Maylandia zebra (zebra mbuna): 101468849
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Entry
101468849 CDS
T02814
Symbol
thoc5
Name
(RefSeq) THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101468849 (thoc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mze03019
]
101468849 (thoc5)
03041 Spliceosome [BR:
mze03041
]
101468849 (thoc5)
Messenger RNA biogenesis [BR:
mze03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
101468849 (thoc5)
Spliceosome [BR:
mze03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
101468849 (thoc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
101468849
NCBI-ProteinID:
XP_004544556
UniProt:
A0A3P9CJJ3
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All DBs
Position
LG12:17162291..17170357
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AA seq
684 aa
AA seq
DB search
MSSDALKKRKSKVLRNEGGTPEMKRGRADADQQDVRVYHEEVELDGRDPQQDYIQYKETC
QSLANLMSEIQELKANGAKDGCAEVEKKRMQSCIHFMNLKKLNRLAHMRLKKGRDQTHEA
KQKVDVLHLQLQNLLYEVMHLQKEISKCLEFKSKHEEIDLVSEEEFYQEAPPEISRPQLT
KNDPHQLTLARLDWELEQRKRLAEKYKESLASKETIQKSIEVKKEHLRSLQPGLNAIMQA
SLPVQEFLSMPFEQTQKQTEIARHLPPPLYVLFVQANAYGQACDKNLIVSISGDVDEAKA
LSKPPEDSQDDESDSDAEEEQEKTKRRRPTAGGQLDDKRREMLKRHPLSLGIDLKCKDGS
VLHLYFYYLMNLNIMTVKTKVSTSTDLNTAISAGELLKSDTLLSCLYTSDQGRETPNPAN
RYQFDKVGIISFGDYVEELGHPYMWVQNLGGLHFPSDASEGVRVGSSLSASHMENTMKLL
RGRVQSRLALHRQFASLEHSIIPISSECQHLFPAKILSRLARWTTITYQEYLEFPYTRHV
TEAGLAKETDLYFMGVVERGTARLNAAVVLSPRYPEISPVFSLSLSWKGERSGRTDDNLR
AMESEVNVFKNELQGPRPGHQLLTNQFARLCVCLDVYLETEGQDDSVEGPREFPREKMCL
RTVRGPNRLKPFKYNHPQGFFSHR
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcggacgccctgaaaaaacgaaagtccaaggttctccgcaacgaaggaggaacc
ccggagatgaagcggggtcgagcagatgcggaccaacaggatgtgcgtgtgtatcatgag
gaggtggagcttgatggcagggaccctcagcaggactacatccaatacaaagaaacatgt
cagagtctggctaatctcatgagtgagatccaagagcttaaggccaacggagctaaggac
gggtgtgcagaggttgagaagaaacgtatgcagagctgcatccacttcatgaatctgaaa
aagctcaatcgacttgctcatatgcgtctaaagaaaggcagagaccagacacacgaggca
aaacagaaagtcgatgtgctgcaccttcagctgcaaaatctgctgtatgaagtcatgcat
cttcagaaggagatcagcaagtgtctggagttcaagtctaagcatgaagaaattgacttg
gtgagtgaagaagagttttaccaggaggcaccgccggaaatttccaggcctcaactcaca
aaaaatgacccccaccaactcacactggcgcgactggactgggagcttgaacaacggaag
aggttggcagagaaatacaaggaatcactagcgtcaaaggagacaattcagaagagcatt
gaggtgaagaaggagcatctgagaagcttgcagccaggtcttaatgccatcatgcaggcc
tccctcccagtccaggagttcctgtctatgccttttgaacagactcagaagcagacggag
attgcccgccatctgcctccacctctctatgtcctgtttgttcaagcaaatgcttatggc
caggcgtgtgacaagaacctgattgtctcaattagtggtgatgtagatgaggccaaagcc
ctgtccaaacctccagaagattcccaggatgatgagagtgattctgatgcagaggaggag
caagagaaaactaagagaagaaggccaactgcaggtggccagctggatgataaaagacga
gagatgctgaagaggcaccctctgtccctaggcatagacttgaagtgtaaagatggcagt
gtactccatctttacttctactacctgatgaatctgaacattatgactgtcaagaccaaa
gtgtccacctccaccgatctcaacacggccatcagcgcaggggagctcctgaagtcagac
actctcctcagctgtctctacaccagcgaccagggacgagaaacacccaatccagctaat
cgctaccagtttgataaagtcgggatcatttcctttggcgattatgtggaggagctgggc
catccctacatgtgggttcagaatctcggaggacttcattttcctagtgacgcttcggag
ggtgtgcgcgtgggtagttcactgagtgcgagccacatggagaacaccatgaagctgctg
aggggacgagtccagtcccgcttggctttgcacagacagtttgcctctttagaacacagc
atcatccccatctccagcgagtgtcagcacctttttcctgccaagatcctttcccgtttg
gcacgttggaccacaatcacttaccaggagtacttggaatttccatatacacgtcatgtg
actgaagctgggctggcaaaggagactgatctgtactttatgggagtggttgaaagaggc
acagctcgtcttaatgctgcagtggtgctgagtcccagatacccagagatatctcctgtc
ttctccctctctctgagctggaagggagagcgcagcggacgcaccgacgacaacctccga
gccatggagagcgaagttaacgtgttcaaaaacgaactacaaggaccacgtcctgggcac
cagctcctgaccaatcagtttgcacgactgtgcgtctgcctggatgtttatttggagaca
gaaggacaagacgacagcgtggaaggaccgcgagagttcccccgtgagaagatgtgccta
cgcactgtcaggggtcctaatcgtctgaagccgttcaagtataaccatcctcagggtttc
ttcagtcatcgctaa
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