Maylandia zebra (zebra mbuna): 101466679
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Entry
101466679 CDS
T02814
Symbol
ercc3
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPB isoform X1
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze03022
Basal transcription factors
mze03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
101466679 (ercc3)
09124 Replication and repair
03420 Nucleotide excision repair
101466679 (ercc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mze03021
]
101466679 (ercc3)
03400 DNA repair and recombination proteins [BR:
mze03400
]
101466679 (ercc3)
Enzymes [BR:
mze01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
101466679 (ercc3)
Transcription machinery [BR:
mze03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
101466679 (ercc3)
DNA repair and recombination proteins [BR:
mze03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
101466679 (ercc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_34
AAA_22
Motif
Other DBs
NCBI-GeneID:
101466679
NCBI-ProteinID:
XP_004543427
UniProt:
A0A3P9B8N7
LinkDB
All DBs
Position
LG1:complement(25522600..25531312)
Genome browser
AA seq
783 aa
AA seq
DB search
MGKKDKGDREKKSKKRFYEEEDDEEEAVGSESQEAIPAAAGKQVDESSTKLDEYGAKDYR
AQMLLKNDHSSRPLWVAPDGHIFLEAFSPVYKYAQDFLVAIAEPVCRPNHIHEYKLTAYS
LYAAVSVGLQTSDIVEYLQKLSKTSVPDGIVQFIKLCTVSYGKVKLVLKHNRYFVESAFP
DVIQRLLQDNVIRECRLRAADGTDAELITEVIHSKSAISKSVQEKEGTSSSQQPSDGETS
TQQVPEDIFSYYEQMDKEEEEEEETQTVSFEIRQEMIEELQKRCIQLEYPLLAEYDFRND
TVNPDINIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKR
CLVLGNSSVSVEQWKSQFKMWSTIDDSQICRFTSDAKDKPIGCSVAISTYSMLGHTTKRS
WEAERVMEWMRSQEWGLIILDEVHTIPARMFRRVLTIVQAHCKLGLTATLVREDDKIVDL
NFLIGPKLYEANWMELQNNGYIAKVQCAEVWCPMSPEFYREYVAIKTKKRILLYTMNPNK
FRACQFLIRFHERRNDKIIVFADNVFALKEYAIRLNKPYIYGPTSQGERMQILQNFKHNP
KINTIFISKVGDTSFDLPEANVLIQISSHGGSRRQEAQRLGRVLRAKKGMVAEEYNAYFY
SLVSQDTQEMAYSTKRQRFLVDQGYSFKVITKLAGMEEEDLMFSTRDEQQQLLQKVLAAS
DIDAEEEVVAGEVGARPQFSRRTGTMSSMSGADDTIYMEYQSRSSKALAAGKSVHPLFKR
FRK
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaaaaggacaaaggagaccgggaaaaaaagtccaagaagcgtttctatgaggaa
gaagatgatgaagaagaggcggtggggagcgagtctcaagaggccatacctgctgctgca
ggaaaacaagtggacgagtctagtacaaaactagatgaatatggagccaaagattaccgt
gctcagatgctgttaaaaaatgatcactcctcacgtccactctgggtggctccagatgga
cacatctttctggaagctttttctccagtgtataaatatgcccaggatttcttggtggcc
attgcagagccagtatgcagacctaaccatatccatgagtacaagctaactgcctactcc
ttatatgcagctgtcagtgtggggctccagacctctgatattgtggagtatctgcagaag
ctcagcaagacatctgtacctgatggaatcgtgcaattcataaagctctgcacagtgagc
tacggcaaagtcaagctggtgctcaagcacaataggtattttgttgagagtgccttccct
gatgtgatccagcgacttctgcaagacaatgtgatccgtgaatgtcgtctccgcgctgca
gatggaacagatgctgagcttattactgaagtcatccacagcaagtcagcgatttctaag
tctgttcaagaaaaagaaggcacttccagctcacagcagcccagtgatggggaaacctca
acccagcaggtccctgaggacatcttcagctactatgagcagatggataaagaagaagag
gaggaagaggagactcagactgtgtcctttgaaattcgccaggagatgattgaagagctg
cagaagcgttgtattcagctggagtaccccctcctggcagagtacgacttccgcaatgac
acagtcaaccccgacatcaacatagaccttaagcccacggctgtgttgaggccctatcag
gaaaagagtctacgcaaaatgtttggaaacggtcgcgcccgctcaggagtcattgtgctg
ccatgtggagcgggtaaatccctggtcggggtgacagcggcctgcacggtgcgcaaacgc
tgcctggtgctgggtaattcctctgtatctgtggagcagtggaagtcccagttcaagatg
tggtccactattgacgactctcagatctgccgcttcacttctgatgcgaaggacaagcct
ataggttgctcggtggccatcagcacctactccatgctgggtcacaccaccaagcgctcc
tgggaagctgaaagggtcatggagtggatgcggagccaagagtggggtctcatcatactg
gatgaagttcacactatccctgcaaggatgtttcgtcgtgtcctgactatagtccaggcc
cactgcaaacttggcctcactgccacattggtcagagaggatgataagattgtggacctc
aatttcctaattggaccaaagctatacgaggccaactggatggaactgcagaacaatggc
tacattgctaaagtccagtgtgcagaggtgtggtgcccgatgtctccggagttttacaga
gagtacgttgccattaagacaaagaagcggatcctgctttacacgatgaaccccaataag
ttccgtgcgtgtcagtttctcattcgcttccatgagcgacggaatgacaaaatcattgtg
tttgctgataacgtgtttgccttgaaagaatatgccattcgtctcaacaagccttacatc
tatggtccgacctctcagggggagcgaatgcagattttacagaacttcaaacacaacccc
aagatcaacaccattttcatctcaaaggttggagacacttcatttgacttgccagaagca
aatgtgctgatccagatctcgtcccacggtggatcacgcagacaggaggcccagagactt
gggagagtcttaagagccaaaaaaggaatggtggcagaagagtacaatgcatacttctat
tcactggtgtcccaggatacccaggaaatggcttactccaccaagaggcagaggtttctc
gtggaccagggatacagctttaaggtaatcacaaagctggcaggtatggaggaagaggac
ttgatgttctccaccagagatgagcaacagcagctgcttcagaaggtcctcgctgcttct
gacatagatgccgaggaggaggtggtggcaggggaggtgggcgcacgacctcagttctca
aggcgaaccggcaccatgagctccatgtccggagcagatgacaccatctacatggaatat
cagagcagaagcagcaaagcccttgcagcgggcaaaagcgttcatccactgttcaagcgc
ttcagaaagtag
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integrated database retrieval system
