Maylandia zebra (zebra mbuna): 101465895
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Entry
101465895 CDS
T02814
Name
(RefSeq) collagen alpha-1(XIV) chain
KO
K08133
collagen type XIV alpha
Organism
mze
Maylandia zebra (zebra mbuna)
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
mze00535
]
101465895
Proteoglycans [BR:
mze00535
]
Extracellular matrix (ECM) proteoglycans
Others
101465895
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
VWA_3
DUF4959
Mid1
Motif
Other DBs
NCBI-GeneID:
101465895
NCBI-ProteinID:
XP_024660039
LinkDB
All DBs
Position
LG11:6131144..6285753
Genome browser
AA seq
1780 aa
AA seq
DB search
MLSMGQISWCLWAPLVLLALVSYYPSKAQGQVPAPRKLRFKVLSSSKLLVSWKEPKGDFD
SYLFFYKSTPGGQQREIIVSKSDTSVLITDYSPSKVYTFSVIAVSGNKQSRPLQGRFKGE
RNESDKTESQRFTDSAAPPRNANEISGVDQFVCHTEAIADIVILVDGSWSIGRLNFRLVR
MFLENLVNAFDVGIDKTRIGLAQYSGDPRIEWHLNAFSTKDAVVDAVRNLPYKGGNTLTG
LALTFIFENCFKPESGARPGIPKIGILITDGKSQDDVIPPAEELRNAGVELFAIGVKNAD
ENELRSIASQPESNHVYNVADFNIMSSIVGGLTKTVCKQVEQQDKDIKQKHIPETTGMPL
NLVTSDITAQSFRVSWSHAPGNVEKYRVVYYPTQGRDPGDPQEAVVVGSESSVVLQHLSS
LTEYQLAVFAVYANKASAALRGSETTLALPTVTGLQLFDVSHNTMKIKWNSADGVSGYML
LYAPLTDDLDEKEIRVSDAVTELELDGLIPHTEYTVTVYAMFGEETSEPVTNQETTLPLS
PPSNLQFSDITHNSAHISWDPAPGGVNGYRIMWDKTDGLVTDEVEVGSVSSYDLGELTSL
TEYSVAIFALYNEGESEPLTDAFTTTPVPGPLNLHSSEVRTDSFKVSWDHSASDIILYRL
SWTPFDGGNTKEVVLSGSDNRYTLTGLSPSTEYEVMLTAIFKDKSESDTVFVTQTTLPTQ
TTTTSTKTTAARQAVRNLQLSDETTQSLEASWELEDPNVESYRVAYTSLSGDHKDSMSVS
GGERRAVLEPLQSDTSYKVTVTPVYSDGQDGLGASAMGSTLPLLPPENLRVSEEWFNRLR
VSWDPPRSPVEGYKIVYQPLYVHGPVLETTVDEDVNSMLIVNLQSGTEYSVRVKASYPAG
ESEPQLINAKTLFLGVSGLSAYQVRPNSMCVQWQPLLHTTIYRISIQSTLNGQRQEVRLG
GGASRHCFYDLTPSSQYQISVHAQIQETEGPSVSITDMTLAAPTQAPTEPPTTEPPPTIP
PAKEVCKEAKADLAFLVDGSWSIGDDNFMKITRFLYSTMGSLDLIGQDGTQVAVAQFSDD
ARTEFQLSSHSNKEALLEAIQRISYKGGNTKTGRAIKHVKESIFTSEAGARRGVPKVLVV
LTDGRSQDDVNKVSKEMQVEGYIIFAIGFADADYGELVNIASKPSDRHVFFVDDLDAVKK
IEEQLITFVCEAATATCPSVLMSGNTLAGFRMMEKFGLVEKEYSTIPGVSLEPGSFNSFP
CYRLHRDALVSQPTKYLHPEGLPSDYTISMMLRLLPETPQEPFALWEILNKDNDPLVGLI
LDNSGKTLTFFNHDYKGDFQTATFEEAAIKKIFHGSFHKLHVTISKTSVKVVLDCSVVGE
KYINAAGNITTDGMEVLGRTVRSRGRQDSSAPFQLQMFDIICSTSWASRDKCCELPALRV
EEQCPPMPHACTCSQDSKGPPGPSGPPGGPGIRGARGDRGEPGVTGPQGPVGEVGPSGPP
GQPGPQGPNGLSIQGPPGALGEKGERGEIGPSGPMGVPGGPGSPGRDGPPGSRGLPGNTG
PQGQRGPPGPVGAPGAPGAPGPGGPTGPQGDQGVPGPAGTKGDKGERGDVQSQATVRAIA
RQVCEQLIQSHLSRYNSFLNQIPMQPAVSVRTVPGPPGEPGRRGTPGPQGEQGPAGRPGF
PGTNGQNGQPGERGLPGEKGERGTPGVGTQGPRGPPGSPGLPGEGRTGSQGPPGRPGNPG
TPGRPGNPGTTGPAGQPGYCDANSCLGYNVGVQQDYRNDY
NT seq
5343 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcaatggggcagatcagttggtgtttgtgggctccactggtgttactggccctt
gtttcctattaccccagtaaggcacagggtcaagttccagctccgaggaagctgcgtttc
aaagtgctgagctcaagcaaactcctggtttcatggaaggagcccaaaggagactttgac
agctatctgtttttctacaaaagtaccccaggtggtcagcagagggagatcatagtatct
aaatcagacaccagcgtgttgataacagactacagtccttctaaagtctacactttcagt
gttatcgcagtcagcggcaacaagcagagcagaccacttcagggcagatttaaaggtgaa
agaaatgagagtgacaagactgagtcccagaggttcaccgattcagctgctcctccgagg
aacgccaacgagatctctggagttgaccagtttgtgtgtcacactgaggctattgcggat
attgtgatcctggtggacggctcctggagtattggccgactaaacttcaggctggtccgt
atgttcttggaaaacctggtcaatgcctttgatgttggcattgataaaacaaggataggt
ctcgcacagtacagtggcgatcccaggattgagtggcatttaaatgctttctcaactaaa
gatgcagtcgttgatgctgtcaggaacctgccctacaaaggaggaaacaccctcacaggt
cttgcactgacttttatctttgagaactgtttcaagcctgaatctggtgcaaggcctgga
atacccaagattgggatcctgatcaccgatggaaagtcccaagatgatgttataccacca
gcagaggaactgagaaatgctggtgttgaactgtttgctatcggtgtaaagaatgctgac
gagaatgagctgcgctccatcgcctcacaaccggagagcaatcacgtctacaatgtggct
gactttaacatcatgagctctattgtaggggggctaacaaaaacagtgtgcaaacaggtg
gagcagcaggacaaagacatcaagcagaaacatataccagagacaacgggaatgccactt
aacctagtgacatcagacatcacggcccaaagctttcgggtttcatggagccatgccccc
ggaaatgtagagaaatacagagttgtttattatcccactcagggaagagacccaggagat
ccacaggaggctgtagtggtcgggagtgagtcttcagtggtgttacagcatcttagctcc
ctcactgagtaccaactggcggtgtttgctgtgtatgcaaacaaggcgagtgcagctctg
agaggatcagaaacaacgctggctcttcccacagtcaccggcctccagctgtttgatgtg
agtcacaacaccatgaaaataaaatggaacagtgcggatggagtctctggctacatgctg
ctttatgcacctctgacagatgacttggatgagaaagagataagggtgtcagatgcagtg
acggagctggagctggatgggttgatccctcacaccgaatacaccgtcactgtttatgcc
atgttcggcgaggagaccagtgaacctgttacaaaccaggaaaccacattaccactgagt
cctcccagcaacctccagttttctgacattacccacaactcggcccacatcagctgggac
cccgcacctggtggagttaatggttaccgcatcatgtgggacaagacagacggactagtc
acagacgaggtggaggttggttcagtgagttcttatgacctcggtgagctgacgtctttg
acggagtactcagtggcaatttttgccctgtacaacgagggcgaatcagaaccgctcacc
gatgcgttcaccaccactccagttcctggtcctctgaatctacactccagtgaggtccgc
acggacagctttaaggtcagctgggatcactcagccagtgacattattctctacagactc
tcctggacaccattcgatggtggcaacacaaaagaggtggtcttgagtggaagtgataac
agatacacactgaccggcctcagtccctccactgagtatgaagttatgctgacggccata
ttcaaagacaagtctgagagcgacacagtctttgtcactcaaaccacattgcccacacag
acaacaacaacttctaccaaaaccacagcggcacgtcaggctgtgagaaaccttcagctg
agtgacgagaccacccagagcttagaggcttcgtgggagctggaagaccccaacgtggag
agctacagggtcgcctacacaagcctcagcggagatcacaaggactctatgtcagtttct
ggaggtgagaggagagcagtgctcgagcctttacaatcagacaccagctacaaagtgaca
gtcactccggtgtacagcgatggacaagatggccttggtgcatctgccatgggttccaca
ttgccgctcttgcctcctgaaaatctgcgtgtgtcagaggagtggttcaatcgcctcagg
gtctcgtgggatccacctcggtctcctgttgagggttacaagatcgtctaccagcccctc
tatgttcacggtccagtattggagacaacagtggatgaagatgtgaactccatgcttatt
gtcaatctacaaagtgggacagagtacagtgtccgagtcaaggcttcctaccctgcagga
gaaagtgagccacagctaataaatgccaagacattattccttggtgtgtctggcttgtca
gcctaccaggtgcgacccaacagcatgtgtgttcagtggcagcctcttctacatactaca
atatacagaatctctatacagtccacactcaatggtcagagacaggaagtgaggctggga
ggtggagcttcccgacactgcttttacgacctcactcctagtagccaataccagatcagc
gttcacgcgcaaatacaagaaacggagggaccctctgtgtccatcactgacatgacactt
gcagcacccactcaggctccgactgaaccacccactacggagcccccacccacaatccca
ccagccaaagaggtatgtaaggaggccaaggctgacctggcgttcctggtcgacggctcc
tggtccatcggagatgacaacttcatgaagattacacgtttcctctacagcaccatggga
tcgctggatctgattggacaagatggcacccaggtggccgttgctcagttcagcgacgat
gctcggaccgaattccagctgagttctcatagcaacaaagaagcactgctggaggctatt
cagagaatcagctataaaggaggaaacactaagacaggtagagccatcaaacatgtgaag
gagtctattttcacctcagaggcgggagccagaaggggcgttcccaaagtcctggtcgtt
ctgaccgatggacgttcacaagacgatgtcaacaaagtgtccaaggagatgcaggtggag
ggctacatcatcttcgcaattgggtttgcggacgcagactacggcgagctggtgaatatc
gccagcaaacccagtgacagacacgtcttttttgtggacgatttggacgctgtgaagaaa
atagaagagcagctcattacctttgtctgtgaggctgccactgccacttgtccgtctgtt
ttgatgagcggtaacacgttggcaggtttccgtatgatggagaagtttggcctggtagag
aaggagtatagcaccatacctggagtttctctggagccgggttcattcaacagcttccct
tgctacaggttacaccgtgatgccctggtgtctcagcccaccaagtatcttcaccctgag
ggtttaccatctgactatactatttctatgatgctccgcctacttcccgagaccccacag
gaaccttttgcgttgtgggaaatcctcaacaaggacaacgacccgttagttggactgatt
cttgacaactctggaaagacactgacgttctttaaccatgactacaaaggagacttccag
actgctacctttgaagaggcagcaatcaaaaaaattttccatggcagcttccacaagctc
catgtaaccatcagcaagacgtctgtgaaggtggtactggattgctcagtggttggggag
aaatacattaatgcagctggtaacatcaccaccgatggaatggaggtcctcggaaggacg
gttcgatccagaggtagacaagacagctctgctccgttccagctccagatgtttgacatt
atctgcagtacttcctgggccagcagagataagtgttgtgagctgccagcattgagagtt
gaagagcagtgccctcccatgcctcatgcctgtacctgctctcaggacagtaaaggacct
ccaggaccatctggaccacctggtggtccaggcatacgaggagccagaggagacagaggc
gagccaggagtgacgggacctcaagggcccgtaggagaagttggcccttctggaccccca
gggcaacctggtcctcaaggacccaacggactctccattcaggggcctccgggagctctt
ggggagaaaggagagagaggagagatcggcccttccggaccaatgggagttcccggaggt
cctggctcacctggtagagatggtcccccaggatcaaggggtctgccaggtaatactgga
ccacaggggcaacgaggacccccaggaccagttggagcaccaggagcaccaggagctcca
ggaccaggtgggccaacagggccacaaggggatcaaggagttcctggtcctgctggtacc
aaaggcgataaaggagaaagaggtgatgtgcagtcccaggcgactgtgcgagctattgca
cgtcaagtgtgtgaacagctcatccagagccacttgtcgcgttacaactccttcctgaac
cagatccccatgcagccagcggtgtcagtccgaacagtgcctggaccaccaggagagccg
ggtaggagaggcacccctggtcctcagggagagcaaggtccagccgggaggccaggcttt
cccggtactaacggccagaacgggcaaccaggcgagaggggtctgccaggagagaaggga
gaaagggggactccaggggttgggactcaggggcctcgaggaccacccggatctcctggt
ttgccaggtgaaggacggacaggtagccagggcccacctggtcgacctggtaacccaggg
acaccggggaggcccgggaatccagggaccacaggaccagctggtcagcctggatactgt
gatgcaaactcctgtttgggatacaacgtgggagttcaacaggattataggaatgactac
tga
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integrated database retrieval system
