Maylandia zebra (zebra mbuna): 101468963
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Entry
101468963 CDS
T02814
Name
(RefSeq) probable ribonuclease ZC3H12C
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
mze
Maylandia zebra (zebra mbuna)
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mze03019
]
101468963
Messenger RNA biogenesis [BR:
mze03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
101468963
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
UBA_N4BP1_C
Omega-toxin
Motif
Other DBs
NCBI-GeneID:
101468963
NCBI-ProteinID:
XP_004573083
UniProt:
A0A3P9CTE1
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All DBs
Position
LG16:3789604..3816147
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AA seq
904 aa
AA seq
DB search
MGLKDHLEDGTGHILSPGLDLDYLHVEGAERQAGNLGAGVTVKSSNTAGSRGISSIIHSS
SSSSCSNFSEESAISDSEDERLQTGSGSDSKTPHHDQLHLHQREESSVFQPVRLDLAPNT
SPGDPPETSLTDPITHCRTKVEFALKLGYPEELVLLVLRKLGPDALINDILGELVKLGTK
IEMDQQGGQAVSQSPSSSLSSTSNSSLDSSRLLCRSHLLEDKENLRPVVVDGSNVAMSHG
NKEVFSCQGIKLAVDWFLERGHRDITVFVPAWRKEQSRPDALITDQEILRRLEKEKILVF
TPSRRVQGRRVVCYDDRFIVKLAYESDGIIVSNDNYRDLANEKPEWKKFIDERLLMYSFV
NDKFMPPDDPLGRHGPSLENFLRKRPVIPEHRKQPCPYGKKCTYGHKCKFYHPERGSQPQ
RAVADELRASAKISSVASRGLLEHALMAKSQKNGQSEGMAEAPLIRDTGKKQPNRSLQSS
FSELSEDKTQVSSKVEEQRRNSSLSGSCSNNIVAHPAPGGPPSSGHLERWEHPAGSTGCS
SGIAGASGPNKAESYYRCSSPVVGYNSVVKAYSGLSLIVPQTPECFFPGELGTSSLASDC
SSESSVSSDSFSPDPVLDDSPKCHHHHPHHHHHHHHYSGQYPHQASRVSPSLSQHSPRGY
VHPQGLWRQRDFGIEDTPASVASRISPHHVNTASDYIQPQQQLQLLANFPGEPPHPQHPP
QTPTTHARSQSFPRGHNMVGSLWPEHGLQDRVCEGSSVHSRRNYSVRTQQPQHQQNWDPN
YEPPPKPYYDLFSYKSFPQVHGHSPWGQQVHSSPHGLLIPGLPSLSQQSLPSVPTHKSHM
PSATQHAKPTALGRYQDLRERVFVNLCGIFPPDLVRMVMTRNPHVTDAQELAAAILMEKS
QHSS
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atgggcctgaaggaccatctggaggatgggacaggccacatcctcagcccagggctggat
ctggactacctacacgtggaaggtgctgaacggcaggctgggaatttaggagcgggtgtc
actgttaaaagcagcaatactgctggtagcagaggcattagctctatcattcattcaagc
agcagtagcagttgcagtaacttttctgaagagagtgctatctctgacagtgaagatgaa
aggctccagaccgggtctggttctgactctaaaacaccgcaccacgatcagcttcaccta
caccaaagggaggagtcctcagtctttcagccagtcaggctggacctggcaccaaataca
tctcctggagaccccccggaaacatctctaactgaccccatcacacactgccgtacgaag
gtggagttcgctctcaaactaggctaccccgaagagctagtgttgctggtcctgaggaaa
ctaggccctgacgcacttatcaatgatatactgggagagctggttaaactgggaaccaaa
atagagatggatcagcaaggaggtcaagctgtctcacagtctccctcgtcctctttgtcc
tccacctccaactcctctctggattcttctcggctactgtgccggtcccacctgctagaa
gacaaagaaaacctgcgacctgttgttgtggatggaagcaatgtagccatgagtcatggg
aacaaggaagttttttcctgccaaggtatcaagctagcagttgattggttcttggagcga
ggccaccgtgacatcacagtgtttgtccctgcttggagaaaggagcagtcgcgacctgat
gctcttatcacagaccaagagatcctgcggcgtctggagaaagaaaagatcttggttttc
actccatcacgacgcgttcagggacgtcgtgtggtttgctacgatgacagattcatcgtc
aaactggcctacgagtcagatggtataattgtttcaaacgacaactaccgtgacttagca
aatgagaagccagagtggaagaaatttatagatgagcgcctgctgatgtactcgtttgta
aatgacaaattcatgccacctgatgacccgctgggacgccatggacctagtcttgagaat
ttcttgagaaagaggcctgttattcctgaacatagaaagcagccatgtccttatggaaaa
aagtgcacatatggccacaagtgcaagttttatcaccctgaaaggggtagtcagccccag
cgagctgtggcagatgaactccgtgccagtgccaaaatttcatcagtagcttcaagaggc
ctgctggaacatgccctgatggcgaagagccaaaaaaatggtcaatcagaaggaatggct
gaggccccgctgattcgggataccggaaagaaacagccaaatcggagccttcagagctcc
ttcagtgagctctcagaggacaaaactcaggtcagttccaaagtggaggaacagaggaga
aacagcagtcttagtggcagctgtagcaataacattgtagcacatcctgctccaggggga
ccgccttcatcgggacatctggaaagatgggaacaccctgctggaagtactggatgcagc
tccggtattgccggggcttcaggaccaaacaaagctgaatcttattacagatgcagttct
ccagtggtgggctacaactctgtggtaaaggcttattcgggactcagtcttatagtgcca
cagactcctgaatgcttctttccaggtgagctcggcacaagttcactggcttcagattgt
agcagtgaaagcagtgtcagctcagattctttctctcctgaccccgtgttagatgatagc
cccaagtgccatcaccatcatccccaccaccaccaccatcatcatcactactctggccag
taccctcaccaggcaagccgtgtttctcctagtctgagccagcattctcctcgtggctat
gtccatcctcaaggactttggagacaacgtgattttggcatagaagatactccagcatct
gtcgcctctcgcatttcgccacatcacgtcaacaccgcttctgactacatccaaccccag
caacagcttcagctgctcgccaattttccaggggaaccacctcatccacaacatccaccc
caaacacccactactcatgcccggtctcagagcttccctcgaggccacaatatggtgggc
tccctttggccggaacatgggcttcaggacagagtgtgtgaaggctcatcagttcattct
agaagaaactactctgtgcgaacccaacaacctcagcaccagcagaactgggaccctaat
tatgagccaccccctaagccttactatgatctgttttcctataagagttttccacaagtc
catggacactctccttggggccagcaagttcattcatcaccacatggccttttaatacca
ggtcttccatcgctttcacagcagtctcttccatctgtccctacccacaagagccacatg
ccctcagcaacccagcacgcaaagccaactgccttgggtcgataccaggaccttagggag
agggtgtttgttaacttgtgcggcatcttccctccagatttggtgaggatggtaatgacc
aggaacccacatgtgacggatgctcaggagcttgcagctgccattttaatggagaagtca
cagcacagctcttga
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