KEGG   Maylandia zebra (zebra mbuna): 101465452
Entry
101465452         CDS       T02814                                 
Name
(RefSeq) WD40 repeat-containing protein SMU1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
mze  Maylandia zebra (zebra mbuna)
Brite
KEGG Orthology (KO) [BR:mze00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mze03041]
    101465452
Spliceosome [BR:mze03041]
 Complex B
  Other components
   Complex B specific factors
    101465452
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 WD40_WDHD1_1st Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_EML_2 WDR55 WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_EML EIF3I ANAPC4_WD40 Beta-prop_CAF1B_HIR1 WDR90_beta-prop_4th Beta-prop_WDR90_POC16_2nd WD40_Gbeta Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st NBCH_WD40 LisH_TPL Beta-prop_ACSF4 Beta-prop_TEP1_C Beta-prop_Nup120_160 Beta-prop_RIG_2nd Beta-prop_HPS5 Beta-prop_VPS8 Beta-prop_IFT122_1st Beta-prop_IFT140_1st Beta-prop_Vps41 Beta-prop_WDR41 Beta-prop_Aladin Beta-prop_NUP159_NUP214 Beta-prop_NWD2_C Ge1_WD40 Beta-prop_DCAF4 Beta-prop_SCAP Beta-prop_WDR35_TULP_N Beta-prop_SPT8 Beta-prop_WDR19_1st Beta-prop_WDR75_2nd WD40_RFWD3 Beta-prop_IP5PC_F Beta-prop_EIPR1 VPS8_N Beta-prop_RSE1_1st Beta-prop_WDR11_2nd TFIIIC_delta DUF7165 Beta-prop_CGLA Beta-prop_WDR11_1st
Other DBs
NCBI-GeneID: 101465452
NCBI-ProteinID: XP_004549564
LinkDB
Position
LG6:17791445..17801855
AA seq 510 aa
MAVEMEPADVIRLIMQYLKENNLYRTLTTLQEETTVSLNTVESIESFIADINKGHWDSVL
LAIESLKLPDNILIDLYEQVVMELIEMREVGAARSLLRQTDPMIMLKQTQPERYSHLENL
LTCSYFDPREAYPKGSSKEKRRRAIAEALVREVSVVPPSRLIGLLEQVGSMKLQQYTDHL
SPDMTIDTSACKEKYVEKETFPNQLYRHIKFGRRSHVECARFSPDGKYLITGSVDGFIEV
WNFNSGKISKDLKYQAQDSFMMMDDAVLCMCFSQDTDLLATGAQNGKIKVWKIQSGLCMR
RFEHAHNKGVACLGFSKDGNQILSASFDHTIRVHELKSGKTLKELNGHSSFVNDVFFTQD
GFHIISASSDGTVKIWNTKSCECIHTFKCLSRTLDVPVNNVIPLPQNPEHFVVCNHSNAV
VVMSMRGQTVKTFSSDRKRADFVCCTLSPRGEWIYCVGEDLVLYCFSYTTGRLEKTLTVH
EKDVIGITHHPHENLIATYSEDGLLRLWKP
NT seq 1533 nt   +upstreamnt  +downstreamnt
atggctgtggagatggagcccgcggatgtgatccgtctgataatgcagtacctcaaagag
aacaacctctaccggacactgaccacattacaggaggaaaccaccgtctccctcaacaca
gtggaaagcatcgaaagctttattgcagatataaacaagggtcactgggactctgtcctg
ctggctattgaatctctcaagttgcctgacaacatacttattgacctttatgagcaggtt
gttatggagctcattgaaatgagggaggtgggcgcagctcgctcgctcctcaggcaaacc
gacccgatgatcatgctgaagcagacccagccagaaaggtacagccacctggagaacctg
ctaacctgttcctactttgaccctcgtgaggcgtacccaaaaggaagcagcaaggagaag
cggcgcagagccatagctgaggctctggtgagggaggtcagtgtggtgcccccctcccgc
ctcataggactcctggaacaagttggttctatgaaactacagcagtatacagatcacctc
tcccctgatatgaccattgatacatctgcctgcaaagaaaaatatgtggagaaagagacc
tttccaaaccagctgtaccgccacatcaagtttgggcggcggtcacacgtggaatgtgcc
cgtttctcacccgatggaaagtatttaattacggggtcagtagatggctttattgaggtc
tggaacttcaacagtggaaaaattagcaaggatttaaaatatcaggcccaagacagcttc
atgatgatggatgatgctgtgctgtgcatgtgcttcagtcaggatacagatctactggct
actggagcgcagaatggcaaaataaaggtgtggaagatccagagcggcttgtgtatgcgt
aggtttgagcatgctcacaacaaaggtgtggcctgtctgggcttttccaaagacggcaac
cagatcctcagtgcctccttcgaccacaccatcagagtccatgagctgaagtcaggcaag
acgctaaaggagttaaatggccattcatcatttgtaaacgatgtgttcttcactcaagat
ggatttcacatcatcagcgcctcatcagatggcactgtgaagatttggaacacaaaatcc
tgtgagtgcatccacacttttaaatgtctgtcgaggacactggatgtccccgtcaacaac
gtgatccctctcccccagaatccagagcactttgtggtttgtaaccactccaacgctgtg
gtcgtcatgagcatgcgtggccagactgtgaagaccttcagttcagacagaaaaagagca
gactttgtgtgttgcaccctgtcaccccgcggggagtggatttactgtgtgggggaggac
ttagtgctctactgcttcagctatacaacaggaaggctggagaaaacgctgactgttcac
gagaaagacgtaattggcatcactcaccacccacatgagaatctgattgccacgtacagt
gaagacggtctgctgaggctatggaagccttaa

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