Maylandia zebra (zebra mbuna): 101470166
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Entry
101470166 CDS
T02814
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101470166
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mze03041
]
101470166
03009 Ribosome biogenesis [BR:
mze03009
]
101470166
Enzymes [BR:
mze01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101470166
Spliceosome [BR:
mze03041
]
Complex A
U1 snRNP components
U1 related factors
101470166
Complex B
101470166
Ribosome biogenesis [BR:
mze03009
]
Eukaryotic type
Pre-60S particles
Helicases
101470166
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
ERCC3_RAD25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
101470166
NCBI-ProteinID:
XP_004563061
UniProt:
A0A3P9B809
LinkDB
All DBs
Position
LG4:6990607..6995996
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AA seq
624 aa
AA seq
DB search
MPGYSDRDRGRDRDRGYGGGPPRFGGSRGGGGGGGKFGNPGDRLRKKHWNLDELPKFEKN
FYQQHPDVARRSHPEVEQYRRSKIITVKGRDCPNPIMKFHEASFPSYVMDVINKQNWTEP
TPIQAQGWPLALSGMDMVGIAQTGSGKTLAYLLPAIVHINHQPFLERGDGPICLVLAPTR
ELAQQVQQVAAEYGRASRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKT
NLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKEY
VQINIGALQLSANHNILQIVDVCNDGEKENKLIRLLEEIMSEKENKTIIFVETKRRCDDL
TRRMRRDGWPAMGIHGDKSQQERDWVLNEFKYGKAPILIATDVASRGLDVEDVKFVINFD
YPNNSEDYIHRIGRTARSQKTGTAYTFFTPNNMRQAGDLVSVLREANQAINPKLLQMAED
RGGRSRGGRGGDYRDNHRDRYSSGRRDFGNFRDRDNRGFDNGPAKSYGMSSQNGGYGGNN
GNGFNGGSYNGNGQSNFSSNQTGSFVGQNNFQGQQFGAGKAVAQNGVSHPPFPFPQGQAP
PPPQQQQHPPPSLVPYPMPPQFSQ
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgcctggatattccgacagagatcgtggcagagacagggatagaggttatggcggtggg
cctcctcgtttcggtggaagccgtggtggtggtggcggtggaggaaagtttggcaatccc
ggtgaccgactgcggaagaaacactggaacctggacgagctccccaagtttgagaaaaac
ttctatcagcagcatccagacgttgcccggaggtctcatccagaggttgaacagtacagg
agatccaaaataattacagtgaaggggagggattgcccaaatcctatcatgaagtttcat
gaagcaagctttccctcatatgtgatggatgtcatcaacaaacagaactggactgaacct
acacccatccaggctcagggctggcctctggctcttagtggcatggatatggttggcatt
gctcagactggttctggcaaaactcttgcttatctgctgcctgcaatcgttcacatcaac
caccagcctttcttggaacgtggagatggtccaatttgtttagtgcttgccccaacccga
gagctggcacaacaggtgcaacaggtggccgctgaatatggcagagcatctcgtctaaag
tccacctgcatctatggtggtgcacctaaaggaccccagattcgtgacctggaaagaggt
gtggagatctgcattgccactccaggcagactcattgacttcctggaggcaggaaagacc
aacctccgtagatgcacgtaccttgtgcttgatgaggctgacagaatgctggacatgggc
tttgagccacagattcggaaaatcgttgaccaaatcagacctgaccggcagactctgatg
tggagtgccacttggcccaaagaagttcgccagctagctgaagatttcttgaaggaatat
gttcagatcaatattggggcactgcagctcagtgcaaaccataacatcctgcagatagtg
gatgtgtgcaatgatggcgagaaggagaacaagctcattcgtctgcttgaggaaataatg
agtgaaaaggagaacaagaccatcatctttgtagagactaagaggcggtgtgatgacctt
accaggaggatgagaagggacggatggcctgctatgggaatccatggagataaaagccag
caggagagagactgggtgctcaatgagttcaaatatgggaaggcgccaattctcattgcc
acagatgttgcatccaggggtttagatgttgaagacgtcaaatttgtcatcaactttgac
taccccaacaactccgaggactatatccaccgcattggcagaacggctcgtagccaaaag
acaggcacagcctataccttcttcacaccaaacaacatgaggcaagccggcgacctcgtc
tctgtacttcgagaggccaaccaggctatcaacccaaagctcctccaaatggcagaagac
agaggaggtcgttcaaggggaggcagaggtggtgactatcgagataatcatcgagatagg
tattcctcaggaaggcgcgattttggcaattttagggacagggacaacagaggctttgat
aatggaccagctaagtcttatggcatgagttctcagaatggaggctatgggggcaacaac
ggcaatggcttcaatggaggaagctacaatggtaacggacagtcaaactttagtagtaac
cagactgggtcattcgtaggccagaacaacttccagggccagcagtttggtgctggtaag
gctgttgcgcagaatggtgtgagtcatcccccattccccttcccccagggacaggctccg
ccaccgccgcagcaacagcagcatcctccaccgtcactggtgccgtaccccatgcctcct
cagttctcacagtaa
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