Maylandia zebra (zebra mbuna): 101467256
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Entry
101467256 CDS
T02814
Name
(RefSeq) hypoxia-inducible factor 1-alpha isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze04137
Mitophagy - animal
mze04140
Autophagy - animal
mze04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
101467256
04137 Mitophagy - animal
101467256
04148 Efferocytosis
101467256
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mze03000
]
101467256
Transcription factors [BR:
mze03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
101467256
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Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_11
PAS_3
PAS
HIF-1
PAS_9
PAS_4
Motif
Other DBs
NCBI-GeneID:
101467256
NCBI-ProteinID:
XP_024660720
UniProt:
A0A3P9DEP9
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All DBs
Position
LG14:complement(32853824..32875462)
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AA seq
676 aa
AA seq
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MEKKEGVVAVKRTSTEQRKLRSRDAARCRRSQETEVFYELAHTLPLPRRVSTHLDKAAIM
RVTLSFLRMHHLLRSDKNLKEEPKEVAEEVKVEEEEEKDEDPMDAFYPQALAGFIMVMTE
EGDMIYLTENVNKHIGITQLELLGQSIYDFVHPCDQEELRDLLTPRPGLSKKARTEQTSE
RNFFMRMKSTLTTRGRTVNIKSATWKVLHCTGHIRPFGSGSASPPAGRVMTLLCEPIPHP
SSVEFPLDTCTFLTRHSMDLRFTHCEGRVAELVGYKPDDLIGRSGFEFLHALDSDHINKS
LHTLLSKGQVSTSQYRFLANNGGYVWAETQATVLYNSKTSQPDAIVCLNFILSSVEQPDV
IFSMEQTRCSSIPKVELADEDSGTADMCESKTDSTVSTEVEDVDSDSSSSAKLFMELREK
PEELLQLAPDAGDTIVPLSPGSVELSFASPPSPNLVPEHPQDLCTPQLRKLLAPIFDPIT
PPPSASSSSSSSSPSSSPKPEQSRSEEVMDTSEVEKFFAFWPEDAQKKDTPVKIEGMDLD
MLAPYISMDDDFQLTFLSSMTEEAEKPSETSATSRKRTHDSAEEMLSPVMLQDKRQKKDP
SMEEELLLTHKLLDSLDETDQPDLIMDPGPESRSHLLTDRDPVLGGMQGLCDTAALMKDI
FVSRPTLLSPPLSPMT
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggagaagaaggagggggtcgttgcggtcaaacggaccagcacagaacagagaaaactg
cgctctcgtgatgcggccagatgcaggcggagtcaggagaccgaggtcttttatgaactt
gcccacactctgccgctcccacgccgagtgtccacccacctggacaaagccgccatcatg
agagtgaccctcagcttcctgcgaatgcaccacctgcttcgatcagataagaatctgaaa
gaagagcctaaagaggtggcggaggaggtgaaggtggaggaggaggaggagaaggatgaa
gatccgatggatgctttctatcctcaggcgctggctggcttcatcatggtgatgactgag
gagggagatatgatctacctgacagagaatgtcaacaagcacattggcatcacacagctg
gagctgctgggtcagagcatctatgactttgttcatccctgcgatcaagaggagctcaga
gacctgctgactccacgtccaggtctgagtaagaaggcacggacagaacagacgagcgag
aggaacttctttatgcgaatgaagagcacactgaccaccagggggcgcaccgtcaacatc
aaatctgccacctggaaggtcctccactgcacaggccacattcgtccctttggcagcggc
tctgcgtcgccccctgcaggcagagtcatgaccctgctgtgtgagcccatcccacaccca
tccagcgtggagttccctctggatacttgcaccttcctcacccgtcacagcatggacctg
cgcttcacccactgcgagggcagggttgcagagctggtgggatacaaacctgatgatttg
attggacgctcaggcttcgagtttcttcacgcactcgactcagatcacatcaacaagagc
ctgcacacattgctctccaaaggtcaagttagcaccagccagtaccgtttcctggcaaac
aacggtggctacgtgtgggcggagactcaggccactgtgttgtacaacagtaaaacgtcc
cagccggatgccatcgtctgcctcaacttcatcctcagctctgtggagcagccagatgtg
attttctccatggagcagacccgctgtagtagcatccctaaagttgaactggcagatgaa
gactccgggactgccgacatgtgtgagtctaaaactgacagcactgtttccactgaggtt
gaagatgtggattcagattccagcagcagcgcgaagctcttcatggagctgcgggagaag
ccggaggagctgctgcagttggctcctgatgccggagacaccatcgtacctctgagtcca
ggttctgtcgagctctcatttgccagtccacccagtccaaacttggtgcccgagcaccct
caggatctgtgcaccccgcagctgagaaaactcctcgcacccatctttgaccccatcact
cctcctccatctgcatcctcatcctcttcttcatcatcgccaagctcctcacctaaaccc
gagcagagccgcagtgaagaggtgatggacaccagcgaggtggaaaagttcttcgccttt
tggccagaagatgcccagaagaaagataccccggtgaagattgaggggatggacctggac
atgttggctccgtacatctccatggacgatgacttccagctgaccttcctcagcagtatg
accgaggaagctgagaaaccttccgaaacttcagcaacaagcaggaaacggactcatgac
tctgctgaagagatgctgtcaccagtgatgctccaggacaagagacagaaaaaggatcct
tccatggaggaggagcttcttctcacccacaaactacttgacagtctggacgaaaccgac
caaccagatctgatcatggacccgggaccggagagtcgcagccatctgctcacagacaga
gatccggtcttaggaggcatgcaaggactgtgtgacactgcagctctgatgaaggacata
tttgtatcccgcccgactctcctctcgccacctctctcacctatgacctaa
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