Maylandia zebra (zebra mbuna): 101466491
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Entry
101466491 CDS
T02814
Symbol
smc6
Name
(RefSeq) structural maintenance of chromosomes protein 6
KO
K22804
structural maintenance of chromosomes protein 6
Organism
mze
Maylandia zebra (zebra mbuna)
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mze03400
]
101466491 (smc6)
DNA repair and recombination proteins [BR:
mze03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
101466491 (smc6)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
Laminin_II
AAA_21
ODAD1_CC
AAA_29
SMC_hinge
DUF1664
Crescentin
AAA_13
COG6_N
DUF1110
ATG17_like
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
101466491
NCBI-ProteinID:
XP_004541824
LinkDB
All DBs
Position
LG15:complement(10160550..10172751)
Genome browser
AA seq
1088 aa
AA seq
DB search
MSKRKGTSVNENPNKRSRSVNESENAADSDQEDPILSNLQCGAEVVSDAGIVESITLKNF
MCHSLLGPFTFGSNVNFVVGNNGSGKSAVLTALIVALGGNAQATNRGSSLRGFVKEGESS
ADVSITLRNKGRDAYKPEVYGSAIILDLRITRDGLRTYKLRSKSGQLISTKKEELVSILD
NFNIQVNNPVSVLTQEMSKYFLHSKGEGDKYKFFMKATQLEQMREDFIYIKTTKHLTEDK
VEQHSECLKDLKRKYLEKEDRYRSLASLDEMNTKLEELQKQMAWALVTEMEKDLEPMKEK
LQADRRSTEKYDDKVNEWKNKVDEAEKKYKQVQEQLERITQQVQELQPKCAELKTESQKR
NNLLKSSEVTVHRCKANLRDLEKDKTQLMSRIKDLKLSISQKTGAESKARAERIEQIQTE
LENLKHQISTLGQQIDQYQHAISRAKEEQGKMRREQEVLQRSIEANRRNLQTMESSRSNR
LQRFGEQMPALLNAIQESHRRGHFKHRPRGPLGYLISLKDPELALAVEVCLKGQLLAFTC
DNYEDEKVLQGLMAKMFQGGRRPAIITSNFISQVHDTRRKAVSHPNYPSVLQALEIEDPV
VANCLIDQKGIESILLIKNRTEARRVMQSKNPPANCIHAFSKDGDQIFTNRSYAAEQTRA
NYLSGDVEEEIRHLQRELENQKGQASRFQQQMRKLDDDVKENEGLLRRAHQEQKTIKDKA
TKLQLELTDLQNVEEPQSEDLRPLEEDLHEIVTKIKSKRVELDEGLAQMADLKGSYEKAE
QEYKQHKECINTIAEEADSVKEDLSKTDQEVIKCKHHKKHYDEKRSAHLHNIQTLEGNLK
SKEKEYEMSVAKAKEICLERVESRRSARSLDSEISRLKLKITSQKEQQGDREEIVRQYHE
ALESYKNMTQQMKNLNSFIKSLDSVMNHRLQAYAELRRFLSARCKYYFDSMLAQRGYSGS
MIFDHKNETLSISVQPGQGNKADLSDMRLLSGGERSFSTVCFVLSLWAITEAPFRCLDEF
DVYMDMVNRRISMDMMLKVAASQRYRQFIFLTPQNMSSLPESKIIRILRLKDPDRGQRNT
QRSEDEDQ
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaaggaagggcacctccgtcaatgaaaatcccaacaagagatccagatctgtg
aatgaaagtgaaaatgctgctgacagtgaccaggaagatcccattctgagtaatttgcag
tgtggtgcggaggtggtgagtgatgctgggattgtagaaagtatcactctgaagaatttt
atgtgccactcgctccttggcccgtttacctttggttccaatgtcaactttgttgttggc
aacaacggaagtggaaagagcgccgttttgacagctctcatagttgccttaggcgggaat
gcccaggctacaaatagaggatcatccctcaggggttttgtgaaggaaggagaaagttca
gctgatgtttccatcacattgcgtaataaaggaagggatgcttacaaaccagaggtgtat
gggtcggctattattctagatctaaggataactcgggacggactgagaacatataagctg
agaagtaaatcaggtcagctaatctcaaccaaaaaggaagaacttgtctctattctggat
aatttcaatattcaggtcaacaatcctgtatcagttctcactcaggaaatgagcaagtac
ttcctacattctaaaggagagggggacaagtacaagttttttatgaaagccacccagttg
gagcagatgagagaggactttatctacatcaaaaccactaagcatctcacagaggataaa
gttgagcaacacagtgaatgcttgaaagacctaaaacggaagtacctggagaaggaggac
cgttacaggagcctggcttcacttgatgaaatgaacaccaaactggaggagttgcagaag
cagatggcttgggctttggtgactgagatggagaaggacttagagccaatgaaggagaag
ctgcaggcagacagacgatccacagagaaatatgacgacaaggtgaacgaatggaagaat
aaggtcgatgaagcagagaaaaagtacaaacaggtccaggaacagctagagaggatcaca
cagcaagtccaggagcttcaacctaaatgtgctgagctcaagactgagtcgcagaaacgc
aacaaccttttaaaatccagcgaggtcacagtccacagatgcaaagccaacctgagagac
ttggaaaaggacaaaactcagctgatgtcgaggataaaagatctcaagctgagcatcagt
cagaaaacgggagcagagagcaaagccagagcagaaaggatcgagcagatccagactgag
ctggaaaacctgaagcatcagatctctacactgggccaacagattgaccagtatcagcat
gccatcagtcgcgccaaagaagaacaaggaaaaatgaggagagagcaggaggttctccag
aggtccattgaagccaacaggaggaatctgcagacaatggagagcagtcggtccaatcgg
ctgcagcgttttggagagcagatgcctgcgctgctaaacgccattcaggaatctcacaga
agaggccatttcaagcacagacctcgaggaccgttgggttacctaattagtctgaaggac
ccagagctcgcactggccgtagaagtatgtcttaaaggccagctgctggccttcacatgt
gataactatgaagatgagaaggttctgcagggcctcatggccaaaatgtttcaaggaggt
cgcagacctgctatcataactagcaatttcatctcacaagttcatgatacaagaagaaag
gctgtcagtcatccgaactacccctccgtgcttcaggctctagaaattgaggacccagtt
gtggccaactgtctgatcgatcagaagggcatagagagcattctgctcattaagaatcga
acagaagctcggagagtgatgcagagcaaaaatcctcctgcgaactgcatccatgctttc
tctaaggatggagatcagatctttactaaccggagttatgctgctgagcagactagagcc
aactatctctcaggagatgttgaggaggagatcagacacttacagagggagttggaaaac
cagaaaggtcaagcatcacgcttccagcagcagatgagaaagttggatgacgacgtcaag
gaaaatgaaggcctactaagaagagcccatcaagagcaaaagaccattaaagacaaggcc
acaaagttgcagctagagctcacagatctacaaaatgttgaagagcctcagtcagaggac
ctcaggcccctggaggaggatcttcatgagattgttaccaagatcaagtccaagcgagtg
gagttagatgagggactggcccaaatggccgacctcaagggttcttatgaaaaggcagag
caggaatacaagcagcacaaagagtgcattaacactatcgcagaggaggctgactcagtc
aaggaggatctcagtaaaactgaccaggaggtgataaaatgcaaacatcacaagaaacac
tatgatgagaaacgcagtgcccatctccacaacattcaaactcttgaaggcaaccttaaa
agcaaagagaaggagtacgagatgtcagtggccaaagccaaagagatttgtctggaacgt
gtggagagccgtcggtcagccaggagcctggacagcgagatcagtcgtctcaagcttaag
atcacttcacagaaggaacaacagggagaccgtgaggagattgtgaggcagtaccacgag
gctctggagagctacaagaacatgacacagcaaatgaagaacctcaacagcttcatcaaa
agcctcgacagtgttatgaaccacagacttcaggcttatgccgagctcaggaggttcctg
tcagcccgctgtaaatactactttgatagcatgttagcccagagaggctacagtggaagt
atgatctttgatcacaagaacgaaaccctctccatttccgtgcagccaggccaaggaaac
aaggctgacttgagtgacatgcgcttgctgtccggaggggagcgctctttctccactgtt
tgttttgtcctctctctttgggcgatcacagaggcgcctttccgctgtcttgatgagttt
gatgtttacatggacatggtgaacagaaggatatccatggacatgatgctgaaggtggct
gccagtcagcgctacagacagttcattttcttaaccccacagaacatgagttcccttcca
gaaagcaaaatcatccgcatcctccgcctcaaagatccagaccggggccagagaaatacg
cagagaagtgaagacgaggaccagtaa
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