Maylandia zebra (zebra mbuna): 101464805
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Entry
101464805 CDS
T02814
Symbol
uimc1
Name
(RefSeq) BRCA1-A complex subunit RAP80 isoform X1
KO
K20775
BRCA1-A complex subunit RAP80
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
101464805 (uimc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mze03400
]
101464805 (uimc1)
DNA repair and recombination proteins [BR:
mze03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
101464805 (uimc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAP80_UIM
zf-WRNIP1_ubi
CpG_bind_C
Motif
Other DBs
NCBI-GeneID:
101464805
NCBI-ProteinID:
XP_004556907
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Position
LG10:complement(30311384..30327422)
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AA seq
958 aa
AA seq
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MALRKQKLIDVASENQKEEDSQEDEAADEQDELSASLLATSMAREKRQRESKSKPKEMSE
EEMMDLALRLSEQEASATALRRQQEEEEAMMRAIKESMVGQTQACRTPKSPSQPADVSLR
LCSRRKLAYSNGKTTLAIDRGASEDGCLQAGSGDGDNGNLKRKRKAGSPLPEMPDLSQTQ
VYSQASPCSSESLPALPDSPQSSDSTQIQDSQLHQSPVFPLTGCRAEVRIGRLSQDLLDT
CRSSGFVLCSQNGSNATQKSRRPESPTFPKSDVASCPKSPALSGTDPDNSDEIEPSPECA
KSPVFGRNAQHERSPSARRPRDAMRSQDGENSGFTFSSQDSLTPSVKPTSPVFPRSPGIP
PSERLAFPESPNRGQAEPSHAHSESPVFGLQQQRCESPPANRKDGQSRLDGLKASESDEL
SGRAKAPNPAESQLTSDMTLVWSDGDEDVTPTGSPSPVFPEETSVHQAESPAASLNHVAA
ASGATGSNCSLRPQSSSNRQTSPETSSKSGTEEPRPDRSRTLSSVGSGESADSTTVHYYW
GVPFCPRGLDPDTYTQVIVAQMEVYEKTLKRAQRRLLRKAEWGEAVLPQTEESPSHELPA
GSPQRHAARRRGLRLRSKTQDEAADTPTTEEKEEEEEQTKTENKEEDGKKDGDEEPMDAE
DCEVCPETQLSGDSSQDVTLVCDAEDQPAAKTPEIQMILHADPPSRSEPQVEEVEADAPT
GEQMEADVPVRSSEGGAGQPASREEVQEDGGDPDVEEIKDQAPEPAVVPRSPETAVDCPL
CQASFPASRIEMHAAYCDGEVAVVEERRPKVDYIQVSRKTQRKRTHRANAEDTNEGADVG
RNQEKCYICQRAVPLKDYSRHTELCIQRHGSKTAARGNLLLALDQTESRDSDAGPSGSKV
LPGDVIDLRDDDDDEEEVSAFRVSNSPIRSFTPISEAADCLIDFKKQQRAKKPYQRRR
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgaggaagcaaaagctcatcgacgtggcctctgagaaccagaaggaggaggac
tcgcaggaggacgaagctgcagacgagcaggacgagctctcggcgtcgctgctcgccacg
tcaatggcgagggagaaacggcagagggagagcaaatccaaacctaaagagatgtccgag
gaggagatgatggacttggctctgcgcctgagcgaacaggaagcgagcgccacggcactc
agacggcagcaagaggaggaggaggccatgatgagggccatcaaggagagcatggtcggc
cagacgcaggcatgccggacccccaagagtccatctcagcccgccgacgtttccctcagg
ctctgctcccgccgcaaactagcgtactcgaacgggaagacaacgctcgccatcgatcga
ggagcctcagaggacggctgccttcaagcaggatctggagacggtgacaacgggaattta
aagaggaagaggaaagcggggagtcctctgccggagatgccagacttgtcgcagactcag
gtctactctcaggcgtctccctgcagctccgagtctctgccggctctccccgactcgccg
cagagctccgactccacgcagatccaggactcacagctgcatcagtctcccgtctttcca
ctgacgggctgccgggcggaggtccgcattggccggctgagccaggacctgctggacacc
tgcaggagctccgggttcgtgctgtgctctcagaatggttcgaacgccacccaaaagtcc
cgtcgtcccgagagcccgacgttccctaaaagtgacgtcgcctcatgtcccaaaagcccc
gccctgtctggcacagatcccgacaacagcgacgagattgagccgagccccgagtgcgct
aaaagccccgtgtttggcaggaacgctcagcacgagaggtcgccgagcgcccgcagaccc
cgagacgccatgcgcagccaagacggtgaaaactcaggattcacgttttcttctcaggac
agtttaaccccctccgtgaaacccacgtcccccgtgttcccacgaagccccggcattcct
ccatcagaacggttagcattcccagaaagtcccaatagaggacaggccgagccgagccac
gcccactccgagagccccgttttcggactgcagcagcagaggtgcgagagtcctccagcc
aacaggaaggacggtcagagtcgattggacgggctgaaagcgtccgagtcagacgagctg
agcgggcgggccaaagccccgaacccggccgagagtcagctgaccagcgatatgacgcta
gtctggtctgacggggacgaggacgtcacgccgaccggctctcccagccccgtcttccca
gaggagacgtcagttcatcaggcggagagcccggcggcctccctgaaccacgtggctgct
gcttcaggggcgactggatcaaactgcagcctgcgtcctcagagcagctccaacagacaa
acttcgcctgaaacttcttccaagtccggcacagaggagccgcggcctgatcgcagcagg
acgctctcctctgtcggctctggagagtccgccgactccaccacggttcactactactgg
ggcgttcccttctgcccgcgaggcctcgacccagacacgtacacgcaggtgatcgtggct
cagatggaggtttacgagaagactctgaaacgggctcagcggcgtctgctgaggaaggcg
gagtggggcgaggccgtcctgccgcaaacggaggaatcgccgtcgcacgagttgcccgct
ggatcgcctcagcgtcacgccgctcgcagacgaggtctcaggctgaggagcaaaactcag
gatgaagctgctgatactccgacaacggaggagaaggaggaggaagaggagcaaacgaag
acggaaaacaaagaggaggacgggaagaaggatggagacgaagaaccgatggacgctgag
gactgtgaggtttgtccagagacgcagctgagcggcgacagcagtcaggacgtgacgctg
gtgtgtgacgcagaagatcagcctgcagctaaaactccggagattcagatgatccttcac
gctgatcctccctccaggagcgagccacaggtggaggaggtggaggccgacgctccaaca
ggtgaacagatggaggcggacgtccccgtcaggagcagcgagggcggcgccggtcagcct
gcgagcagggaggaggtgcaggaggacggaggggatccagatgtggaggagataaaggac
caagcgccggagccggccgtcgtcccccgcagccccgagaccgccgtcgactgcccgctc
tgccaagcgtccttccccgcgagcaggatcgagatgcacgccgcgtactgcgacggcgag
gtagcagtcgtggaggagaggaggcccaaggtcgactacatacaagtgtcacggaagact
cagaggaagagaacacacagagcgaacgccgaagacacaaatgagggcgctgacgttggc
aggaaccaggagaagtgctacatctgtcagagagccgtgcctctgaaggactacagccga
cacaccgagctctgcatccagcgccacggatccaagactgcagctaggggaaatctgctg
ctggctctggatcagacggagagcagagactcggatgctggcccgtctggatccaaagtc
ctgcccggtgatgtcatcgatctgcgggatgatgatgatgacgaggaggaagtgtcagca
ttcagggtcagtaactctcccatcaggtccttcacacccatctcagaagccgccgactgc
cttatcgacttcaagaaacagcagcgagccaagaagccgtaccaaagacgccgatga
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