Maylandia zebra (zebra mbuna): 101466135
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Entry
101466135 CDS
T02814
Symbol
cpsf2
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101466135 (cpsf2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mze03019
]
101466135 (cpsf2)
Messenger RNA biogenesis [BR:
mze03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
101466135 (cpsf2)
U7-dependent histone pre-mRNA processing factors
101466135 (cpsf2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B
Beta_lactamase3
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
101466135
NCBI-ProteinID:
XP_004550521
UniProt:
A0A3P9AXA4
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Position
LG15:complement(14353887..14362985)
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AA seq
787 aa
AA seq
DB search
MTSIIKLTAVSGVLEESALCYLLQVDEFRFLLDCGWDENFSTEIIDAMKRHVHQVDAVLL
SHPDPIHLGALPYAVGKLGLNCTIYATIPVYKMGQMFMYDLYQSRNNSEDFTLFTLDDVD
AAFDKIQQLKYSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEIVYAVDFNHKR
EIHLNGCSLESLSRPSLLITDSFNAAYVQPRRKQRDEQLLTNVMETLRGDGNVLIAVDTA
GRVLELAQLLDQIWRTKDAGLGAYPLALLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRN
NPFQFRHLTLCHSLADLARVPSPKVVLCSQPDLESGFSRELFIQWCQNAKNSIILTYRTT
PGTLARYLIDNPGEMMLDLEVKKRVKLEGKELEEYLEKEKLKKETAKKLEQAKEVDVDSS
DESDMDDDLDQSAVVKTKHHDLMMKGEGSRKGSFFKQAKKSYPMFPTHEERIKWDEYGEI
IRLEEFLVPELQATEEEKSKLESGLTNGDEPMDQDLSVVPTKCISSIESLEIRARVMYID
YEGRSDGDSIKKIINQMKPRQLVIVRGPPEASLDLAESCKAFSKDIKVYTPKLQETVDAT
SETHIYQVRLKDSLVSSLQFCKAKDTELAWIDGVLDMRVVKVDTGVILEEGVKDEAEESE
LAMDIAPDLDIDPINIAVTAQRAMKNLFGEDEKEFSEESDVIPTLEPLPPNEISGHQSVF
INEPRLSDFKQVLLREGIQAEFVGGVLVCNNMVAVRRTEAGRIGLEGCLCDDYYKIRELL
YQQYAVV
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccattatcaagctgacagccgtgtcaggggttctggaggagtctgccctttgt
tacctgctgcaggtggatgaattccgcttcctcttggactgcgggtgggatgagaacttc
tccacggaaatcatagatgctatgaagagacatgttcatcaggtcgacgctgtgctgctc
tcccatcccgaccccatacacttgggagccctgccatacgctgtgggcaaactggggctg
aactgtactatctatgccacaattcctgtctacaagatggggcaaatgtttatgtacgat
ctgtatcagtcccgaaacaacagtgaagattttacactgttcacacttgatgatgtggat
gctgcttttgataagatccagcagctgaaatactctcagattgtcaatttgaaaggaaaa
gggcacggtctttccattactcctcttccagccggtcacatgattggaggcactatttgg
aaaattgtgaaggatggggaggaggagattgtttacgccgtggactttaaccacaagaga
gaaatccacctcaatggctgctcactggagagcctcagccgtccatccttacttattaca
gactccttcaatgcggcgtatgtacaaccacgtcgtaagcaaagagatgagcagctactt
accaatgtgatggagaccttgcgtggtgatggcaatgtccttattgccgtagatacagct
gggcgtgtgctggaactggctcagctcctggaccagatttggaggacaaaggatgctggg
ctcggagcttacccactcgctctgcttaacaatgttagctacaatgtagtggagttctca
aagtcccaggtggagtggatgagtgacaagctcatgaggtgttttgaggacaagaggaac
aacccgttccaattccgacatttgaccctgtgccacagtctggcagacctggcccgagta
cccagccccaaggtggtgctctgcagccaaccggaccttgagtcagggttttctcgagaa
ctttttatccagtggtgtcaaaatgcaaaaaattccatcatcctgacgtaccgcaccaca
cctggaaccttagctcgctacctcatcgacaaccctggagaaatgatgctggatctggag
gtcaagaagagagtaaaactcgaaggcaaggagctggaagaatacctggaaaaggagaaa
cttaagaaagaaactgctaaaaaacttgaacaagcaaaagaggtggatgtggactccagc
gatgagagcgatatggatgatgatctggatcagtcggctgtagtaaaaaccaaacaccac
gatttgatgatgaagggcgagggcagccgtaaaggcagtttcttcaaacaggccaaaaag
tcatatccaatgttccccacacacgaggagagaatcaaatgggacgagtatggagaaatc
atcaggctagaggagtttctggttcctgaattgcaagccacagaggaggagaagagcaaa
ttagaatctggtttgaccaatggagatgaacctatggaccaggatctgtctgtagtcccc
acaaaatgcatctcaagcatagaaagtcttgaaataagagcaagggtcatgtacatagac
tacgagggtcgctctgacggggactccataaagaagattatcaatcagatgaagcccaga
cagctggtgattgttcgtgggccaccagaagccagtctggacctggcagagtcctgcaag
gcttttagcaaggacatcaaagtctacacgcctaaactgcaggaaactgtggatgccact
agtgaaacccacatctaccaggtgcggttaaaagactccttggtgagctctctgcagttc
tgcaaggccaaagacacggagctagcgtggattgacggtgtgctggacatgcgtgtagtg
aaggtggataccggcgtgatactggaggagggtgtgaaagacgaggcggaagaaagcgag
ctggctatggacatcgcccccgatcttgacattgaccccatcaacatagcagtcacggca
cagcgagccatgaagaacttgttcggagaggacgagaaggagttttccgaagagagtgat
gtcattcccacgctggaaccactgccaccaaacgagatttcagggcatcagtctgtgttt
atcaatgagcctcgtctgtctgacttcaagcaagtcttgctgagagagggcatccaggcc
gagtttgtgggaggagtgctggtatgcaacaacatggtggccgtccgcagaacggaggcc
ggacgcattggcctggaaggctgcctgtgtgacgactactataagatccgggagctcctg
tatcagcagtacgctgttgtatag
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