Maylandia zebra (zebra mbuna): 101468765
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Entry
101468765 CDS
T02814
Name
(RefSeq) pre-mRNA-processing factor 39 isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
mze
Maylandia zebra (zebra mbuna)
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mze03041
]
101468765
Spliceosome [BR:
mze03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
101468765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
HAT_Syf1_CNRKL1_N
TPR_19
HAT_Syf1_CNRKL1_C
TPR_16
TPR_12
TPR_11
TPR_MalT
HrpB1_HrpK
TPR_21
GAT
Motif
Other DBs
NCBI-GeneID:
101468765
NCBI-ProteinID:
XP_014268074
LinkDB
All DBs
Position
LG2:complement(27418484..27429482)
Genome browser
AA seq
727 aa
AA seq
DB search
MAAAEGCEEMSGNGELVESSAMEAPEVPAPPLPEMTEENGSAAVVPEAPVGPDPASFSMQ
PAAVDEEGELPADFERLWKAAHDNPQDFTSWTDLLQYCEQEGHVTSSRRALEAFLVRYPL
CYGYWKKFADLERRVGLNDKAEEVCIQGLQAIPLSVDLWIHYINLLLGTLDMNLPESPKR
IRSVFEDAVAAAGLDFHSDRLWDLYVEWEKEQGNMKNATAVLDRVLRVPTQLYNTHYDKF
KEHLNNHEPKEVLSPEEYEELRELCRQSQKAERAEQSQEEEKERPPGEEEPATPEGTDTE
ELMQKIREQVLLRRDKVYQDNEGEVRKRWHFEDAIKRPYFHVKPLDRLQLRTWHSYLDWE
ITELNKDTKDPSQGDYTDPNQAITEESEVMAPPQEPLEDTIAAQDDHRVRILFERCLIAC
ALYEEFWSRYIQYLEPQSVDEARAVYKRACEIHLAYKPNIHMHWATFEERHGDLTEARRV
LEALEKKLPGLAVVRIRRAALERRAGQLDQSEALLREAVAESKEKPTLHAFYSIKLARLL
LKLGRDPSSARSVLQEALEISPDNDKLHMNLLELEVSGDPWASASAVQECVTRALAAPLE
PHTKILFSQRGLQFAEDYSNSIQSVLSVYEEHQKLLKELGGTKREAENGDEDPEKLSKTD
DGSAVSAQVPPTMPHVPITTPPPPVMGADMSAQTGYGGYSSWYQQPQYGSYGYQNTWNYN
QGYYPPS
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggagggctgtgaggagatgagcggcaacggggagctggtagagtcttca
gccatggaagctcctgaggttccggcgccacctctacctgaaatgacggaagagaacggc
agtgccgccgtggttcctgaggctcctgttggccccgaccctgcttccttctccatgcaa
ccagccgcagtggatgaagaaggggagctacctgcagactttgagcgtctgtggaaggcc
gctcatgacaatcctcaagacttcacctcctggactgacctactgcagtactgtgagcag
gagggtcacgtcacatcttcacgtagagcactagaagccttccttgttcgctatccactc
tgctatggttactggaagaaatttgctgatctggagcgccgcgttgggcttaacgacaaa
gcagaggaggtgtgcattcagggtcttcaggcaatccctctcagtgtagatctgtggatc
cactacatcaatctgctgctaggaacactagacatgaaccttcctgagtcacccaagcgg
attcgcagtgtgtttgaggatgctgtcgcggcagccggtttggacttccactcggaccgg
ctttgggatctgtatgttgagtgggagaaggagcagggcaacatgaagaacgcaacagcc
gtcctggacagagtcctcagagtccccacacagctctacaacacccactacgacaagttt
aaagagcatctgaacaaccatgaacctaaagaggtgctttctccagaggagtacgaggag
ctgagggagctgtgccgtcagagccagaaagcggaacgagccgaacaatcgcaggaggag
gagaaggagaggccgccgggtgaggaagagcccgccacacccgagggcacagacacagag
gaattgatgcagaagattagggagcaggtgttactacgcagggacaaagtgtatcaggac
aacgagggagaagtccggaagagatggcactttgaagatgccatcaagcgaccgtacttc
cacgttaagccacttgatcgcctccagctccgcacttggcactcatacctcgactgggag
atcacagagctgaacaaggacacgaaagaccccagccaaggtgactacacagatccaaac
caggccatcacagaggagtcggaggtcatggcccctccacaggaaccattggaggacact
atagctgctcaagatgaccacagagttcgcatcctctttgaacgttgcctgatcgcctgc
gcactctatgaggaattctggtccaggtacatccagtacctggagccgcagagcgtggac
gaggcccgggcggtttataaacgagcctgtgaaatccacctggcgtacaaacccaacatc
cacatgcactgggcgacctttgaggagaggcacggtgacttaactgaagctcggcgagtg
ttggaggccctggagaagaaactgccaggtttggcggtcgtccgtatccgcagggctgct
ttggagagacgagccggccagctggatcagtcggaagccttgctaagggaggcggtggct
gaatccaaagagaagcccacgttacacgctttctattcaatcaagctggctcgattgctg
ctaaaactgggcagggaccccagcagtgcccgcagtgttttacaggaagcgctggaaatt
agtccggataatgataaactgcacatgaacctgttggagctggaggtttcaggtgacccc
tgggcctcagcctcagcggtgcaggagtgtgtgacacgagctctggcagctcctctcgaa
cctcacaccaagatcctcttctcacagaggggcctacagttcgcagaggactacagcaac
tctatccagagtgtgctgtctgtttacgaggagcaccagaagctgctgaaggagctcggt
ggaacaaagagagaagccgagaacggggatgaagatccagagaagctgagcaaaactgat
gacggctctgctgtgtctgcacaagtcccacctaccatgccgcacgtccccatcaccacg
ccgcctcctcctgtgatgggcgccgatatgagcgcacagactggctacggaggatacagc
agctggtaccagcaaccacaatacggcagctacggctaccagaacacctggaactacaac
cagggctactatccacccagctag
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