Maylandia zebra (zebra mbuna): 101469611
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Entry
101469611 CDS
T02814
Symbol
rorb
Name
(RefSeq) nuclear receptor ROR-beta isoform X1
KO
K08533
RAR-related orphan receptor beta
Organism
mze
Maylandia zebra (zebra mbuna)
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mze03000
]
101469611 (rorb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
mze03310
]
101469611 (rorb)
Transcription factors [BR:
mze03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
101469611 (rorb)
Nuclear receptors [BR:
mze03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
101469611 (rorb)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
DUF2716
Motif
Other DBs
NCBI-GeneID:
101469611
NCBI-ProteinID:
XP_004544274
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Position
LG12:complement(11373346..11393442)
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AA seq
482 aa
AA seq
DB search
MQVFLVLAFFLTAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQR
NCLIDRTNRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQARLQEQRQQ
QTGEAEALARVYSSSLTNGLSTLNHEIGGTYANGHVIELPKGGHGNGAGVPGGYYGMDST
QPSPDQSGLDMSGMKHIKQEPVYDLTPVPNLFSYGGYQESQLGPNNVSMGELDRIAQNII
KSHLETCQYTTDELQQLAWQTHSYEEVKMYQSKPRDVLWQQCAIQITHAIQYVVEFAKRI
SGFMELCQNDQILLLKSGCLEVVLVRMCRAFNPLNNTVLFEGKYGGMQMFKALGCDDLVS
AVFDFAKSMCSLQLTEEEIALFSAAVLISTDRPWLMEPRKVQKLQEKIYFSLQHIMQKNH
MDEDALAKLISRIPTLSALCTLHTEELQAFQQLHPETVNVLFPPLYKELFNPDPNSAMAM
PK
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtctttcttgttctcgctttttttcttacagcccaaatcgaagttataccatgc
aaaatctgcggagacaaatcatcaggaatccactatggcgtcattacatgtgagggatgt
aagggtttcttcagacgtagtcagcagaacaacgcctcctactcctgcccccgccagagg
aactgcctcatcgacagaacaaaccgcaaccgttgccaacactgccgcctgcagaaatgt
cttgccctaggaatgtccagagatgcggtcaagtttggccgcatgtccaagaagcagcgt
gacagtctgtatgcagaggtgcagaagcaccaggcacggctgcaggagcagcggcaacag
cagacaggcgaagcagaagctctggcacgcgtttactcatccagcctaaccaacggactt
tccacccttaaccatgaaattgggggcacctatgccaatggtcacgtcattgagctaccc
aaaggtggccatggtaatggagcaggagtccccgggggttactatgggatggattccacc
cagccgtctccagaccagtcaggtttggacatgtcgggcatgaagcacattaagcaggag
ccagtgtacgacctgacgccagtacccaacctgttcagctatggaggctaccaggagagt
cagcttgggcccaataatgtcagcatgggagagctggaccgtattgctcaaaatatcatc
aagtcccacttggagacatgtcagtacacaacagatgagctgcagcagctagcctggcag
acacattcctatgaagaggtcaagatgtaccagagcaagccccgtgacgtgctgtggcag
cagtgtgccatccagatcacccatgcgatccagtacgtggtggagttcgccaagcgcatc
tcagggtttatggagctgtgccagaatgaccagatccttcttctaaagtcaggttgtttg
gaggtagtcttggtgcggatgtgcagggcattcaaccctctcaacaacacagtactcttt
gaagggaagtatggaggcatgcagatgttcaaagccctaggttgtgatgacttagtgagt
gcagtgtttgactttgcgaagagtatgtgctcactgcagctaacagaggaggagattgca
ctgttctcagcagctgtactaatttccacagatcgaccgtggctgatggagcctcggaaa
gttcaaaagctccaggagaagatctacttttctctgcagcacattatgcagaagaaccac
atggatgaagatgcactggccaagctgatcagccgaatcccaacgttgtcagccctgtgc
acactccacactgaagagcttcaggccttccagcaactccacccagaaacagtcaatgtc
ctgtttcctccactctacaaagaactcttcaacccagacccaaactctgccatggccatg
cccaagtga
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