Maylandia zebra (zebra mbuna): 101465720
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Entry
101465720 CDS
T02814
Symbol
ssrp1
Name
(RefSeq) FACT complex subunit SSRP1 isoform X2
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
mze
Maylandia zebra (zebra mbuna)
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mze03000
]
101465720 (ssrp1)
03036 Chromosome and associated proteins [BR:
mze03036
]
101465720 (ssrp1)
Transcription factors [BR:
mze03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
101465720 (ssrp1)
Chromosome and associated proteins [BR:
mze03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
101465720 (ssrp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
POB3_N
HMG_box
HMG_WDHD1
HMG_box_2
SSRP1_C
FERM_C1_MyoVII
Motif
Other DBs
NCBI-GeneID:
101465720
NCBI-ProteinID:
XP_004545546
UniProt:
A0A3P9B2C0
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Position
LG2:25905014..25920802
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AA seq
704 aa
AA seq
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MGDTLEFNEIYQEVKGSWNDGRLRFSKQNVVYKSSKTGKVDSIPASELNLAQWRRVCLGH
GIKLGTSTGHVYKYDGFRDTDFEKISEFFKANYKVELTEKDMCVKGWNWGTAKFSGPLLS
FEVNDNTAFEIPLSNVSQCATGKNEVTLEFHQNDDTEVSLMEVRFYVPPSQSDERQDPVE
AFAQNVLSKADVIQATGDAVCIFKELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV
LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKEEDISLTLNMSEEDVERRFE
GKLSKFMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGF
IYVHKPPVHLRFEEISCVNFARGTTTTRSFDFEIETKQGNQYTFSSIEREEYGKLFDFVN
AKKLNIKNRGFKEGMKGKIDEYSDSDDDQHDAYLERMKAEGKIREEGNDSDESDGESDES
FNPGEEDEEIAEEYDSNASASESSEGGEESEDESAKKKKAKKAKVVKEKKERKPRKEKKQ
KDAGGPKRPMSAYMLWLNSSRERIKSDNPGISITEISKKAGEMWRQLSKDEKQEWEAKAG
EAKKQYDKAKKEYKESGGATSSPRKESKKSGGKKDDKKRKSAGADKDKERGGNDSFKSRE
FIETSEESSSDSDHKSKSKRKKESDDEEEEEAVSTPASSEEESD
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgggagacacactggagttcaacgagatctaccaggaggttaaaggctcctggaatgac
ggacggctgcgtttcagcaagcagaatgtggtttataagagcagcaagacggggaaggtg
gatagcatccctgccagcgagctcaatttggcccagtggaggcgggtgtgcttaggccat
ggcatcaaacttggcaccagcacgggacacgtctacaaatatgatggcttcagggacacg
gactttgagaagatttcagagtttttcaaggccaactacaaggtggagctgacagagaag
gacatgtgtgtgaagggctggaactggggaacggccaagttttcagggccactgttatcc
ttcgaagtcaatgacaacacagcgtttgagatcccactgtccaacgtttcccagtgtgcc
acagggaagaacgaagtcactctggagtttcaccagaatgacgacacagaagtctccctt
atggaggtccgattctacgtcccacccagtcagtctgatgaacggcaagaccccgtggag
gcatttgcccagaatgtgttatctaaggctgatgtgatccaagctacaggagacgctgtg
tgtatcttcaaagagctgcagtgtcttacacccagaggaagatatgacatccgtatctac
ccgacatttcttcacctgcacggtaaaacgttcgactacaagattccctacaccaccgtc
ctccgtcttttcctgctgccacacaaggatcagaggcagatgttctttgtgatcagtctg
gatcctcctatcaagcaggggcagacacgttatcactttctcattctgctcttctccaag
gaagaagatattagcctaaccctcaacatgagcgaagaagatgtggagcgtcgttttgag
ggtaaactcagtaagttcatgtcaggatctctttatgagatggtgagcagggtgatgaag
gccttggtcaaccgtaaaatcacagtacctggaaacttccaaggacactcaggagcccag
tgcatcacctgctcctacaaggcatcctcaggcctcctctatcctttggaaaggggtttc
atctacgtccacaagccccctgttcacttgcgctttgaagagatctcttgtgtcaacttt
gccagaggcaccaccacaacacgttcttttgactttgagattgagaccaagcaagggaac
cagtacacttttagcagcattgagagagaggagtacggcaaactttttgactttgttaat
gctaagaagctcaacatcaagaacagaggtttcaaagagggcatgaagggcaagattgat
gaatacagcgactcagatgatgaccaacacgatgcttacttggaaaggatgaaggctgag
ggcaagatcagggaggagggcaacgacagcgacgaatcagacggtgaaagtgatgagtct
ttcaaccctggagaggaagatgaagagattgcagaagagtatgacagcaatgcctcagca
agcgagagcagtgaaggaggagaggagagcgaagatgagagtgcaaagaagaaaaaggcc
aaaaaagccaaagtggtgaaggagaaaaaagagagaaagccacgaaaagagaagaagcag
aaggatgctggcggacccaagagaccaatgagtgcgtatatgctttggctcaactccagc
cgtgagcgaatcaagtcggacaaccccggcatctccatcacagagatctctaagaaagcg
ggagagatgtggagacagctgagcaaagatgagaagcaggagtgggaagcaaaggcaggc
gaggcgaaaaaacagtacgataaagcaaagaaagaatacaaagagagcggaggagcaact
tccagccccaggaaggagagtaaaaagtctggaggcaaaaaggacgataagaaaaggaag
tctgccggagcagacaaggacaaggagcggggaggaaacgacagctttaagagccgagag
ttcatcgagaccagcgaggagagttcatcagactctgaccacaagagcaagtccaagagg
aagaaggaatcagacgatgaggaagaagaagaggcggtgtcaacacctgcaagctccgag
gaagagtctgattga
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