Maylandia zebra (zebra mbuna): 101467532
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Entry
101467532 CDS
T02814
Name
(RefSeq) collagen alpha-5(IV) chain
KO
K06237
collagen type IV alpha
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze04382
Cornified envelope formation
mze04510
Focal adhesion
mze04512
ECM-receptor interaction
mze04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101467532
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
101467532
09142 Cell motility
04820 Cytoskeleton in muscle cells
101467532
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
101467532
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mze04147
]
101467532
00536 Glycosaminoglycan binding proteins [BR:
mze00536
]
101467532
Exosome [BR:
mze04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
101467532
Glycosaminoglycan binding proteins [BR:
mze00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
101467532
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
101467532
NCBI-ProteinID:
XP_004542676
LinkDB
All DBs
Position
LG18:complement(15361563..15382793)
Genome browser
AA seq
1664 aa
AA seq
DB search
MGTPTFITPIILLAAMLVMTDGKKCVCNGRSRCRCDGVKGSRGDKGFPANPGSPGPPGRP
GPDGPTGPMGLKGNTGHDGPAGPKGDPGLEGKEGFAGSHGLPGVPGLQGPPGPPGAPGCN
GTDGEDGPPSIHGTSGLDGLPGPPGQPGPKGESWIQGSSQPGPRGPPGRDGQPGDPGLPG
YKGQPGEPGPRGSVGFPGRRGPPGPKGQEGISGAPGPQGPKGRQGPPGPPGPKGRITELV
SGGLVLEGLKGNKGDIGEKGCKGSTGEPGYGQYSKGAKGGRGLPGPEGKPGKDGDPGPHG
FVGRPGPRGDPGYPGVPGVPGEKGNRGLPGPSGDTYVTEPIKGYKGDPGHQGPPGLPGPR
GIVGFPGPRGPPGLGIDVHGLRGPNGLPGLKGDSGEPGADYIGPPGPDGEPGDQGPPGDQ
GPPGIPEDRTNRVTKGLPGIKGVNGLPGLMGYDGVFGMKGQKGDPCYECTGSGFPGPPGP
QGETGPPGFNQPRGDKGDPGFPGPKGLPGRPGPIGEAGFPGRKGEKGESYSFGAPGPKGE
KGDQGQLGRPGDPGLPGLPGLPGRKGNPGLPGDPYFFSGETGDRGVQGPPGPLGRPGPDG
YSGLVGYGPAGPPGMKGDNGVSGFPGQPGIPGEKGEPGVIYSKGLPGPPGLKGWPGSPGS
PGHPGAPGHLGPPGIPGQKGERGPLSFPGMPGKQGQKGDKGQPGVPGPPGRGSPGQPGQE
GPPGPPGPKGDSNLGHSGPPGFPGLPGEDGDPGPAGDPGNPGLPGYPGLTGSPGFPGEKG
VKGSEGLPGLPGSKESCKGLPGPSGEPGPSGSEGPQGLNGFPGEKGNQGLPGFGLPGPAG
EPGFPGPSRPGSQGHHGQKGIKGQNGLPGQPGPRGDPGPDGLPSGYGPDGLPGIVGPPGQ
RGDSGPDGPRGPPGPPGMNGDQGPKGAPGAPSPQNYTANSGDPGPPGNPGLAGPSGDPGR
NGSKGWRGKVGAPGDPGPRGSLGDPGLDGLLTSPGFKGHPGAPGDAGLRGPPGPKGIKGD
RGIPGKPGRDGDQGKTGFKGATGEPKYNGYGPPGPAGQKGEQGLTNTNLMKGQKGQPGIA
GTEGLPGIFGLKGDPGPTGLNGPSGSQGPEGSDGPPGSKGQRGPNGPQGNVGLTGNRGLP
GPKGSQGLDGIPGPPGQKGETILIEGSPGKRGDPGQPGPPGNPGLPGLSVTGIHGLTGDK
GIPGPQGILGPRGSPGREGACLPGYRGDPGEPGYPGRKGYPGPPGPPGTAVPGLKGDRGD
PGLPGSQGNLGEPGDPGPQGPPGAIGRPGGPGVRGDPGLPGFPGPAGKIGEPGYIPGPPG
QPGVQGIPGPPGRKGEATFRKVIHEPGAQGSPGARGTCGPPGRTGPPGPPGPPGQHGIKG
MQGFSPPGLPGFTGYKGDKGRAGLPGPNGRPGTPGHKGPAGLPGRTGPSYADSFLIVRHS
QSIHPPECPHGTSFIYSGYSFLFINGYKRAHGQDLGTTGSCLPRFSTMPFLFCDTENACR
YASRNDYSYWLSTETPMPMNMVSISGEMLKSYISRCSVCETTSNVIAIHSQRTLIPECPR
GWESLWTGYSFIMQTGAGAEGSSQPLISPGSCLENFRQVPFIECHGRGTCNYYPDSYSYW
LASLDPNNMFGKPIPQTVKGPFLESIISRCRVCRKPGHQGEGSR
NT seq
4995 nt
NT seq
+upstream
nt +downstream
nt
atgggaactccaacattcataactccaataatcttgttggctgcaatgctggtgatgact
gatggaaaaaagtgtgtgtgcaacggaagatcaaggtgccgctgtgatggagtgaaaggc
agcaggggagacaaaggatttccagcaaatccaggttcccctgggccaccaggacgtcct
ggaccagatggtcccactggcccgatgggactaaagggaaacactgggcatgatggacca
gcaggaccaaaaggcgatccgggactcgaaggcaaagaggggtttgctgggagtcatggc
ttaccaggtgtcccaggcttacaggggcctccgggcccaccgggagccccaggctgcaat
ggaacagatggggaagacggacctcccagtatacatgggacctctggtcttgatggactg
ccaggtccaccgggtcagcctggacctaagggtgaatcttggatacaaggcagttcacaa
ccagggccccgtggaccacctgggagggatggacagccgggagatccaggtttacctgga
tacaaaggacaacctggtgaacctggaccaaggggatctgttggctttcctggacgtcga
gggcctccaggaccaaagggtcaggaaggtattagtggtgccccaggacctcaaggacct
aaggggagacaaggcccaccaggtccacctggaccaaaaggtcggatcacggagcttgtc
tcagggggtctcgtgttagaggggttaaaaggaaacaagggagatataggagaaaagggc
tgcaaaggttcaacgggagaacctggttatggacaatatagtaaaggcgcaaaaggaggc
agaggattaccaggtccagagggtaagccaggcaaggatggtgatcctggaccacatgga
tttgtgggaagacctggccccagaggggatccaggatatccaggagtgccaggagtgccg
ggtgaaaagggaaataggggtctgcctggcccaagtggagatacatatgtgactgagcca
atcaaaggatacaagggagatcctggtcatcagggcccacctggacttcctgggcctcgg
ggtattgtgggctttcctggaccacgaggacctccaggattaggaattgatgtgcatggc
ctacgtggtcccaatggccttccaggcctaaaaggtgattctggggagcctggggctgat
tatatcggacctccgggtccagatggagagcctggtgaccaaggacctcctggagatcag
ggcccacctggaatccctgaagacagaactaacagagttaccaagggtctgccaggaatt
aaaggagtgaatggattgcctggactcatgggatacgatggggtgtttggaatgaaagga
caaaagggggatccctgttatgagtgtactggatcaggattcccaggacctccaggtccc
cagggtgaaactggcccgcctggcttcaatcagcctcgaggtgataaaggtgatcctggt
ttcccaggacctaaaggcttaccaggaagacctggtccaattggtgaagcaggttttcca
ggtcgaaaaggagagaagggagagtcgtattcctttggtgctcctgggccaaagggagaa
aaaggggaccagggacagcttgggaggcctggggatccgggtttacctggacttccagga
ttgccaggtcgcaaaggcaatccagggcttccaggggatccgtatttcttctctggtgaa
acgggagaccgtggagtccaaggcccaccaggccctttaggcagaccaggaccagacggc
tactctgggctagtgggttatggacctgctgggcctccaggaatgaaaggagataatggg
gtatctggctttccagggcagccaggaattccaggagaaaagggggaacctggagtcata
tacagtaaaggacttcctggcccacctggattgaagggttggccaggttcacctggaagc
ccaggtcatccaggggctccaggtcatctaggaccaccaggtataccaggccagaaagga
gaacgtggcccgttgtcatttcctggaatgccagggaaacaaggacagaaaggtgacaag
ggccaaccaggtgtcccaggccctccaggtagaggttccccaggtcagccaggccaagaa
ggccctcctggtcctccaggaccaaagggtgatagcaaccttggacactctgggcctcca
ggcttcccagggcttccaggtgaagatggagatcccgggcctgcaggtgatcctgggaat
cctggcttacctggatatccagggctaactggcagtcctggttttccaggagaaaaggga
gtaaagggttctgaagggcttccagggctacctggtagcaaagaatcatgtaaaggcttg
cctgggccaagtggagaaccaggaccaagtggttctgaaggacctcaaggacttaatggc
tttcctggtgagaagggaaatcaaggtttgcctgggtttggtcttcctggccctgctggt
gaacctgggttccctgggccatcaagaccaggttcacaaggacatcatggacaaaaagga
atcaaaggacaaaatggcctacctggtcaaccaggacccagaggagaccctggaccagat
ggattgccatcaggatatggaccagatgggttgcctggaattgtaggtccacctggtcaa
agaggtgactctggcccagatgggcctagaggtcctccaggccccccaggtatgaatgga
gaccaaggtcccaaaggtgccccaggagctccatcaccacaaaattatactgcgaactca
ggggaccctggtccaccaggtaaccctggtctggctggtccaagtggagatcctggcagg
aatggatcaaaagggtggagaggaaaagtgggagcaccaggggatcctggaccaagaggc
tcactaggtgatccagggttggatggattattaacatcaccagggtttaaaggacatccc
ggagctccaggagatgcagggctgagggggcctccagggccaaagggaataaaaggagat
cgaggaataccgggaaaaccagggcgagatggtgatcagggtaaaactggtttcaaagga
gctactggggaaccaaagtacaatggatatgggccacctggaccagcaggccaaaagggt
gaacagggattgactaatactaatttgatgaagggtcaaaaaggacaacctggaattgca
ggaacagagggtttaccaggaatttttggactcaagggagacccaggacctactggacta
aatggtccctcagggtctcaagggccagaagggtcagatggccctccaggtagcaaaggg
caacgcggacctaatggaccacaaggtaatgtgggtctaacaggaaatagaggacttcca
ggtccgaaaggcagccagggcttggatgggattcctggcccacccgggcagaaaggagag
actatcttgatagaagggagtcctgggaagcgtggtgaccctggtcagccaggtcctcct
ggaaatcctggcctccctgggttgtctgttacagggattcatggactaacaggagacaaa
ggaattccaggtccacaaggcatccttggcccaagagggtcacctggaagagaaggcgca
tgtcttcctgggtatagaggagaccctggcgaacctggatatcctgggaggaaaggctac
cctggcccacctggtcctccaggtacagcagtgcctgggttaaaaggagacagaggggac
ccaggtcttccaggaagccagggtaatctaggggaaccaggagatccaggcccacaagga
ccacctggtgcaataggcagacctggaggcccaggggtaagaggtgacccaggtcttcca
ggattcccaggacctgctggtaaaattggagagcctgggtacatccctggccctcctggt
cagccaggggtccaaggtattcctggaccaccagggcgtaaaggtgaggcaacatttaga
aaagtaatacatgaaccaggagctcaaggctctcctggtgcccgtggcacatgcggacct
ccaggaagaactggtccaccaggacctccaggcccaccaggccagcatggtatcaaagga
atgcagggtttcagcccacctggtctgcctggatttacaggctacaaaggagataaagga
agagcagggctgccaggtcccaatggcagacctggaactccaggtcataagggtcctgca
ggtttgcccggcagaaccggtccaagttatgctgacagtttcctgatagtcaggcacagt
cagagcatccacccccctgaatgtcctcatggcactagcttcatctacagtggttactct
ttcctctttatcaatggatataaaagagctcatgggcaggaccttggcaccacgggaagc
tgtctgcctcgtttctctacaatgccttttctgttctgtgacactgaaaatgcctgccgc
tatgcttctcgtaatgactattcatactggttgtccactgaaactcccatgcctatgaac
atggtttccatatcaggagaaatgctgaaatcctacattagcaggtgctcagtgtgtgaa
accacctccaatgtcatagccatccacagtcagaggactctcataccagaatgtcctaga
ggttgggaatcactgtggactgggtactctttcatcatgcaaacaggtgctggagcagag
ggatcctcgcagcccctgatttctcctggctcatgtctggaaaatttccgccaagtgccc
tttatagagtgtcacggcagggggacgtgtaactactatcctgattcctatagctactgg
ctggcctccctcgaccccaacaacatgttcggtaaacccatacctcagacagtgaaggga
cctttcctagaaagcatcatcagccgctgccgagtctgcagaaaaccagggcatcaaggt
gaagggtcaaggtga
DBGET
integrated database retrieval system
