Maylandia zebra (zebra mbuna): 101469485
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Entry
101469485 CDS
T02814
Symbol
ndc1
Name
(RefSeq) nucleoporin NDC1
KO
K14315
nucleoporin NDC1
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101469485 (ndc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mze03019
]
101469485 (ndc1)
Messenger RNA biogenesis [BR:
mze03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
101469485 (ndc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
UNC-79
Motif
Other DBs
NCBI-GeneID:
101469485
NCBI-ProteinID:
XP_004555355
UniProt:
A0A3P9DEY6
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Position
LG18:complement(8585151..8596092)
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AA seq
666 aa
AA seq
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MFSAEQSCWFIRKVICWRAAASIAWAVLLLPPSTAIFVFLSKFSVLHPIQTISECFSMLT
SATAIFSFILLCGVIIMVGFLNFEYYTVIPTIACSKIALFGQLLHPRQLVNSLVHCIMGM
IVAWCSAVTIGFRYETLGHPCAQTDGYHQMCLNEYHLILLLGGAFVGFSHSLLGVIHNMN
YVSFHTVQQYKYLRFKGCLPLVVRCSATQALYSVRNFIVVYYFLGHIPRTWICKTLNLHL
GSSAHPLDSIAGLLDLSLLYHLWISATFLLFTWYIMLLLFRIFLTEGYSFPVQSSFTEDA
DHCLPKVLTEKQPMLLKFLALQDLALLSQHSPLRRCEVFSLSQPGGHPHNWNAISKECLS
LLADLTQRLVAYHDTVATNGRAKSLSSGSERKTSSETSGTEDFMSPRPTAFMKTPASVFA
RSIAGGQQSPLTAPFTPDLDSPFMSPALRRLAAPVEQGSPWYGTVQSPHIMRRVPKLWST
STDSQVNGSPPPSPASVPSDKQEPSKPSFLAQFLQNRREQVKNFLAKRVLIVYLFNKLPE
ASSQALFADSQAHIWALEGLSYLVQASFSEDQFGVVQTTLPSILSCMLVLQEAVDRHFKL
PHASSKPVRLTSSMGDSTYKTLRFALRATLKTAIYRITTTFGDHLNAVQLSAEHQKRLQQ
FLEYKE
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgttttctgcagagcagagttgctggtttatccgcaaggtaatttgttggagagctgca
gccagtattgcttgggctgtactgttgttgccacccagcacagcaatttttgtgttcctc
agcaagttcagtgttctccaccccatccagaccatatcagaatgcttctccatgctaaca
agtgcaactgccatcttctctttcatcctgctgtgtggagtgatcatcatggttggtttc
ttgaactttgagtattacacagtcattccaactattgcatgctcgaaaatcgcgctcttt
ggtcagcttctccaccctcgacagcttgtcaactccctggtccactgtatcatgggaatg
attgtagcttggtgttctgccgttaccattggatttagatacgaaactcttggccacccg
tgtgcgcagaccgatggttatcatcagatgtgtctgaatgaatatcatctcatccttctg
ctgggtggagcttttgttggattctctcacagtctgctgggtgtgatccacaacatgaac
tatgtctccttccatactgttcagcaatacaaataccttcgcttcaagggatgtcttcct
ttggtggttaggtgcagtgccactcaggcactttactctgtcaggaacttcatcgttgtt
tattactttttggggcacattccaagaacatggatctgtaaaacactgaatcttcacttg
ggcagctctgcccaccctcttgacagcatagctggattgctggacctctccctcctctac
cacctctggatcagtgccacctttctcctcttcacttggtacatcatgctgctgctcttt
aggatttttctcactgaggggtacagttttcctgtgcagtcatcttttactgaggatgca
gaccattgccttcctaaagtactgactgaaaagcagccaatgctattaaaattcctagct
ttgcaggacttggctctgttgtctcagcattctccattacgacggtgtgaagtcttcagt
ctgagtcaaccaggtggacatcctcataactggaatgctatcagtaaagagtgcctctct
ctgctggctgatcttacccagagacttgtagcctatcatgacactgtagcaaccaatggc
agggccaaatcactgtcaagtgggagtgaaaggaagacctcttctgaaacatcaggtaca
gaagatttcatgagtccaaggcctaccgcttttatgaaaactccagcttcagtcttcgct
cggtccattgctggaggccagcagagccctctaacagccccattcacccctgatctggac
agcccctttatgtctcctgcactgcggcgtcttgctgctcctgtggagcaaggctcacct
tggtatggcacagtgcagagcccccacatcatgaggcgagtgcccaaactctggtccaca
tccacagattcccaggttaatggcagtcccccgccatcaccagcttcagttcccagtgac
aagcaggaaccctccaaaccaagttttctggctcagttcctccagaacagaagagaacag
gttaaaaatttcttggcaaagcgagtgctgatagtgtatttgtttaacaagctcccagaa
gcctcgagtcaggctctctttgctgacagtcaggcccacatctgggctttggaagggctc
tcttaccttgttcaagcctcattctctgaagatcagtttggggttgtgcagactacatta
cccagcattctcagctgcatgctggtcttacaagaggctgtcgatcgacacttcaagctg
ccccatgcctccagtaagcctgtcaggttgaccagcagcatgggagactcaacatacaaa
actctgcgctttgctctcagggccacactaaagactgccatctacaggataacaaccaca
tttggtgatcacttaaatgctgttcagctgtctgcagagcatcagaaaagattgcagcag
tttctggagtacaaggagtaa
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