Maylandia zebra (zebra mbuna): 101469760
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Entry
101469760 CDS
T02814
Symbol
scn8aa
Name
(RefSeq) sodium channel, voltage gated, type VIII, alpha subunit a isoform X1
KO
K04840
voltage-gated sodium channel type VIII alpha
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
101469760 (scn8aa)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mze04040
]
101469760 (scn8aa)
Ion channels [BR:
mze04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
101469760 (scn8aa)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ_SCN5A_C
GPHH
HpsJ
FraC
Lustrin_cystein
Motif
Other DBs
NCBI-GeneID:
101469760
NCBI-ProteinID:
XP_014264295
LinkDB
All DBs
Position
LG20:complement(3456487..3505240)
Genome browser
AA seq
1966 aa
AA seq
DB search
MAAPLLAPPGPDSFRKFTPESLVVLEQRIQEEKNKKPPKQDSSYRDDDDENKPKPNSDLE
AGKSLPYIYGDIPKGMAAVPLEDLDPFYVNSQKTFIVLNRGKTIFRFSATPALYLISPFN
PVRRLAIKILIHSLFSMIIMCTILTNCIFMTFSDPPEWSKQVEYTFTGIYTFESLVKITA
RGFCIDGFTFLRDPWNWLDFMVISMAYITEFVDLGNVSALRTFRVLRALKTISVIPGLKT
IVGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRHKCVFWPINTNESYLANGSKG
FDWDEYITNDTNFYFLPGQLDALLCGNSSDSGRCPEGYTCMKAGRNPNYGYTSFDSFGWA
FLALFRLMTQDFWENLYMLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQNQ
ATMEEAAQKEEEFKAMLEQLKKQQEDAQTAAMATSAGTVSEDAVEDDGGGRLSCSSSEMS
KLSSKSAKERRNRKKKWRQKEQEKEKGDSEKFVKSESDDGSKRSRFRFPDNRLGRKSSIM
NQSLLSIPGSPFLSRHNSKSSIFSFKGRSKDVGSENEFADDEHSTVEECEERRGSLFSPY
RRSSYTGFHGKRNSTVDCNGVVSLIGPGPGGRLLPEVKIDKAATDESPTTEVEVKKKLSG
SLMVSVDQLNTSFGRKERANSVMSVITNTLVEELEESQRKCPPCWYKFANTFLIWECSPK
WIKIKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTPDFEDMLSVGNLVFTGIFAG
EMLFKLVAMDPYYYFQEAWNCFDGFIVTLSLVELALADVEGLSVLRSFRLLRVFKLAKSW
PTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKNYKDCVCKISAECELPRWH
MNDFFHSFLIVFRVLCGEWIETMWDCMEVAGQAMCLIVFMMVMVIGNLVVLNLFLALLLS
SFSADNLAATDDDGEPNNLQISVMRIKKGIAWIKAKMRLLMASLLRKPPMEDEQKPLEDM
YDKKLNCIANHTGVDINRDLDYAKNGNGTTSGIGSSVGKYMIDEDHMSFIHNPNLTVCVP
IAVGESDFENLNTEDFSSESDNENSKELDDTSSSEGSTIDIKPDVEEVVVVETVEEYMEP
ESCWTDACVAKYKCCDVDITMGWGKSWWFLRKTCYLIVEHNWFETLIIFMILLSSGALAF
EDVYIEQRKTIRIILEYADRVFTYIFILEMLLKWVAYGFVKYFTNAWCWLDFFIVDVSIV
SLVANALGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIF
WLIFSIMGVNLFAGKYYYCFNETSEEYFPTSVVDNKTQCFELINQNYSEVRWKNVKINFD
NVGAGYLALLQVATFKGWMDIMYAAVDSREVEKQPDYEVNIYMYIYFVVFIIFGSFFTLN
LFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPQNKIQGMVFD
FVTQQVFDISIMILICLNMVTMMVETDDQSDETEIVLYWVNFIFIVIFTTEFLLKLFALR
HYYFTNGWNIFDVVVVILSIVGMFLADLIEKYFVSPTLFRVIRLARIGRILRLIKGAKGI
RTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFGYVKHGAGIDDLYNFETFGNSMII
LFMITTSAGWDGLLLPILNYPPDCDPNLENPGTSVKGDCGNPSVGIFFFVMYIIISFLIV
VNMYIAIILENFSVATEESADPLSEDDFETFYEIWEKFDPTASQFISFAKLPDFADALEH
PLRVPKPNTIELIAMDMPMVSGDRIHCLDILFAFTKRVLGDSGELDMLRQQMEERFVAAN
PSKVSYEPITTTLRRKQEDVSARTIQNAYRAHLIRRGIIFKRIFANNKLENGGTNQEKKE
STPSTASLPSYDSVTKPEKEKQDDNKEEWARKEKDKNQKDEWESKC
NT seq
5901 nt
NT seq
+upstream
nt +downstream
nt
atggccgcaccccttcttgcaccgccaggacctgacagcttcaggaagtttactccagaa
tctttggtggtccttgagcagcgcatccaagaggagaagaacaaaaagccacccaagcag
gacagcagctaccgtgacgacgatgacgagaacaagcccaaacccaacagtgacctggag
gctgggaagagcctgccctacatctatggggacatccctaagggaatggcggcggtacca
ctggaggatctggacccattctacgtgaattctcaaaaaacatttatagtgctaaataga
gggaagacaatcttccgttttagtgccacacctgccttgtacttaataagtccttttaat
ccggttaggcgattagctattaaaattttgatacattctcttttcagcatgatcattatg
tgtactattttgaccaactgtatattcatgacctttagcgatcctcctgagtggtcaaaa
caagtagagtacacgttcacgggaatttatacgttcgagtctcttgtaaagatcactgcg
cgaggcttctgtatagatgggtttacattcctaagagatccatggaactggctggatttc
atggtcatttcgatggcatatataacagagtttgtggacctgggcaatgtatctgcgctg
agaacattcagagttctccgagcattgaaaactatctctgtcattccaggcctgaagacc
attgtgggtgccctgatccaatctgtgaagaagctttcggatgtgatgatcctgaccgtc
ttctgtttgagcgtctttgccctcattggtctccagctcttcatgggtaacctgcgccac
aagtgtgtgttctggccaatcaacaccaacgagagttacctagccaatggcagtaagggc
tttgactgggacgaatacatcacgaacgacaccaacttctacttcctgcctggccagttg
gacgctctgctctgtgggaacagctcagactctggccgctgcccggagggctacacatgc
atgaaagctgggaggaatccaaactacggctacaccagctttgacagcttcggctgggcc
ttcctggctctcttccgactcatgacacaggacttctgggagaacctttacatgctgacc
ctcagggcggcagggaagacctacatgattttctttgtcttggtgatctttgtgggttct
ttctacttggtgaatctgatcttggctgtggtagccatggcctatgaggagcagaatcag
gccaccatggaagaggccgcgcagaaggaagaagaattcaaggcgatgctggagcagcta
aagaagcagcaagaagatgctcagacggctgcaatggcaacctctgcaggcacagtgtcg
gaggatgcggttgaagacgatggaggagggcgtctttcctgcagttcgtccgagatgtcg
aagctcagctccaagagcgctaaagagcgccgcaaccgtaagaagaagtggcggcagaag
gagcaggagaaggagaaaggcgacagcgagaagtttgtcaagtcagagtcggacgatggc
agcaaaaggagccgcttcagattccccgataaccgcctgggccgaaagtcttccatcatg
aaccagtctctcctgagtataccgggctcacccttcctctcacgccacaacagcaagagc
agcatcttcagttttaagggccgcagcaaggacgtgggctcggagaacgaattcgccgac
gatgagcacagcaccgtcgaggagtgcgaggagcggcgaggctccctgttcagcccgtac
cggcggagcagctacactggcttccatggcaagaggaacagcacggtggactgcaacggc
gtggtgtcgctcattggccccgggcccggtggacgccttctgcctgaggtgaaaatagat
aaggcagctactgacgaaagtccgactactgaggttgaggtgaagaagaagctgtcgggc
tccctgatggtgtctgtggaccagctcaatacctcctttgggcggaaagagcgggccaac
agtgtcatgagcgtcattaccaacacactagtggaggaactggaggagtctcagcgcaag
tgtcccccatgctggtataagtttgctaacacattcctgatctgggagtgcagccccaag
tggattaagatcaaggagattgtgaatcttatagtcatggatccctttgtggacctggcc
atcaccatctgtatcgtcctaaacaccctcttcatggctatggagcattaccccatgacc
cctgactttgaagatatgctgtctgtaggaaatctggttttcacggggatcttcgcagga
gagatgcttttcaagcttgtagctatggatccgtactactactttcaggaggcctggaac
tgtttcgatggattcattgtgactctgagcttagtggagcttgctctggctgacgttgag
ggcctctcagtcctgcggtcattccgattgctcagagtgtttaagctggccaagtcgtgg
cccactctcaacatgctgatcaagatcattggtaactcagtgggagccttgggaaatctg
actctggtgctggccatcatagtctttatctttgctgtggtgggcatgcagctgtttggg
aagaattacaaagactgtgtgtgtaagatctctgctgaatgtgagctgccccgctggcac
atgaatgacttcttccactccttcctgatcgtctttcgtgtcctgtgtggtgagtggatc
gagaccatgtgggactgcatggaggtggccggccaggccatgtgcctaatcgtcttcatg
atggtcatggtcatcggtaacctggtggttttgaacctgttccttgccttgttgctgagc
tcattcagtgctgacaacttggcggcgacagatgatgacggtgagccgaacaacctgcag
atttctgtcatgcgcatcaagaaaggcatcgcatggataaaagccaagatgcgattactg
atggccagtctgctgaggaaaccaccgatggaagatgagcagaagcctttggaagacatg
tacgacaagaaactgaactgtatcgctaatcacactggggtggacattaaccgtgacctg
gactatgccaaaaatggtaacggcactaccagtggtattggcagcagcgtgggcaagtac
atgatcgacgaagaccacatgtcctttatccacaacccgaatctgaccgtttgcgtacca
atagctgtgggagagtccgactttgagaacctcaacacagaggacttcagcagcgagtca
gacaatgagaacagcaaagagctggatgacaccagttcttcggagggcagcaccatcgac
atcaaaccagacgtggaggaggtggttgtggtggagacggttgaggaatacatggaacca
gagtcctgttggacagatgcgtgcgtggccaagtataaatgctgtgatgttgacatcact
atgggatgggggaagagctggtggttcctgagaaaaacctgctacctgattgtggaacac
aactggtttgagacgctcatcatcttcatgattctcctcagcagtggcgctctggccttc
gaggatgtgtacattgagcagaggaagaccattcggatcattttggagtatgctgaccgg
gtgttcacctacatttttatcctggagatgttgctgaagtgggtcgcctatggttttgtc
aagtatttcaccaatgcctggtgctggctggacttcttcattgtggatgtgtctatagtc
agccttgtagctaatgcgctgggctactccgatctagggcccattaaatcactcaggaca
ctaagggccttgagacccctcagagccttgtcacgttttgaagggatgagggtggtagtc
aacgccttggtgggtgccatcccttccattatgaatgtgttgctggtttgcctcatcttt
tggctgattttcagtatcatgggggtcaatctctttgcgggcaagtactactactgtttc
aatgagacatccgaggaatattttcccaccagcgtggtcgacaacaagacccagtgcttc
gaactcattaaccaaaactattctgaggtcaggtggaagaatgtcaaaatcaactttgac
aatgtgggcgccggctatcttgcgctgctgcaagtggccacattcaaagggtggatggac
attatgtatgcagctgtggattcaagagaggtggagaaacagcctgactatgaagtcaat
atctacatgtacatctactttgttgtcttcatcatatttggctccttctttaccctgaac
ctcttcattggtgtgatcattgacaacttcaaccagcaaaagaaaaagtttggaggtcag
gacatcttcatgacagaggaacagaagaagtactacaacgccatgaaaaaactgggatcc
aaaaagccacagaaacctattcctcgaccgcagaataaaatccaagggatggtgtttgac
tttgtgacgcagcaagtctttgacatctccatcatgatactaatctgcctcaacatggtc
accatgatggtggaaacggacgatcagtcagatgaaaccgagatcgtcctctactgggtc
aacttcatctttattgtaatctttaccacggagttcttgctgaagctttttgcgctccgc
cactattacttcaccaacggctggaatatctttgacgttgtggtggtcatcctgtccatt
gttggtatgttcctggctgaccttattgagaagtactttgtgtcaccgaccttgtttagg
gtaatcaggttggctcgcattggccgtattcttcgtctgatcaaaggagcaaagggcatc
cggactttactctttgctttgatgatgtcactgccagctcttttcaatattggcctactg
ctcttcctcgtcatgttcatcttctccatatttggcatgtctaactttggctacgtaaaa
catggagcggggattgatgacttgtacaactttgagacctttggcaacagcatgatcatc
ctgttcatgatcaccacatcggctggctgggatggcttgctactgccgatcctcaactac
ccgccagactgtgatcccaacttggagaaccctgggacttcagtgaaaggtgactgtggt
aacccgtcagtggggatcttcttttttgtcatgtatatcatcatatctttcctgattgtg
gttaacatgtacatcgccatcatcctggagaacttcagcgtggctacagaggaaagtgct
gatcccctcagcgaggacgactttgagaccttctatgagatctgggagaagttcgatccc
actgcctctcagttcatttcttttgccaagctacctgactttgccgatgctttggagcac
ccacttcgtgtgccaaagcccaacactatagaactaattgccatggacatgcccatggtg
agtggcgatcgcatacactgcctggacatcttgtttgccttcacaaagcgtgtgctgggt
gacagcggtgagttggacatgctgaggcagcagatggaggagcgtttcgtggcagccaac
ccctccaaagtgtcgtatgaacccatcaccaccaccctccgccgcaaacaggaggatgtc
tctgccagaactatccagaatgcctaccgcgctcacctcatcaggcgcggcatcatcttc
aagcgcatttttgctaacaataagctggagaacggtgggaccaatcaggagaagaaggag
agcacaccatccacagcctctctgccgtcttatgacagcgtgaccaaacccgaaaaggag
aaacaggatgataacaaggaggagtgggccaggaaagagaaggacaaaaaccaaaaagat
gagtgggaatccaagtgttag
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integrated database retrieval system
