Maylandia zebra (zebra mbuna): 101465997
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Entry
101465997 CDS
T02814
Name
(RefSeq) nuclear receptor ROR-alpha
KO
K08532
RAR-related orphan receptor alpha
Organism
mze
Maylandia zebra (zebra mbuna)
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mze03000
]
101465997
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
mze03310
]
101465997
Transcription factors [BR:
mze03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
101465997
Nuclear receptors [BR:
mze03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
101465997
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
TPR_IFT122
Motif
Other DBs
NCBI-GeneID:
101465997
NCBI-ProteinID:
XP_012771520
LinkDB
All DBs
Position
Unknown
AA seq
503 aa
AA seq
DB search
MEYEEPDVPSADTPIKRGGAVSKKSHLTQIEVIPCKICGDKSSGVHYGVITCEGCKGFFR
RSQLPTVSYSCSRQSNCQIDRASRNRCQHCRLQKCLAQGMSRDAVKFGRMSKRQRDSLIA
EVERHRQQQQQQLQGDAQTVLSYPTKNRQDRSPQLLQPMAPTYSYSGDAELLTYAADIHP
YLMCSPNDSQVPAMIYRTSGISPTSRSQGRGDNAGHADIRGFDSRQSSHDMMGIHPYSGL
EDPYSLYPHSLRNIDELCASIVRSHRETSQYRVEELQALRWKLFSREEIQAYQSKSVDEM
WQHCAIRLTDAVQFVVEFAKHIPGFRMLSQNDQIALLKTGSMEVVLVRMSRFFNTENNTV
FFDGKFAGTEVFKSLACGDLIAAVFDFAHGMCALKLTEQQIALFSALVLINADRPCLEDR
SKVQRVQRSVESGLTHILHRDNQESLIHKLYQKMGVLRSLCSLHMEKLHWFSQRYPLTAH
SLFPPLYKELFASEAELLPGTTH
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggaatatgaagagcccgacgtgccctccgctgacacccccatcaagagaggaggtgcc
gtgtccaagaagagtcatttgacccagattgaagttatcccatgtaaaatctgtggtgat
aagtcctctggagttcattatggagtcatcacttgtgagggctgcaagggatttttccgg
cgcagccagctgcctaccgtatcttactcctgctccaggcaaagtaactgccagatcgac
cgggccagccgcaaccgctgccagcactgccgtctacagaagtgcctggcccagggcatg
agcagagatgcggtgaagtttggacggatgtccaagcgtcagcgcgactctctgatcgct
gaagtggaaaggcaccggcagcagcagcaacagcagcttcagggagacgcccagaccgtg
ttgtcctaccccaccaagaaccgccaggaccgctccccccagcttcttcagcccatggcc
ccgacctactcatacagcggagatgccgaactgttgacctacgccgctgatattcaccct
tacctgatgtgctccccgaacgactcacaggtgcctgctatgatctaccgcacctctggg
atctctcccacctcaagatcccaagggaggggagacaacgccggtcatgctgatataaga
ggatttgactccaggcagtcgtctcatgatatgatggggattcatccttatagtggtctg
gaggatccatacagcctgtatcctcactccctgcgaaacatagatgaactgtgtgccagc
attgtgcgttcccacagagagaccagtcagtacagagtggaagagctccaagctctcagg
tggaaactcttcagcagagaggagatccaagcataccagagcaaatcagtagatgagatg
tggcagcactgcgctatccgacttactgatgccgtccagttcgtggtggagtttgcaaaa
cacatcccgggtttccgtatgctgagccagaacgaccagatcgcccttttaaagactggc
tccatggaggtggttctggtcagaatgagccggttctttaacacagagaacaacactgtg
ttctttgatgggaagtttgctggaactgaggtcttcaaatctttggcttgtggtgattta
atcgcagcagtatttgacttcgcacatggcatgtgtgccctaaagctgactgagcaacag
attgctctcttcagtgccctggtgctcatcaacgcagatcgtccgtgtctggaggacagg
agcaaagttcaaagagttcaaagaagcgtggagtcgggactgacacacattttgcaccga
gacaatcaagaaagtttgattcacaagctgtaccagaagatgggggtgttgcgctcgctg
tgcagtctgcacatggagaagcttcactggtttagtcagcggtacccgctcacagctcac
tctctgtttcctccgctctacaaggagctgttcgcatcagaggcagagcttctgccgggg
accactcactga
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