Maylandia zebra (zebra mbuna): 101469775
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Entry
101469775 CDS
T02814
Name
(RefSeq) putative ATP-dependent RNA helicase DDX5 isoform X2
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101469775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mze03041
]
101469775
03009 Ribosome biogenesis [BR:
mze03009
]
101469775
Enzymes [BR:
mze01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101469775
Spliceosome [BR:
mze03041
]
Complex A
U1 snRNP components
U1 related factors
101469775
Complex B
101469775
Ribosome biogenesis [BR:
mze03009
]
Eukaryotic type
Pre-60S particles
Helicases
101469775
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
ERCC3_RAD25_C
BNIP2
Motif
Other DBs
NCBI-GeneID:
101469775
NCBI-ProteinID:
XP_004539285
UniProt:
A0A3P9AV72
LinkDB
All DBs
Position
LG6:complement(31040039..31054758)
Genome browser
AA seq
633 aa
AA seq
DB search
MPGFSDRDRGRDRGYGGGPPRFGGGGGGNRGGPPPGKFGNPGERLRKKHWNLDELPKFQK
NFYQEHPDVTRRPLQEVEQYRRSKEVTVKGRDCPKPIVKFHEAAFPSYVMDVIVKQNWTE
PTPIQSQGWPVALSGKDMVGIAQTGSGKTLAYLLPAIVHIQHQPFLEHGDGPICLVLAPT
RELAQQVQQVAAEYGRASRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGK
TNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKD
YVQINIGALQLSANHNILQIVDVCNDLEKEDKLIRLLEEIMSEKENKTIIFVETKRRCDE
LTRRMRRDGWPAMGIHGDKSQQERDWVLNEFRYGKAPILIATDVASRGLDVEDVKFVINY
DYPNSSEDYIHRIGRTARSQKTGTAYTFFTPNNMKQASDLISVLREANQAINPKLIQMAE
DRGGRGRGGRGGYKDDRRDRYSGGGRSNFSGSSYRDSDRGFGSGPKSSFGGSKAQNGGNY
GGNSGNSSGNYGSSNYSNSNGQGNFGAPTNQVGGFGNQSFQGPPQFGGMQRATQNGMNHP
PFPFNSQPPPPQAQQQPPPPPMVPYTMPPPFPQ
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgccaggtttttcagacagagatcgtggcagagaccgaggatatggcggtgggcctcct
cgttttggtggtggtggaggaggcaataggggtggacctcctcctggaaagttcggcaac
cctggtgagaggctgcgaaagaagcactggaacctcgatgagcttcccaagtttcaaaag
aacttctaccaggagcacccagatgtcacccgcagaccacttcaagaggtcgaacagtac
cgaagaagcaaagaagtgacggttaaaggcagagattgccccaaaccgatcgtaaagttc
cacgaagctgcatttccaagctacgttatggatgtaattgtcaaacaaaattggactgaa
ccaactccaatccagtctcaggggtggcccgtagccctgagtggcaaagacatggttgga
atcgctcagactggctctgggaagacccttgcataccttctgcctgcaattgtgcacatc
caacaccagccattcttggagcatggagatgggcctatttgcttggtgctggcaccaacc
cgtgagctggcccagcaggtgcagcaagtggcggctgaatatggcagggcctcccgtctg
aagagcacctgcatctatggcggggcgcccaaagggccccaaatcagggaccttgaaaga
ggtgttgagatttgcatcgccactccgggtcgtctcattgatttcctggagtgcggtaag
actaatttgcgtcgttgcacctatctggtgctggacgaagctgaccgcatgctggacatg
gggtttgaacctcagatccgcaaaatagtggaccaaattcggccagaccgtcagaccctg
atgtggagcgccacctggcctaaggaagttcgtcagctggccgaggacttcctgaaggac
tatgtccagatcaatattggagcactgcagctcagtgccaatcataacatcctgcagata
gttgatgtttgcaatgaccttgagaaggaggacaaactgatccgtttgctggaagagatc
atgagtgaaaaggagaacaagaccattatttttgtggagaccaaaagacgttgtgatgag
ctcaccaggaggatgaggagagatgggtggcctgcaatgggaatccatggagacaagagc
caacaggagagagactgggtccttaacgaattcagatatggcaaagcgccaattctcatt
gcaacagatgtggcctcccgtggcttagatgtggaggatgtgaaatttgtcatcaattat
gactaccctaactcttccgaggattatatccaccgcattggacgcacagcccgaagtcaa
aaaacgggcacagcctacaccttcttcacccccaacaacatgaaacaagccagtgacctg
atctctgtgctccgcgaggccaaccaggccattaaccccaagctgatccagatggcagag
gacagaggaggtcgtggaagggggggaagaggtggctacaaggatgatcgccgggatagg
tattctgggggtgggaggagtaacttcagtggtagtagctacagggacagcgacagaggg
tttggcagtgggccgaagagctcctttggtggcagtaaggcccaaaatggtggcaactat
ggaggcaatagtggtaactctagtggtaactatggtagcagcaattacagcaacagcaat
ggacagggtaattttggcgctcctacaaaccaggtgggcggctttggtaaccaaagcttc
cagggtccccctcagtttgggggtatgcagagggccactcagaatggtatgaaccaccca
ccattcccattcaactcccagccgccgcccccacaggcccagcagcagccgccaccacca
ccaatggtgccctacaccatgccaccacccttccctcagtag
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