Maylandia zebra (zebra mbuna): 101469949
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Entry
101469949 CDS
T02814
Symbol
ncor1
Name
(RefSeq) nuclear receptor corepressor 1 isoform X1
KO
K04650
nuclear receptor co-repressor 1
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
101469949 (ncor1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mze01009
]
101469949 (ncor1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mze03036
]
101469949 (ncor1)
Protein phosphatases and associated proteins [BR:
mze01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
101469949 (ncor1)
Chromosome and associated proteins [BR:
mze03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
101469949 (ncor1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GPS2_interact
Myb_DNA-binding
Myb_DNA-bind_6
LOB
Motif
Other DBs
NCBI-GeneID:
101469949
NCBI-ProteinID:
XP_004557470
LinkDB
All DBs
Position
LG10:7269904..7330610
Genome browser
AA seq
2350 aa
AA seq
DB search
MSSSSGYPPSQGSFSSEQSRYPSQSVQYTFTSSRHPQDFTVPDYRNHMQDPQGRRRPSLL
SEFHPGAERPPERRHGYEQQFHSVSAQPEHEVLEAKRPRLETVAEAHITRTPSTAGGIVL
PVPHSVQDSLRATVEVKKETQFTVKVESSPGGPTLHMGEEQDTSPSKLSKEELIQSMDRV
DREIAKVEQQIFKLKKKQQQLEEEAAKPVEPEKPVTPPPVEHKHRSIVQIIYDENRKKAE
EAHKILEGLGPKVELPLYNQPSDTKVYHDNIKTNQVMRKKLILFFKRRNHARKQREQKIC
QRYDQLMEAWEKKVERMENNPRRKAKESRTREYYERQFPEIRKQREQQERFQRVGQRGTG
LSATIARSEHEISEIIDGLSEQENNEKQMRQLSVIPPMMYDSEQRRVKFINMNGLMDDPM
KVYKARQFMNVWTEHEKEIFKEKFVQHPKNFGLIASYLERKCVADCVLYYYLTKKNNNYK
TLVRRNYGRRRRNQQITRPSQEDKSDEKNEEDKSEKSEKKEDEEKKDEEEKDEKEDSRDI
GKDKEKCDGGEDDDGKEQNTPRGRKTANSQGRRKGRITTRSMANEAASVAAEEAPPTAPE
PSLPDPPQFPKTDPAQKAMKEPAKPQTPVASMDSAKAGAGETGETSRWTEEEMEVAKKGL
VEHGRNWTAIAKMVGTKSEAQCKNFYFNYKRRHNLDNLLQQHKQDTRKARADRSQGEGLA
TQSPDDDEDNAEDSEGGDNSSDTESAPSPSQADSSKSGDSKRADGAAGDTQCADQDKGQT
SNGKAPEPPCEFTVKQEKIPEGEVGSQEEKARVTSFAGSVHPKTEPLDVVMNLEEVKVKM
EPGIKEKGEKGDHGERLHSDNDSSATCSADEDVEAEPERQSRIFSMEKPSLLNPPGSVLV
PSPKQTQLNIDQLHQRAASIPPMVPGPFGTGGVPISGYAMLQHQIKAVHESAHQEEKQRQ
DHGKPLPYMPYDMMLAVDQETHSGQPGSPYRLSPRELRKASPDPNAPNVSCYSVPPVLHP
ATTQLVQNIPDGGRMTFRTIRPPNIPSPPPLIPTTKPTDKPSFIQGGSISQGTPGTYLPS
HAIYGPEGTKSSVGSISLGLPRQQDLNKPGAAVPSIQDCRGNPAKAGEGLPFRGSITQGT
PALAQSSIAADLLKGTITRLATEDPSSPDKARGEQLAKGHVIYEGKSGHIVSYDSLAIKN
PRENTRSPRTSHELKRTFNMMEEPMGRGHTGRDGAPLEGLISRALPRESIHGESKERPVI
TGSIMQGTPRTAAETYDDTMKYGKQLKQESPPARSFEGGIGKGKPYEGVNTIKEMGRSIH
EIPRQDSGQDMCKTPDLPDRRVLEGSMSQIHNLNQPTIKHNVKSLIPSPTKLPHNMPQLE
AMERTKYDEGKGVRHTSVVNSTTSVLRSTHQEASKSQLSPGLYEDANARRTPVSYSTNPM
SRGSPMLGRASEGGMGSAKSASHERKSTMTPTQRDSVPAKSPVSGGDSVPSHSPFDPHHP
HHRPEVYKSHLPPHLDPTLAFHRVLDPAFMFPRQPSPTGYHNNYQLYTIENTRQTILNDY
ITSQQMPRGLSPREQSVAIPYAPGSRGIIDLAQMPPTILLPHPGGTGTPTLERIAYLTGP
QPPFPPRAFNPTSMSQGHLAVANERERERERDREQQEKEREKEREQRERDHERERELRER
ERERANEYMRAGGPEQPVRPGSRGYLHSPSPSHRPQDVGVPQRPSIFQPKSVITSLMPLS
TAISAPQSTARHSTAADALAALVDAAASAPQMDVVKVKESKHERDDDMSSARRASSLSEQ
QQQETERRSLHSPYGAMSLPGSKAYPAYSESTGVGVKDKGPQTKSRIEEELRTHGKTTMT
AANFIDVIIKRQIASDKDSRERGSQSSDSSSSLTSSRYDNTGGGAIEVISPASSPVQPQQ
DKPEDVQQQASVGMRSYDMSRYRQSGEPPQSSSQQLSSSQADSYSQVPKTHRVMTLADHI
SHIITQDFARNKDPPPVSSSASAAFQSVVPPVSSSGRGKMPSRYSPENQVQAQHHQRPSS
RVSPENASDKPRARPGKSPERGGRPMENYEPISPPQSYQGMDKQESGGPPPQRREGDSSE
IRSDSRSPGSVSYLPSFFTKLENTSPMVKSKKQEIFRKLNSTSGVGDSDVGNAQPGTEIF
NLPAVTSSSSINPRNHSFSDPASNLGLEDIIRKALMGNLEDRQEDQQGGVTSNTGSDPRQ
EASPSPSMGKQKQGKANSRKSKSPNLGQVYGGGERPSSVSSVHSEGDYHRQAQSQWSWDD
RPSSTGPIQFPYNPLTMRILSNTPPTSIASPSIQSQQQQLQQNPAGAPGQRREWQSLLSE
QYETLSDSDD
NT seq
7053 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtagctcgggctaccccccgagtcaggggagcttcagcagtgagcagagccga
tacccatcacaatctgtccagtacacctttaccagcagccggcacccacaggatttcacc
gtcccagactaccggaatcacatgcaggatccacagggtcgcagaagaccgtctttactg
tccgaattccaccctggagctgaaaggcctccagagaggcgccatggttacgaacagcag
tttcactctgtctcagcccaacctgagcatgaggtcttggaggctaaacgccctcgcctg
gagactgttgctgaggctcatatcacccgcaccccttccactgcagggggtattgttctg
cctgtgccccatagtgtacaggacagcctaagagccactgtggaggtcaagaaggagact
cagttcactgtcaaagtggagtcttccccaggaggacctacactacacatgggggaggag
caggacacctctccttctaaactgtccaaggaagagctgatccagagtatggaccgtgta
gaccgagagattgctaaagtggagcagcagattttcaagttgaagaaaaagcagcaacaa
cttgaagaggaagcagcaaagccagtggagcccgaaaagccagtgactcctcccccggtg
gagcacaagcaccgcagcatagtccaaatcatctacgacgaaaacaggaaaaaagctgaa
gaagcccataaaatattagaaggccttggtcccaaggttgagctgcctttgtataaccag
ccgtcagacacaaaggtgtaccatgacaacatcaagacaaaccaagtcatgaggaagaag
ctgattttgttttttaagaggaggaaccatgcacgtaagcaaagggagcagaagatctgc
cagcgttatgaccagctgatggaagcatgggagaagaaggtggagagaatggagaacaac
cccagacgcaaagccaaggaaagcagaacacgggagtactatgaaaggcaattccccgag
atccgcaagcagagagagcagcaggaacgcttccagagggttggacaaaggggaacaggt
ctgtctgcaacaattgcaagaagcgaacatgagatttctgaaatcatagatgggctttct
gagcaggagaacaacgagaagcagatgagacagctgtcagtcatcccacccatgatgtat
gactctgagcagaggcgagtgaagttcattaacatgaacggcttgatggacgacccaatg
aaggtgtacaaagcccggcagttcatgaatgtttggaccgaacacgaaaaggagatcttc
aaggagaagtttgtccaacaccccaagaactttggcctgattgcctcctatcttgaaaga
aagtgtgttgctgattgtgtcctatactactacttgaccaaaaagaacaacaactacaag
acactggtgaggcgaaactatggaagacggaggaggaaccagcaaataacacgtccctca
caagaagacaagtcagacgagaagaacgaagaggacaagtctgagaagtcagagaaaaaa
gaggacgaggaaaagaaggacgaggaagagaaagatgaaaaggaggattctagggacatt
ggcaaggacaaagaaaagtgtgacggtggggaagacgacgacggaaaggagcaaaacacg
ccgcgtggcaggaagactgccaacagccagggacgccgtaagggaaggatcaccacacgc
tccatggccaatgaggctgcatctgtggcagctgaggaagcacctcccactgcccccgag
ccttccttgccagatccaccacagttccctaaaactgatccagctcagaaggccatgaag
gagcctgcaaaaccccagactccagtagcttccatggattctgctaaagctggcgctggt
gaaaccggagaaacttctcgctggaccgaggaggagatggaggttgccaaaaaagggctt
gttgagcatgggcgaaactggacagctattgccaaaatggtgggcaccaaaagcgaggca
cagtgcaagaacttctatttcaattacaagagacgtcacaacttggacaacctgttgcaa
cagcataagcaggatacacgaaaggctcgtgctgataggtctcaaggtgaaggtctagcc
acgcaatcaccggatgatgatgaggacaatgcagaggacagtgaaggaggtgacaacagc
tctgatacagagagcgccccttccccctctcaggctgactcctcaaagtccggtgactcc
aagagggcagacggcgctgcaggagatactcagtgtgctgaccaggacaaaggccagact
agcaatgggaaggctccagagcctccatgcgaattcacagtgaaacaagagaaaatccca
gagggcgaggtgggatctcaggaggaaaaagccagggtgacttcctttgcaggctcagta
catcctaaaacggaacctctggatgtggttatgaatctcgaagaggttaaagtgaagatg
gagcccggtatcaaggagaaaggcgaaaagggagatcatggcgaaaggctccactcagat
aatgactccagcgccacctgcagtgctgatgaggatgttgaagcagagcctgaaaggcag
agcagaatattctccatggaaaagccttcgttgcttaaccctccaggctcggtgttggtg
ccttcacctaagcaaacccagctcaacatcgatcagctgcatcagcgggcagcttcaata
ccacccatggtgcctggtccatttggcactggtggcgtgcccatcagtggttacgccatg
ttgcaacaccagatcaaagcagtgcatgagtcagcgcaccaggaagagaagcaaaggcag
gaccatggtaaacccttaccgtacatgccttatgacatgatgctggctgtggaccaggag
acccactccggtcagccaggctctccttacagactctcccccagggagttaagaaaggcc
tcacctgaccccaacgcccccaatgtctcctgctacagtgtgccaccagtccttcaccct
gcaactacccagctggtccagaatataccagatggaggccgcatgacgttcagaaccatt
cgacctcccaacattccctctcctcctccactcattccaactaccaagcccacagacaag
ccttccttcatccaaggaggctccatctcccagggaactcctggcacatacctgccatcc
cacgctatctatgggccagagggaactaagagcagtgtgggctccatctctctgggtctg
ccgcgtcagcaggatcttaacaagcctggagctgcagttccatccatacaggattgtaga
ggcaacccagcaaaggctggcgaaggtctgcctttcagaggctctatcactcagggcaca
ccagctctggcccagtcgagcattgctgctgaccttctgaagggcaccatcacaaggctt
gccacagaagacccaagcagcccagacaaagctaggggggagcagctggctaaaggtcat
gtcatctatgaaggcaaaagtgggcatatcgtgtcctatgatagtttagccatcaagaac
cccagggaaaacacccgcagcccccgaacaagtcatgagctgaaacgcaccttcaacatg
atggaggaacccatgggccgaggacacacgggcagagacggagccccgttggaggggtta
attagcagagctttgcccagagaaagcattcatggagaatctaaggaaagaccggtgatc
actggatccataatgcaagggacaccaagaactgccgcagagacttatgacgatactatg
aaatatggaaaacagttaaagcaggagagcccgcctgcccgctccttcgaagggggtatt
ggcaagggcaagccctacgagggcgtcaatacgattaaagagatgggtcgttctattcat
gaaatcccacgacaagattctggacaggatatgtgcaagactcctgatttgccagacaga
agggttttggagggctccatgtcacagattcacaatctgaaccagcccaccatcaaacac
aatgtcaagtccctgatccccagtcccactaagctgccacacaacatgccccaactggag
gccatggaacgaaccaaatacgacgagggtaagggagtacggcacacctctgtggtcaac
tccaccacctctgttctacgctccacacaccaggaggccagcaaatcccagcttagccca
ggcttgtatgaggacgccaatgctcgcaggacccctgttagttacagtaccaaccccatg
tctagaggatcacctatgctgggacgagcttcagagggtgggatggggtctgcaaagtct
gcttcacatgaaagaaagagcaccatgacaccgacgcagagagacagtgtcccagccaag
tccccagtgagcggtggtgactctgtaccctctcatagccccttcgacccccatcacccc
catcaccgacctgaagtgtacaaaagccatttgcctccacatcttgaccccaccctggcc
ttccacagagtgctggatcctgcattcatgttccccaggcagccatccccaacaggctac
cataacaactaccagctgtacaccatagagaacacacggcagaccatcctgaacgattat
atcacttcccagcagatgcccagaggactgtcaccgcgggaacagtctgttgctatccct
tatgcacccggatctcgagggattattgatctagcccagatgcctccaactatcctgttg
cctcaccctgggggaacaggtactcccactttggaacgcatcgcctacctcactggacct
cagccccctttccctcctagagctttcaacccaacctccatgtcgcaaggtcaccttgct
gttgccaatgagagagaacgggagagggagcgtgatcgggagcagcaggagaaggaaagg
gaaaaggaaagggagcagagggagagggaccatgagcgtgagcgggaattaagagagcga
gaacgagagcgagccaatgaatacatgcgtgcaggcggaccagagcagccagtccggcca
gggagtcgaggttatctgcactccccttctccctcacacagaccacaggatgttggagtt
ccacagcggccaagcatcttccagccaaagagtgtcatcacctctctgatgcctctttca
acagctatatctgcaccacagagtaccgcccgccacagtactgcagctgatgctctggct
gctttggtggacgccgcagcttctgctccacagatggacgtggtcaaagtgaaggagagc
aaacatgaacgagatgacgatatgtcttcagctcggcgagcatccagcctgtctgaacag
caacaacaggagacagaaaggcgatctctgcattcaccgtatggagctatgtctctgcca
gggagtaaagcctatccagcttattctgaaagcactggtgttggggttaaggataaggga
cctcaaacaaagtcccgcattgaagaggagcttcggactcatggaaagacgactatgaca
gccgccaatttcattgatgtcattatcaaacgtcagatagcctcggacaaagactcgcga
gagcgaggctcccagagctcggattcatctagcagcttgacatccagtcgctatgacaac
actggtggtggagcaattgaggtgatcagtccagctagttcccctgtccagcctcagcag
gacaaaccagaagatgtgcaacaacaggcatcggttggcatgcgatcttatgacatgagt
cgataccggcaatcaggggagccaccacagtccagttcccagcaactttcctcctcccag
gctgacagctactcacaggtccccaaaactcatcgagtcatgaccttggcagaccacatt
tcgcacatcataacacaggattttgccaggaataaggaccctcctccagtctcctcttca
gcctctgctgcattccagagcgttgtgccacctgtgtcctcttcaggtcgaggcaaaatg
cccagtcgctacagtcctgagaatcaggtgcaggcccaacaccaccagagaccctccagc
agagtttccccagagaacgcctccgacaagcccagagccaggcctggcaagtctccagag
cgaggaggcaggccgatggagaactatgaacccatctctccaccacagagctaccaaggc
atggacaaacaggagtcaggtggacctccaccccagcggcgagagggtgacagctcagag
attaggagtgactcacggtccccagggagtgttagctatctgccttccttcttcaccaag
ctggagaacacctcaccaatggtgaaatcgaagaagcaggagatctttcgtaagttgaac
tccacctctggtgttggtgattctgatgttggaaacgcacaaccaggaacagagattttc
aacctgcctgcggttaccagctccagcagcatcaaccccaggaatcactcctttagtgac
ccagccagtaatctgggtctggaagacatcatccgcaaggccttaatgggcaatttggag
gacagacaggaggaccaacagggtggtgtaacatccaacactggcagtgaccctcggcag
gaggccagtccatctcccagcatgggtaagcagaagcagggaaaagccaacagccggaaa
tccaagtctcctaacctgggtcaggtctacggtggaggggagcgcccctcatcagtgtcc
tccgtccactctgagggagactatcacagacaagcccaatcccagtggagctgggatgac
cgaccctcttccacaggacccatccagttcccatacaacccgctgactatgcgcatactg
agcaacacaccacccacttccatagcgtcaccctccatacagagccagcagcagcagctg
cagcagaatccagctggagcccctggccagcggcgagagtggcagtctttgctgtcggag
caatacgagaccctgtctgatagtgatgactga
DBGET
integrated database retrieval system
