Maylandia zebra (zebra mbuna): 101465429
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Entry
101465429 CDS
T02814
Symbol
trim54
Name
(RefSeq) tripartite motif-containing protein 54
KO
K10653
tripartite motif-containing protein 54
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
101465429 (trim54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mze04121
]
101465429 (trim54)
Ubiquitin system [BR:
mze04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
101465429 (trim54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
zf-B_box
RING_XB3-XBAT31
zf-C3HC4
zf-C3HC4_4
zf-RING_5
zf-C3HC4_3
zf-RING_6
zf-RING_2
Sina_RING
Prok-RING_4
CYP38_PsbQ-like
APP_E2
DUF1664
DUF1804
Zn_ribbon_FGT1_2
Aldedh
Motif
Other DBs
NCBI-GeneID:
101465429
NCBI-ProteinID:
XP_004568448
UniProt:
A0A3P9BE56
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All DBs
Position
LG15:19257608..19275175
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AA seq
363 aa
AA seq
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MSFALSFKHPTAGSSGPGAGSGATMENLEKQLICPVCLEMFSKPVVILPCQHNLCRKCAN
DIFQSANPLWHSRGSSSATASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYRQQ
ESSRLVSMKPEQQQLMCEEHEDEKINIYCLSCQTPTCSMCKVFGQHRDCDVAPLGTVYMR
QKTELSDGIAILVASNDNVQAVISQMEAICHTIEENGQRQREHLSGHFERLVAILEERKQ
ELVGLITKEQDEKLKHVQSLIRQHSDHLEVGVTLVESGIQSMEEPHMPLFIQSAEAILEK
MAAMARASKLELPELGYESMSHFIIDIDDLADTLRNISFCCGVAADEEDFEEVEEDLDFG
SRF
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgagctttgctctcagctttaagcacccgacagcaggcagctctgggcccggtgctgga
agcggagcaaccatggagaatctggaaaagcagctgatctgccccgtctgcctggagatg
ttctccaaacctgtggtcatcctgccctgtcagcacaacctctgccgcaagtgtgccaat
gacatcttccagtcagctaatcctctgtggcattcccgcggttcctccagtgcgacggcc
agtggcggtcgctttcgctgtccatcgtgccgccatgaggtggtgctggaccgccatgga
gtctatggcctccagaggaacctgctggtggagaacattatcgacatctatagacagcag
gagtcctccagacttgttagcatgaagccagagcagcagcagctcatgtgtgaagaacat
gaagacgagaagatcaacatctactgtttgtcctgccagacgccgacctgctccatgtgc
aaagtgttcggacagcacagagactgtgatgtggctccgctcggcaccgtctacatgaga
cagaagacggagctgagtgacggcattgcgatcttggtggccagtaatgacaacgtccag
gcagtcatctctcagatggaagcaatctgccacaccatagaggaaaacggccagcggcag
agagaacacctgagcggccactttgaacgtttggtggccatcttggaggagcggaagcag
gagctggtgggtctcatcaccaaagaacaggatgaaaagctcaaacatgttcagtcgctc
atccgtcagcacagcgatcacctggaggtcggcgtcacgctggtggagtcgggcatacag
tccatggaggagccacacatgcctctgtttatacagagcgctgaagccatactggaaaaa
atggcggcgatggcgagagcctcgaagttggagcttccagagctcggttatgagagcatg
agccatttcatcatcgatatcgatgacctcgccgacacactgagaaacatcagcttctgc
tgcggtgtggcggctgatgaagaagattttgaagaagttgaggaagatttggactttggc
tccagattttaa
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integrated database retrieval system
