccactgacagagctgcgtctgggtaccagcactcaggaaatgatgtcacacctc
ttccttatgctggaggaaaaacacgggaaggagctggtgggcggggctttggggtacatc
actctagcaagggagggtctgctggaggctgagttgcgtgatgtcatgtccctggatgat
gatgtcatcagtgaggtgtaccggtactcccttcctccgattccctcactgatccggctg
ccgcccctcctgtgggcgcggctaaggcgggaccttgaggaccacctggaggagcgctgg
actgatggagtcgccaccatcgccttcaacaacaagcgtctgtccgaggcggtctcagca
cattatctgaggtcagagcggcgggggcgaagtttgaggatcctggcagagtacttcctg
ggtcggtggtcagggaaactgaggccagcgtctctgccgggtctctcactgctgctgtct
gacagaaaggtcccaccccagccgctgtggtttgctccaggattggctaacatcaggaag
ctgcaggagctgccctaccacctgctgcacagtggtctgtgggaggagcttcgacaggaa
gttattagctgtgctgagtggctgttcattaagagccggctgtgtggtgtctcatctgtg
atccatgacctggaccagtgctccaagtacatggactgcacagagactggactgatacga
gatgctctggtcctgatgaaacccagcttatgcttcctggagggacacatggaagtgtct
ttgttttactccgagctgttggcccgactgtcctcgctcaactccgccttccccactgtg
attgggcggctgtgtagccagtgcgaggagtggttactgaagtatccggatccgattctc
atcccaaggagcagcttcctgcagcagccagggggggcgctgcagcacacgctaagtgtg
ctgcggggaggtgttgtctgcatggacatcagcgtggtgttgaggctcctagttgcgggg
tcagatgacggcgtggtggaggtttggagcatgcttgacaagcagcttgtccacaccttg
ctgggacacacagcttcaatcttggctgtgaaggtgatcggcagccccgcccactgcctc
tcattggctgctgacggttcactgaggaggtggagcctgatgaatggccagcagctcttc
tgcatcgaggaggcagtgcctatagactccatcccttcatcggtgcacctccacctatct
gagcagctgctcttcgtttacaccaggacacaggtgaaggtgtggcagctggatggggcg
gagcttcacctgaacagcagcgacgatgaggtctggttggttctcggggttcttggagaa
tcggtggtctatctgtccaactccggtcgggtcaggatctcgcacccagtttacgggact
cagttaacggtgaaaactccgcaggaaaactcagtgaggcaccggactgtcgtaaccacg
ctgatgctccccaaacgtgagaaagtgtttgttgtgtataaaggaggattcctccaccag
atttccaggacaggcaaacagactgttggcgagtttcctctgcttccttccttcttctca
gtcactgaagatgaaaaaaccctgttagcagccagcgagtgcactctgagcctcttcagc
atcctcggcgactctctggaccgattccttgacctccagcacgacgatgacattttatcc
gcctgtgtctcctcagacggcaggcggctcgtgtctggagctgcagaccaacttgtacga
gtgtggtcggtgaccacgggggcgctgttggactctctgtgtggggcggacgcccctgtc
acctgtgtgcttctctttaatgactttgtggtttcggcctcgacggccacctcttccatc
ctgctgtggaacctgaagtacgacgccagcaccaaacctaccatccgcattcctgcagac
tccgcccacattgccctcaccaaagacggcaatcaggttttctatgtccaccagcagagc
cataccgaggtcatgagctggaacagccacacaggttctgtgtgcgagcgtttgcccgtc
tcctccgaggtgtcctgtctggagttggctcagaacaaacgtctcctcctctgcggcctg
acgagtggcaccgtcctcatctacccattagccctgcctcaggagacgctttgcnatccc
cccccggagagcctctgcagggtcctctgcctcaccgccggcaccaaggagaagcacctg
gcggtggcctacgaggactcggtgtgcctgttcgagatcacttccagggacaactttccc
acggtggaggggcctctgaagaagtttgcactgccccttctccacgccccgctgtccgcc
atggccctgcttcccgaccgcaggctgctgtacggcacgagctgtggggaggtgacgctg
tgggactttggcaggggtggcgacgtctccgacttggagcctcaccgcagcggagtgacc
tgtgtgacggtcagtaaccggggggctcatgctctggtgggctccgaggacactgtgcag
aggctgtgggccctgaacccgctggccctggaccacaccatggagtacaagggctttctc
tttgagggcgtcctctctgctgcgttctctgaaaccgaccgcttcatcttcaccgggtct
caggaccgaaccatcaaagtctgggacgttgcatcaggaaacctgctcttcgttcagtac
gtctactcccccgttgtccgaatggtgaccttcagggacggctttgtggccataacccgg
cagggcgccatcatcagagagctgtttcggtgtccagaccacatcgggcccgactacaac
cctgtgaggagtttcagggcccagtaccgggtcacctctagggagaaggaccgggaagga
ccgcagacctccgtatccaacctgcaggactttaaccccacccagttaaacctgaacctc
gtgggcatgttcaaagccaaaccctcctctgcatgtgtcatgctgtag
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integrated database retrieval system
