Maylandia zebra (zebra mbuna): 101468434
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Entry
101468434 CDS
T02814
Symbol
shprh
Name
(RefSeq) E3 ubiquitin-protein ligase SHPRH
KO
K15710
E3 ubiquitin-protein ligase SHPRH [EC:5.6.2.-
2.3.2.27
]
Organism
mze
Maylandia zebra (zebra mbuna)
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mze04121
]
101468434 (shprh)
Enzymes [BR:
mze01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101468434 (shprh)
Ubiquitin system [BR:
mze04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101468434 (shprh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SHPRH_helical-1st
SHPRH_helical-2nd
Linker_histone
Helicase_C
zf-RING_UBOX
zf-C3HC4
PHD
zf-RING_2
TPR_10
zf-C3HC4_2
zf-RING_5
TPR_12
zf-C3HC4_3
SAMD1_WH
TPR_2
Motif
Other DBs
NCBI-GeneID:
101468434
NCBI-ProteinID:
XP_004540177
UniProt:
A0A3P9C5X5
LinkDB
All DBs
Position
LG19:15682054..15697069
Genome browser
AA seq
1661 aa
AA seq
DB search
MSSRRKRAPPVRVDEEAKKRLNWNMLEDRKNEEVQEDEEIPTCSILSADPAPSSNLLSPP
EGATEAACTPVLFTEELPNTSSDITAASTSLALTVFPLLKLSHIWKALIGEFSVRPAWLP
SDCDQRAFTFHRMGEQLCISYSSCDESSGVQCSPDEDTCTAECSLRRIPLEDLDWLQKRR
VVQLCHQAKDDSVKVGICLLETGLGKPEFLSEGNARLKKANQLMQKLMEYFYDFIIPEVV
DNEEEECDTDLERQNVEELYDYVRHMHQEESQKVTYDVQHKALIPVLRPYQSQAVNWMLR
REKYRTNSSKEQSLHFLWRELIALCGKKLFYNPFIGCLIREFPLAGIEWPGGILADEMGL
GKTVEVLALILFHTRQDLEQEALTLPVGKSVNYFVPPPPLERKKVISCKSEAQPKIKISY
PTVRVMLLTAIKEMRSGKGASVNAIFTYIRATYGYDLLKNRNHIRKTLTKLIDDGMVDRV
KGRGLAGSFKLGKKYKETKKTFAGSSKSTSRSTERTPRKMFQRRAKEKAEAALQNSLSDD
QRDPSTPTSDCPVSEEAETKTEWDESLNEKADQPDDMLDSSTAPLQVSQDKSDSDTRDMC
RIADLPEERGEASQLDDDKETETPTRASVVPFNTPDYRFECICGELGIIDYKARVQCMNC
QLWQHADCVNYKEESLETTPFYCPHCLVAMKPVSTGATLIISPSSICHQWVEEINKHIRS
SSLRVLVYQGVKKHGFIQPHMLAEQDVVITTYDVLRSELNYVDIPHSNSKDGRRFRNQKR
YMAIPSPLVAVEWWRICLDEAQMVECPTAKAAEMALRLASVNRWCVSGTPVQRGLEDLYG
LVLFLGVDPYWVKHWWHQLLYRPYRRGNTEPLYHVIAQILWRSAKKDVIDQIQIPPQTEE
VHWLHFSPVEGHFYHRQHEVCSQDALVNLRKISDWSLKLGSLDRRTVNTILCPLLRLRQA
CCHPQAVRGEFLPLQKSTMTMEELLKSLQKKCRVECEEAHRQLVCALNGLAGIHIIRGEF
AEAAEMYREVLRSSEEHKGRLKTDSLQRLHATHNLMELLSAKHRGIPPTLRDDRLDEEAE
QLRQHYMTKYDSEVADARQALQPVLQNIKELKRKVKLNSPWWLDVIQRAVRCSTDDDLVS
RIKNELTSSYKQQAHKLSMADKFRDGYGLQFLLTTQMQDLMKSQKTVQDAVKSLEGPASK
EVIEEATVCHLRPMRLPLNNCVFCKADELFIDYESKLFSHTVKGQTAIFEEMIEDEEGLV
DDRLPTTSRGLWAASETERTLKAILSFAKLKRMDPDLVEEGNTFMELFENWKKEYKVLHE
YWMVLRNHVSAIDELGMATERLRVRLPDEPKPKLPHIIEPHEVEQNRVKLLNDQAVAKSQ
LQKKLGQFLYLTNLEKSQDKSTGGLNPEPCPICARPLGQEWAVLTCGHCFCNECIAIIVE
QYSVGSRRRAIKCAICRQTTSHTEISYVFTTQSSSQDQDIPVKGSHSTKVEAVVRTLKKI
QVTNPGAKCLVFSTWQSVLDIIAKALFDNNMEFSQINGIHKFQENLSSFKYEEKINILLL
PLHTGSNGLNIIEATHVLLVEPILNPAHELQAIGRVHRIGQTKPTFVHRFLIKSTIEERM
QAMLKTAEKSHTSTAMKHSEAAVLTVADLADLFTEDTEPLE
NT seq
4986 nt
NT seq
+upstream
nt +downstream
nt
atgagtagccgaagaaagagggcccctcctgtgagggtggatgaagaagctaagaagagg
ttgaactggaacatgttggaggaccgcaagaatgaggaagtccaggaagatgaagagata
ccgacttgttccattctttcagcggacccagctcctagtagcaacctcctctcccctcca
gagggcgccacagaggctgcctgcacccctgtcctgtttacagaagaacttcccaacacg
tcgtccgacatcaccgctgcttctacctctctggcgctcactgtgtttccacttttgaag
ctcagccacatctggaaagcactcattggggagttcagtgtcaggccagcctggctccca
tctgactgcgatcagagagctttcacgtttcacaggatgggtgagcaactctgcatcagt
tacagcagctgtgatgagagctcaggggtgcagtgcagtcctgatgaagacacttgtacg
gcagaatgcagcctccgtaggatcccattggaggacctcgactggctacagaagaggagg
gtggtgcagctctgtcaccaggcaaaagacgactcagtcaaggtggggatttgcttgctg
gaaactgggctcgggaagccagaattcctcagtgagggaaatgctcggctcaaaaaagca
aaccaactgatgcagaagttaatggagtatttctacgatttcattattcccgaggtcgta
gataatgaggaggaagaatgtgataccgacctggagaggcaaaatgttgaggagctctac
gattatgtcaggcatatgcaccaggaagaaagccagaaggtgacctatgacgttcagcat
aaggctcttattcctgtactcaggccctatcagagtcaagcagtcaactggatgctgaga
agagagaaatacaggaccaactcaagtaaagaacaatcattgcatttcctctggcgggag
ttgatcgctttgtgcggcaaaaagctcttttacaacccttttatcggctgcttaattcga
gaatttccactagctggcattgagtggcctggtgggatcctggctgatgagatggggctt
ggaaagacggtggaagttctggctctaatcttgtttcatacccggcaggacctcgaacaa
gaggccctcacactccctgtgggaaaatctgtgaattactttgttcctcctcctccgcta
gaaagaaagaaagttatcagctgcaagtctgaagctcagcctaaaattaaaatatcctac
ccaactgtgcgtgtcatgctactcactgctataaaggagatgagatctggcaagggagcc
tcagtcaatgccatcttcacctacatccgagccacttatggctatgacctcctcaagaac
cgcaaccacatcaggaagacgctgacaaagctcatagatgacggcatggttgaccgggtc
aaaggtcggggcttggcggggtcgttcaagctgggaaagaagtacaaagaaacaaagaaa
acatttgcaggatcatcaaagtctacttcgagaagcacggagcgcacgcccaggaaaatg
tttcagagacgagcaaaagaaaaggcagaggcagctctacaaaactctctctcagacgat
cagagagatccgagcacccctacatctgactgccctgtctcagaggaagcagaaacaaag
acagagtgggatgaaagtctgaatgagaaagcagatcagccagatgacatgctggattct
tccacggcaccattacaggtttctcaggataaaagtgactcagatacacgagacatgtgc
agaatagctgatctccccgaagaaagaggagaagcttcacagctcgatgatgacaaggag
acggaaacccccaccagagcgtctgtcgtcccgtttaacacccctgactacagattcgag
tgcatctgtggtgaactcggcatcattgactacaaggcccgcgtccagtgtatgaactgt
cagctgtggcagcacgcagactgtgtgaactataaagaagagagccttgaaactacacct
ttctactgccctcactgcctggtagccatgaaacccgtgtccacaggagccaccctcata
atttccccgagctccatctgccaccagtgggtcgaggagatcaacaagcatatcaggtcc
tcctccttacgagtgctggtttatcagggtgtgaagaaacatggattcattcagcctcac
atgctcgccgagcaggacgtggtcattaccacctacgacgtgctgcgctctgagctcaac
tacgttgacattccccacagtaacagcaaagacggccgccgcttccgcaaccagaagcgt
tacatggctatacccagtcctctggtagctgtggagtggtggcgaatctgtctggatgag
gctcagatggtggaatgccccactgcgaaggctgcggagatggctctacgtcttgcgtct
gttaaccgctggtgtgtcagcggcactccagtccagagaggcttagaagatctgtatggc
cttgtgcttttcctgggagttgacccatactgggtgaagcactggtggcaccagcttctt
tatcgtccctatcgacgtggaaatacggaacctctgtaccatgtgatcgctcagatatta
tggcgatcggctaaaaaagacgtcattgatcagattcagatcccgcctcagacagaggaa
gtgcactggttgcacttctcgcccgtcgagggtcacttctaccaccgtcagcacgaggtc
tgctcccaagacgctttggttaacctcaggaagatctcagactggagcctgaaactcggc
agcctcgaccgccgtaccgtcaataccatcctgtgcccgctgctcaggctgcgccaagcc
tgctgccatccacaggctgtcaggggggagttcctgcctctgcagaaaagcaccatgaca
atggaggagctcctgaagtccctgcagaagaaatgtcgagtggagtgtgaagaagctcac
agacaattggtgtgcgcactcaatggtttggctggaatccacatcatcagaggtgagttt
gcagaggcagcagagatgtatagagaagtgctccgttcatcagaagagcacaaaggcaga
ctgaagactgattcgttacagaggcttcatgctacccataacttgatggagctgctaagc
gctaagcatcgtgggattcctcctaccctcagagatgacagactagatgaagaggccgag
cagctgcgacagcactacatgaccaaatacgactctgaggttgcggatgctcggcaggct
ttgcagccggtgctgcagaacataaaagagctgaagcgaaaagtcaagctgaactctccc
tggtggctggatgttattcagagggcagttcgctgctccactgatgacgacctggtgtcc
cgcatcaagaatgagctgacgtccagctacaaacaacaagcccacaagctctccatggca
gacaagttccgtgatggctatggtctgcagtttctgctcaccacacaaatgcaggacctg
atgaaatctcaaaagaccgtgcaagatgcagtgaaaagtcttgagggtccggcctcgaaa
gaagttatagaggaggccacagtttgtcatctcaggccaatgcgactgccactcaacaac
tgtgttttttgcaaagcggatgaacttttcatagattacgagtccaagctgttttctcac
accgtcaaaggtcagacagccatctttgaagaaatgatcgaggatgaagaggggctggtc
gacgaccgtctccctaccactagccgaggtctgtgggcagccagtgagacagaacgcact
ttgaaggccatcttgtcttttgccaaacttaaacgcatggacccagacctggtggaggaa
ggaaacacttttatggaactgtttgagaattggaagaaggagtacaaggtgctgcacgag
tactggatggtgctgcgtaatcatgtgtcagccatcgatgagctgggtatggccaccgag
aggctacgtgtgcgtctgcctgatgaaccaaagcccaaactgccgcacatcatagagccc
cacgaggtggagcagaacagagtcaaacttctgaacgaccaagctgtggcaaaatctcag
ctccaaaagaagctcggccagtttttgtatctcacaaatctggaaaagtcgcaggacaag
tctactggaggtctgaacccagagccgtgtcccatttgtgctcggcccctgggacaggag
tgggccgtgctgacgtgtggacactgcttctgtaacgagtgtattgctatcattgtggaa
cagtacagcgtgggctcaaggcggcgtgccatcaagtgtgccatttgtaggcagactaca
tcccacacagaaatctcttacgtgttcaccacccaatcatccagtcaggaccaagacata
ccagtcaagggaagtcactctaccaaagtggaggcagttgtgagaactctgaagaagatt
caagtgaccaaccccggggccaaatgtctcgtcttctccacgtggcagagtgtcctggac
atcatcgccaaggccttgtttgacaataacatggagttttctcaaatcaacgggattcac
aaatttcaggagaatctaagttccttcaagtacgaagagaagatcaacattcttcttcta
cctctccacacgggctccaatgggctgaatatcatcgaagcaacacatgtgctgctggtt
gaaccaatcctcaaccctgctcatgagctccaggcaataggcagagtgcaccggattggc
caaaccaagccaacatttgttcacagattcctcatcaaatctacaattgaagagagaatg
caagcaatgctgaagacggcagaaaaaagtcacaccagcacagccatgaagcactcggag
gctgcggtactgacagtcgctgacttggctgatctgttcactgaagacactgaacctctg
gagtga
DBGET
integrated database retrieval system
