Maylandia zebra (zebra mbuna): 101467977
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Entry
101467977 CDS
T02814
Symbol
rnf180
Name
(RefSeq) E3 ubiquitin-protein ligase RNF180 isoform X1
KO
K15708
E3 ubiquitin-protein ligase RNF180 [EC:
2.3.2.27
]
Organism
mze
Maylandia zebra (zebra mbuna)
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mze04121
]
101467977 (rnf180)
Enzymes [BR:
mze01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101467977 (rnf180)
Ubiquitin system [BR:
mze04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101467977 (rnf180)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF180_C
zf-RING_2
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_5
Tox-GHH
RING_XB3-XBAT31
zf-RING_6
C1_2
Motif
Other DBs
NCBI-GeneID:
101467977
NCBI-ProteinID:
XP_004547250
LinkDB
All DBs
Position
LG12:21748707..21755243
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AA seq
508 aa
AA seq
DB search
MMSSHVGASSVNVSNRVGCSEAEDAGEETSTNETHTPKVERSRQRSVNPAGEGRSSNVLV
RPALSGGKARKKTCSEDNKGSWREQNQDRGEETITAGDLEGRERGKSMERRMAERDETHG
DEAQYRQRRESIGSLSSNNSDHQLNNILELGEGSSNLQRGHTCSRLQSTGCNWTFTSSSN
ALSRRPAAHTRSIPRSPQRPLSRPAAGDLHLYSLSSFREPDPFWVEVRPGSAPGRSLTFY
ELRGEGEDEGDEENVEDGDEGGSGVVRVMSQSVTSAVAQPCVPCERRMSKRERNRIKSLR
RRQRRREKWRQNQQQESRQSSTGNPSSSSSEDDEALTTGDREGYICAVCLDVYFSPYMCH
PCNHIFCEPCLRTLAKNSPTNTPCPLCRTIITHVFFQKELNQTARTFFPKEYLSRKQNFQ
KASCAKWPLPSCRKLFRIFGGFQRQSSPIARRQFPHGEGYPLDTMDFEDDTRGWRFDMDM
VIIYIYSVNWVIGFFIFCFLCYFFFPSF
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgatgagctcccatgtgggagcttctagtgtaaatgtctcgaacagagttggatgtagc
gaagctgaggatgctggtgaggaaaccagtactaatgagactcacacaccaaaagtggag
agatctaggcaaaggagtgtaaatccagcaggcgagggaaggtcaagcaatgtgctggtg
agacctgcgctgtcaggtggaaaagcacgcaaaaagacctgcagtgaggacaacaaagga
agctggagagagcaaaaccaagacaggggcgaggagacaataactgctggagatttggaa
ggcagagaaagagggaaaagtatggaaagaagaatggcggaaagagatgaaacacatgga
gatgaagcacagtatagacagagaagagaaagcattggaagtttgtcaagtaataattct
gatcatcagttaaacaacattttggaacttggagaaggatcgagcaacttgcagagagga
cacacctgctctcgactccagagcactggctgcaactggaccttcacttccagttcaaac
gcactgtcccgtcggcctgctgctcataccaggtccataccccggtcacctcagagacct
ttatccagaccagcagcaggagacttgcacctctactcactaagttcattcagggagcca
gatccattctgggtggaggtgagaccagggtcagcacctgggcgatctttgaccttctat
gagctaagaggggagggagaggatgagggtgatgaagagaacgtggaggatggtgatgaa
ggaggcagcggggtggtaagggtgatgagtcaaagcgtgacctcagcagtggcacaacct
tgtgttccttgtgagaggaggatgagtaaaagggagaggaacaggattaaaagtctgagg
aggagacagcgaagaagggagaaatggagacaaaatcaacagcaagagagcagacagagt
tcaacaggaaacccatccagcagcagcagtgaggacgatgaggccctgactaccggggac
agagagggctacatctgcgctgtctgcttggatgtgtacttcagtccttacatgtgccac
ccgtgcaatcacatcttctgtgagccctgtcttaggacgctggctaagaacagccccact
aataccccctgccccctgtgcagaacaatcatcacacatgttttcttccaaaaagagcta
aaccaaacagcaagaacattctttccaaaggaatacctttcccggaaacagaactttcag
aaagcaagctgtgcaaagtggcctctcccgagctgcagaaaactcttccgcatctttgga
ggcttccagaggcagtcgagtcctattgctagacgccagttcccccacggagaaggctac
cctctggacaccatggatttcgaggatgacactcgtggctggcgatttgacatggacatg
gtcatcatctacatctactcagtgaactgggttattgggttcttcatattctgctttctt
tgctatttcttcttcccctctttttga
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