Maylandia zebra (zebra mbuna): 101465842
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Entry
101465842 CDS
T02814
Symbol
nup54
Name
(RefSeq) nucleoporin p54 isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101465842 (nup54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mze03019
]
101465842 (nup54)
Messenger RNA biogenesis [BR:
mze03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
101465842 (nup54)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
Motif
Other DBs
NCBI-GeneID:
101465842
NCBI-ProteinID:
XP_004549758
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Position
LG7:complement(47510276..47520567)
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AA seq
578 aa
AA seq
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MAFNFGGATSNPAASTSGFSFGSFGAKTTPSTTFGFGTPATTTTASSGFGTLTAPGFGAA
TTTTAAPATGFSFGSTNTGFGGLGAGNTTAGAFGGFGTTTTTVAAPGATFSFAPPATGSL
FGNMQNKGFGFPTGLSTGTAAGTSGFGTGTGLGATSLGGFGGFNIQQTQQQQGGLFGQQA
GQNQSTQLYQQVTALSAPTLLGDERDSILAKWNQLQAYWGTGKGYYSNNNPPVEFNQENP
FCRFKAVGYSCIPMSKDEDGLVVLILNKKEADVRAQQQQLVESLHKILGSNQTLTVNVEG
VKALSNDQTEVIIYLVERSPNGTSKRIPASTLFNYLEQANIKVQLTQIGVVMSVTRTELS
PAQLKQLLQNAPAGVDPIIWEQAKVDNPDPEKLIPVPMVGFKELLRRLQIQEQMTKQHQT
RVDIISNDISELQKNQATTVAKIAQYKRKLMDLSHRVLQVLIKQEIQRKSGYAIQVDEEH
LRVQLDTIQSELNAPTQFKGRLNELMSQIRMQNHFGAVRSEERYSVDADLLREIRQHLKQ
QQEGLSHLISVIKDDLEDIKLIEHGLSDSGHMRGGILS
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcaattttggcggtgccacgagcaacccagcagcaagcacgtccgggttttca
ttcggttcatttggagccaaaactacgccatcgacaacatttggcttcggcaccccagcc
accacaaccacagcctcatccggattcggtactctaacagcccctggttttggggcagcc
accaccaccactgctgccccagccacaggctttagctttggctccaccaacactggattt
ggggggctgggagctggaaacaccacggctggcgcattcggtggcttcggaacaacgacg
acaactgttgctgcaccaggggcaacatttagctttgctccccccgcaacaggaagcctg
tttggtaacatgcagaacaaagggtttggattcccgactgggcttagcacagggactgct
gcaggaacatcgggatttggaactggaactggactaggagcaactagcctgggtggcttt
ggaggctttaatatccagcagactcagcagcagcaaggaggcttgttcggtcagcaggcg
ggtcagaatcagtccacccagctttaccagcaggtcaccgctctgtcagctcccaccttg
ttaggagatgagcgtgactccatacttgccaaatggaaccagctgcaggcatactggggc
acagggaagggctactacagcaacaacaacccacctgtggagttcaatcaggagaaccca
ttctgcaggttcaaggcggtggggtacagctgcatcccgatgagtaaggatgaagatggt
ttagtagtcttgattcttaataaaaaagaagctgatgtgagagctcagcagcagcaactg
gtcgagtccctccacaagatcctaggaagcaaccagaccctcactgtcaatgtagagggt
gtcaaagccctgtcgaatgaccaaacagaggtgatcatttatttggttgagcgctctccc
aacggcacctccaagcgaatcccagcgagtaccctcttcaactacctggagcaggctaac
ataaaggtccagctcactcagattggagtggtcatgtcagtgacgcgcacagagctgtcc
ccagcacagctcaaacagctgctgcaaaatgctcctgcaggagtggatcctattatctgg
gaacaggccaaggtggacaaccccgatccagagaagttgatcccagtgcccatggtagga
tttaaggagctgctccgcaggctgcagatccaggagcagatgactaaacagcaccagacc
agagtggatattatctccaatgacatcagtgaactgcaaaagaaccaagcaaccacagtg
gcaaagatcgcccagtacaagaggaagttgatggatctatctcaccgagtgctgcaggtg
ttgatcaaacaggagatccagcgaaaaagtggctacgctatccaagtggacgaggagcac
ctcagagtgcagctggataccattcagtctgaactcaatgcccccacacagttcaagggt
cggttaaatgaattaatgtcccaaatccggatgcagaaccactttggagctgtgagatca
gaagagcgctacagtgtggacgcagacctcctcagagaaatcagacagcacttaaaacaa
cagcaggaaggtttaagtcatttgatcagtgtcatcaaagatgacttggaagacatcaaa
cttatagagcacgggctgagcgacagcggacacatgagaggaggcatcctcagctga
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