Maylandia zebra (zebra mbuna): 101470444
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Entry
101470444 CDS
T02814
Name
(RefSeq) ATP-dependent RNA helicase DDX19A
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze03013
Nucleocytoplasmic transport
mze03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101470444
03015 mRNA surveillance pathway
101470444
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mze03019
]
101470444
Enzymes [BR:
mze01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101470444
Messenger RNA biogenesis [BR:
mze03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
101470444
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
DUF4476
Motif
Other DBs
NCBI-GeneID:
101470444
NCBI-ProteinID:
XP_004560422
UniProt:
A0A3P9DB38
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All DBs
Position
LG20:14336437..14345630
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AA seq
483 aa
AA seq
DB search
MSQNSWAAAVDVQEATSSQLDFSKKVSGVRGPRNVIGDINGNIMPVKAGNGGWGDERVNL
AEQSLLNKLIRRSLVRNRNQVEVLQADPNSPLYSVKTFEELRLKPELLKGVYNMGFNRPS
RIQENALPMMLAQPPQNLIAQSQSGTGKTAAFSLAMLSHVNPDNKWTQCLCIAPTYELAL
QTGQVIEQMGKFCPDVKLAYAIRGNRMERGAKLQQQIVIGTPGTVHDWCTKYKLIDPKKI
TMFVLDEADVMIATQGHRDQSIRIHRQLPMNCQMLFFSATFEDSVWRFAEQIVSEPNIIR
LKREEETLDTIKQFYVNCKEKEDKFTALCNLYGALTIAQAMIFCKTRKMAAWLTESLTKE
GHQVALLSGEMTVEQRAAVIERFRSGKEKVLVTTNVCSRGIDVEQVSLVVNFELPVDLDG
NADNDTYLHRIGRTGRFGRRGFAVNMVDSEHSMDIIKQIEMHFDRKIIKLDTSNLEEMEN
LIS
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaaaactcttgggcagctgcagtggatgttcaggaggctacatcctcacagctt
gacttttccaaaaaagtcagtggagttcgtggtccacgcaacgtgataggagacataaac
gggaatatcatgcccgtgaaggccggaaatggaggatggggagacgagcgagtcaacctg
gccgagcagtctctgctgaacaaactaatccgccgctcactggtgaggaacagaaaccag
gtggaggtcctgcaggcggaccccaactctccactgtactcggtgaagacctttgaggag
ctgagactgaagcctgagttgctgaagggggtgtacaatatgggctttaacagaccatca
aggatccaggaaaacgctttgcctatgatgttggcacagccacctcagaatctgattgca
cagtcgcagtctggcacaggtaaaactgctgcattttctctggccatgctcagccatgta
aaccctgacaataagtggactcagtgcctttgcatcgcaccgacgtacgagctcgcattg
cagactggtcaagtcattgagcaaatggggaaattttgtccagatgtgaagctggcatat
gccattcggggaaatagaatggagcgaggagccaagttgcaacagcagattgtcattggt
acaccgggcacagtccacgactggtgcaccaagtacaagctcattgaccccaaaaagatc
actatgtttgtgctggatgaggctgatgtgatgatcgccacccagggccaccgggaccag
agcattcgaatccacagacagctgccgatgaactgtcagatgctctttttctctgcaaca
tttgaggactctgtgtggaggtttgcagagcaaattgtttctgaacctaatataatccgg
ctaaagcgtgaggaggagactctggataccatcaaacagttctatgtgaactgcaaagag
aaggaggacaagttcacggcactctgcaatctatacggggcccttaccattgcacaggcc
atgatcttttgcaagacccgaaagatggctgcctggctgacagaaagtctgaccaaagag
ggccatcaggtggcattgctaagtggtgaaatgacagtggagcagcgagctgctgtcatt
gaacgcttcaggagcggcaaagagaaagtgcttgtgaccacgaatgtgtgctcaagaggt
attgatgtggaacaggtgtctttggtggtgaacttcgaactcccagttgatctggatggg
aatgctgacaatgatacataccttcaccgcattggccgtaccggccgttttggccgacgt
ggatttgctgttaatatggtggacagcgagcacagcatggacattataaaacagattgag
atgcatttcgacaggaaaatcatcaaacttgacacctccaatctggaggaaatggagaac
ctgataagctga
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