KEGG   Maylandia zebra (zebra mbuna): 101468968
Entry
101468968         CDS       T02814                                 
Symbol
mdc1
Name
(RefSeq) mediator of DNA damage checkpoint protein 1 isoform X1
  KO
K20780  mediator of DNA damage checkpoint protein 1
Organism
mze  Maylandia zebra (zebra mbuna)
Brite
KEGG Orthology (KO) [BR:mze00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mze03400]
    101468968 (mdc1)
DNA repair and recombination proteins [BR:mze03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    101468968 (mdc1)
SSDB
Motif
Pfam: BRCT_2 RTT107_BRCT_5 FHA BRCT
Other DBs
NCBI-GeneID: 101468968
NCBI-ProteinID: XP_004550910
LinkDB
Position
LG11:19626372..19638468
AA seq 2077 aa
MACEGMDATQMISDSILESDEEDNEEEIENKRGRPLAKLCILKNKHIPEAEFPLFLGDNV
LGRDPNSCTVPLPASSVSKQHATICLCVYRRRACRSEVDMEALVWDLGSMNGTRKGRLKL
TPNVRYALSEGDSLVVADIPCQFVICGVDSSQGDASSPLRQNSGVKTKLPDASGEKGDDT
STDSKKCVNGGTETPVRASCLTFEQTPHQPQGTLVPESDSDSDSETGVRGERRRRTLVSD
SDSHKSSPISSSFLSPPNKVVPESDNESPMTVSSSSKNKPNRHDSFTTQETDVDAARQQL
EEKKVVALVEDSEEEEERAVQAGTKSLKGGWHMPVEKESNASFTGDGELSTPAVSTDAIP
AFNMDSDTDVEGEDEEVASAGPVTLNTNQQVDQPPKTAQFHMDSDTDIDEDDDASGKAPK
ALPSSDENAKTPHAVSVIPPEGVTMDSDTDVDDDGVVSDAATKAGPTVCQSAHTADSAFS
VQAEDFHLHSDTDVDEDEAKNTTDETPNKSDIKLTALKSAPVAPDNLQVESDTDDEALPV
PATSKPSVVAAVADSRPTAVADADLEILSDSDTDVEDASLLAIPVGVTTLSASPGPTLKA
SLADSDADTDVDESSVPPVGDEAKPADVRVDGDTEDKKSDIGEEGEDQVPRLHRETTPGL
LAPLLQNCSTPVQMSDEEVEDMATQAFVSPSSGSLRRAAVPAVRPVVLSSCSDIQEEEDF
AVAETQSFTFQSRDRVSSEEPTQAFVLESSCDNKNDQSTKEESFQLGLSDSSHLQCPDQA
LAMENTQAFVSVERGVNLEDTQAYAAMSAADRSSAENDANLEATQDYVEDKETERYQVDV
ALEATQVYVAEPYSHAEDDADDDACETQPSDFTASSTLAIAETQPMLPIAGEEDLAAENP
VCSVQQIQPRSLKEDGPKAAQPQEKGLSDAQSVTETQPVCTSDSEASDDEGSFPAQRNRT
AKPLPLEEAQTQDLTCSELSVSETQPMHGGIAETQPMATCDDDDEDSMPGPRKRKAKQLH
LEEEETQPVADSELSTAETQPVATCDDDDEDSMPGPRKRKAKQLQPEEEMQTLASSEVSA
LETQPLSTNEGQQSDEEDVIACTRKRKAKPLQLEEEQTQPLTSADVETPAVVTGKCDDKD
SIPGPRKRKAKQMKLEEKTQPVDNSKMTHVETRPLTTKTGLSPSEESEAGTSGACVPNLR
VTRAKPREEEDQVACPGPSKRQTRGRSGKPLSDGDNNKEMVKRARGRKITKQQKHDGEEE
DETPVRERNKQAVNKSLIKQQDGKDREEEDGADLRQEREENDNERRTTDERKKHQDEIEM
QLMEEKLETEGRVNKEQERLQAEDAARAEREIKEKEEQQKIESERIEREERERLEREEKE
RLERERKEQEKETAKREQEERLEREQQLQARLEREEREMEERERVEKEKEAQEKQLKELE
EKKEEQDKSKTPSRGRRTTRRTIASQSTAEPDQDSTVSTNDDFPARRTRSRSNSSNSVSS
ERSASSVHAQESKGRGRGRGRGTRETSETPQKPVARSSNRRTTVAAGAVEHEPDSSNSLA
PEVSSCSVSSHNRGRGGRQRGRARKTEHDPDSIPSVSQSQSDQNLSPARGRKGKKAEESS
NEALHKNGKEDSQPATTTRGRQQPSAATDEEDQSKQEEACTSEESLPKRNVRGRGQRAVK
SETVEKPVAPAVSDDDEAKDKRKATRDLEANTGADLSCSKRKERSSKTAETDEEEGKGKT
NDEIPVSLQGKKRGRASTAQAKKSAKECLSEVKEEEREKMEGETVEKKVRGRQSAVSRKK
KEELEESGTSLTATNQDANLEASEPQTPTSNASRKRQAPANFSPVAKSPRSSSASPAASG
RLQTEGQAYKVLFTGVMDEAGEKVLARLGGSLAKGVGDMNCLVTDKVRRTVKFLCALAKG
IPIVTTDWLEKSGKAGSFLSPSSFIVKDPEQEKKFNFSLHESLRIASSQPLLKGYEVHVT
RSVKPEPVHMKDIISSSGATFLPKMPSSNKPHTVVVSCEEDWSLCRPALSASLPVVTAEF
ILTGILQQKLDFQSHTLSPSTANVQPAGGRGRGRRKT
NT seq 6234 nt   +upstreamnt  +downstreamnt
atggcgtgcgaaggaatggatgctactcagatgatcagtgactcaatcttggagtcagat
gaggaagataatgaagaggagatcgaaaataagaggggacgaccgttggctaaactgtgc
atcttgaaaaataaacacatacctgaggcagagtttcccctctttttgggtgataatgtg
cttggccgtgaccccaactcctgcactgtgcccttgccggcatcctcagtgtccaaacag
catgctactatctgcctttgtgtgtaccggagacgtgcctgtcgcagtgaagtggacatg
gaagctttggtttgggacttagggagcatgaatgggacccgcaagggccgcttaaagctg
actcctaatgtacgctatgccctcagtgaaggtgacagtttggtggtggcggacatcccg
tgtcagtttgtcatttgtggcgtagactcttctcagggggacgcaagctctcctctgaga
caaaattcaggggtaaagaccaagttgccagatgcctcgggagaaaagggagatgacaca
agcacagacagcaagaaatgtgtcaatggagggacagagactcctgtcagagccagctgc
ctgacctttgagcaaactccccatcagccacaggggaccttggtcccagaatctgactca
gactcagacagcgaaacaggagtaagaggagaaagaagacgaaggactctagtgtctgat
tctgactcccataaatccagccccatcagctcgtcattcttgagtcccccaaacaaagtt
gtccctgaaagtgacaatgaaagccccatgacagtctcgtcttcctctaaaaataaacca
aacagacatgacagcttcaccacacaggagacagatgtagatgcggcgcgacagcagttg
gaggaaaaaaaagtggttgcacttgtggaggacagtgaagaggaggaagaaagagcagtg
caagcggggacaaagtctctgaaagggggttggcatatgccagtggaaaaggaaagcaat
gccagttttacaggagacggtgaattgtcaacaccagcagtctctacagacgcaatccct
gcatttaacatggacagtgacactgatgtggagggagaggacgaagaagtggcatcagcg
gggcctgtgaccttgaatacaaaccaacaagttgatcaacctccaaagacggcccagttt
cacatggacagtgacacagatatcgatgaggatgatgatgcttcaggtaaagctcccaaa
gctctgccttcttctgatgagaacgccaaaactcctcatgctgtttcagttattccacct
gaaggcgtcaccatggacagcgacactgatgtggacgatgatggggtcgtgtcagacgct
gccacaaaagcaggaccgacagtatgtcagagtgcgcacacagcagactctgctttttca
gtgcaggcagaagattttcacctccacagtgacactgatgtagatgaggacgaagcaaaa
aatacaacagatgaaacacctaataaatcagatataaagcttacagctcttaaatctgct
cctgtggctcctgacaacctgcaggtagagagtgacacggatgacgaggctctccctgtc
cctgccaccagtaaaccctcagtggtcgctgctgttgcagattcacgccccactgcagtt
gcagatgctgatttggagattctctctgacagcgacacagatgtggaagatgcatctctt
ctggctatacctgttggtgtcacaaccttgtcagcttctcctggcccaactttaaaggct
tctctggcagattctgatgcagatacagatgtggatgaatctagcgtgccccctgttggg
gatgaggctaaaccagctgatgtcagagtcgacggcgatacagaagataagaagtcagat
attggagaagaaggtgaggaccaggtgcccaggctgcacagggaaactacacctgggttg
ctggctccccttctgcagaactgctccactcctgtgcagatgtcagatgaagaagtggaa
gacatggcaactcaagccttcgtcagtccctcttcaggttcattaaggcgagcggcagtg
cctgcagtaagacctgtagtattgtcgtcctgctcagacatccaggaggaggaggatttt
gctgtggctgagacgcagtcctttacatttcagagccgtgaccgtgtgagcagtgaggaa
ccaacccaagcttttgtacttgagtcttcttgtgacaataaaaatgaccaatctaccaaa
gaagagtctttccaactgggactgtctgacagcagccacctgcagtgtccagaccaagct
ttagctatggagaacacccaagcttttgtttctgtggagaggggtgtgaacctggaagat
acccaagcatatgcagccatgtcagctgcagacagatcctctgcagaaaatgacgcgaac
ctggaggccacacaggactatgtagaagataaagagactgagcgatatcaagtagatgtg
gccttagaagcaacacaggtatatgtggcagagccgtacagtcacgctgaggatgatgca
gatgatgatgcttgtgagacacagccttcagactttactgcctcttctactcttgccata
gcagaaacccaaccaatgttgcctattgcaggagaggaggatctggcagctgaaaatcca
gtttgctctgttcaacaaattcagccgagatccctcaaggaggatggtccaaaggcagct
cagcctcaggagaagggcctcagcgacgctcagtctgtaactgaaactcagcccgtgtgt
acaagtgacagtgaagcaagtgatgatgaaggctcatttccagctcagcgaaacagaaca
gcaaagccactgccacttgaagaagcgcagacacaagatctcacttgttcagagttgtcg
gtttctgaaacccagccaatgcacggtggaattgctgaaacccagcccatggctacatgt
gacgatgatgatgaagactcaatgccaggcccgagaaaaaggaaagcaaagcagcttcat
cttgaagaagaggagacgcaacctgtcgcagactctgagctctccactgctgaaacccag
cccgtggctacatgtgatgatgatgatgaagactcaatgccaggcccacgaaaaaggaaa
gcaaagcagctgcagcctgaagaagagatgcaaacccttgctagttctgaagtctctgct
ctggaaactcagcccttgagtacaaatgaaggccagcaaagtgatgaagaggatgtgatt
gcatgcactcggaaaagaaaagccaagccacttcagcttgaagaggagcagacgcagccc
ctcactagtgctgatgttgaaaccccggcagtagtgacaggtaaatgtgatgataaggac
tcaattccaggtccacggaaaagaaaggcaaagcagatgaagcttgaagaaaagacacag
ccagtcgataattctaaaatgacccatgttgaaactcgacccttgacaacaaaaactgga
ttatcgccttcagaagaatctgaagcgggaaccagtggagcttgtgttccaaatttaaga
gtgacaagagcaaaaccgagagaagaggaagatcaggtggcgtgtcctggaccatccaag
aggcagactagaggaaggagtggaaaacctttgtctgatggtgacaacaataaggagatg
gtaaaacgggctagagggagaaagataacgaagcagcagaaacatgatggtgaggaagag
gatgaaacaccggtaagagaaagaaacaagcaggctgtgaataagagcctgataaagcaa
caagatgggaaagatagagaggaggaagatggtgccgatctcagacaagaaagagaagaa
aatgataacgaaaggaggacgactgatgaaagaaagaagcatcaggatgagatagaaatg
caactaatggaagagaagttagaaacagaaggaagagtaaataaagaacaagaaagattg
caggctgaagatgcagcgagagcagagagagaaatcaaggagaaggaagaacaacagaaa
atagagtctgaaaggattgaaagagaagagcgggagaggttagaaagagaagaaaaagag
agattagaaagggaacgaaaggaacaagaaaaagaaactgcaaagagagaacaagaagag
aggcttgagcgggagcaacaactgcaagcaagactcgagagagaagaaagggaaatggag
gagagagagagagtggagaaagaaaaagaagcccaagaaaaacagttgaaagaactggaa
gaaaagaaagaggaacaagacaaatccaaaacgccttcaagaggccgaagaacaaccaga
agaactattgcttcacagagcacagcagagccagaccaagactcaactgtatcaaccaat
gacgatttcccagcaaggagaaccagatcacgctcaaactcctccaactcggtcagctcg
gagaggtctgcttcaagtgtccacgcccaggaaagcaagggcagagggagagggcgaggg
cgagggacgagggagaccagtgagacaccccagaaacccgtcgccagaagcagcaatcga
aggaccactgtggctgcaggggccgtagagcacgagcctgactcgtccaactcactagcc
cctgaggtttcaagctgcagcgtgagctctcataacagaggaagaggaggcaggcagcga
ggaagagcgaggaaaacagaacatgacccagactctatcccttctgttagtcagagtcaa
agtgatcagaatttaagccctgccaggggaagaaagggcaagaaagctgaggagtcctcc
aatgaggctctccataaaaatggtaaagaggactctcagccggctacaaccactagaggg
cgacaacaacccagtgcagctacagatgaggaagaccagtcgaagcaagaggaagcatgc
accagcgaggaatcgctacctaaaagaaatgtcaggggcagaggtcagagagcagtgaag
agtgaaactgtggagaaaccagttgctcctgcggtcagtgatgatgatgaggctaaagat
aaaagaaaagcaacgagagacttggaggcaaatactggagcagatctcagctgcagcaaa
aggaaagaaagatcttcaaaaacggcagaaacagacgaggaagaaggaaaaggcaaaaca
aacgatgagattcctgttagtttacaagggaagaaaagaggtagagcatccaccgctcag
gcaaagaagagcgcaaaagagtgtctctcagaggtgaaggaggaggagagagaaaagatg
gagggtgagactgtggagaaaaaagtcagaggtcgacaatcagcggtctcgagaaagaag
aaagaggagctggaagaaagtggaacatctttaactgccacaaatcaagatgcaaatttg
gaggcatcagagccccagactccaaccagcaacgcatcccggaagcggcaagctcctgca
aatttctctcccgtggcaaagagtcctcgctcctcctctgcatccccagcagcaagtggt
cgactacaaactgaaggccaggcatacaaggttctgtttacgggggtgatggatgaagca
ggggagaaagtgttggcgcgcttaggcggcagcttggctaaaggtgtgggagacatgaac
tgccttgtgactgacaaagtgcgcaggactgtcaaattcctttgtgcactggccaaaggc
attccaatcgtcactacagactggctggaaaagagtggcaaagctgggagcttcctgtct
ccctcctcctttattgttaaggatcctgagcaggagaagaagtttaatttctccttgcac
gagtctctaaggattgccagcagccagcctctcttaaagggatacgaggtccatgttact
agatcggttaagccagagccagttcacatgaaggacatcatttcctccagtggagctacc
tttctaccaaagatgccctcttctaataagcctcacactgtcgtggtttcctgcgaggag
gactggtctctgtgtcgcccggctctgtctgcatctctccctgtcgtcaccgctgagttc
atcctcacagggatcctgcagcagaaactcgattttcagtcccacacactctcgccttcc
acagcaaatgtacaacctgcaggtggcagaggaaggggcaggaggaagacttag

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