KEGG   Maylandia zebra (zebra mbuna): 101468795
Entry
101468795         CDS       T02814                                 
Symbol
thoc3
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
mze  Maylandia zebra (zebra mbuna)
Pathway
mze03013  Nucleocytoplasmic transport
mze03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mze00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101468795 (thoc3)
  09122 Translation
   03013 Nucleocytoplasmic transport
    101468795 (thoc3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mze03019]
    101468795 (thoc3)
   03041 Spliceosome [BR:mze03041]
    101468795 (thoc3)
Messenger RNA biogenesis [BR:mze03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     101468795 (thoc3)
Spliceosome [BR:mze03041]
 Complex C
  Other components
   EJC/TREX
    101468795 (thoc3)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    101468795 (thoc3)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40_CDC20-Fz WD40 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_EML_2 WD40_WDHD1_1st WDR55 ANAPC4_WD40 Beta-prop_Aladin Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 WD40_Gbeta Beta-prop_WDR19_1st Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_Vps41 Beta-prop_EML Beta-prop_IFT140_1st eIF2A Beta-prop_WDR36-Utp21_1st DSE1_N WD40_RFWD3 RMC1_N Beta-prop_NOL10_N Beta-prop_WDR35_TULP_N Beta-prop_TEP1_C WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_HPS5 Tricorn_2nd WDR90_beta-prop_4th TRM82_WD PD40 PAC11 B-prop_COPA_B_2nd Beta-prop_ACSF4 Beta-prop_WDR75_1st Beta-prop_SPT8 ASA1 Beta-prop_EIPR1 Beta-prop_WDR41 Peptidase_S9_N Beta-prop_Nup120_160 Beta-prop_NWD2_C WD_LRWD1 Cytochrom_D1 Beta-prop_SCAP Beta-prop_WDR11_1st TP_0598_N PROPPIN DPPIV_N Beta-prop_ELP1_1st Beta-prop_DCAF4 YNCE
Other DBs
NCBI-GeneID: 101468795
NCBI-ProteinID: XP_004552112
UniProt: A0A3P9CY15
LinkDB
Position
LG2:23056428..23060007
AA seq 322 aa
MASQYFQEMQESFKNNNKSREFAAHTAKVHSVAWSCDGRRLASGSFDKTASVFVLEKDRL
VKENNYRGHSDSVDQLCWHPTNPDLFVTASGDKTIRIWDVRTTKCIATVNTKGENINICW
SPDGQTIAVGNKDDVVTFIDAKTHRSKAEEQFKFEVNEISWNNDNDMFFLTNGNGCINIL
SYPELKPIQSINAHPSNCICIKFDPTGKYFATGSADALVSLWDVEELVCVRCFSRLDWPV
RTLSFSHDGKMLASASEDHFIDIAEVETGEKLWEVQCDSPTFTVAWHPKRPLLAYACDDK
EGKYDNNREAGTVKLFGLPNDS
NT seq 969 nt   +upstreamnt  +downstreamnt
atggcgtcgcagtatttccaagagatgcaggagagctttaaaaataacaacaaaagccgc
gaattcgccgctcatacggctaaagttcactcggtggcgtggagctgtgatggcaggagg
ctggcctccgggtcctttgataaaacagcgagcgtcttcgtgctggaaaaggaccgtttg
gtgaaagagaacaactacagaggtcacagtgacagcgtggatcagctctgctggcatccc
accaacccggatctgtttgtcacggcgtccggagacaaaaccatccgcatctgggatgta
cgcaccaccaaatgcatcgccactgtcaacacgaagggtgaaaacatcaacatctgctgg
agcccggatggtcaaaccattgccgtggggaacaaagatgacgtggtgactttcatcgat
gccaagacgcaccgctccaaggcagaagagcagttcaagtttgaggtgaatgagatctcg
tggaacaacgacaacgacatgttcttcctcaccaacggaaacggctgcatcaatattctg
agttatccagagttgaagcccatccagtctatcaatgcccacccgtccaactgcatctgc
atcaagtttgaccccacagggaagtactttgccacaggaagtgctgatgcgttggtcagc
ctgtgggacgtggaggagctggtgtgtgtccgctgcttctccagactggactggccagtg
aggactctgagcttcagccacgatggcaagatgctagcctcggcctccgaggatcacttc
atagacatcgctgaggtggaaacgggagagaagctttgggaagttcagtgtgactctcca
accttcacagtcgcctggcacccaaagaggcccctgctggcctacgcctgcgatgacaag
gagggcaagtacgacaacaaccgggaggcgggcaccgtcaaactgtttggcctccccaac
gactcctga

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