Maylandia zebra (zebra mbuna): 101470510
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Entry
101470510 CDS
T02814
Symbol
dis3
Name
(RefSeq) exosome complex exonuclease RRP44
KO
K12585
exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101470510 (dis3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mze03019
]
101470510 (dis3)
Messenger RNA biogenesis [BR:
mze03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
101470510 (dis3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_Dis3
PIN_4
Rrp44_CSD1
Rrp44_S1
CSD2
OB_HELZ2
Dis3l2_C_term
Motif
Other DBs
NCBI-GeneID:
101470510
NCBI-ProteinID:
XP_004551551
UniProt:
A0A3P9DRE8
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All DBs
Position
LG13:complement(12224947..12232672)
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AA seq
950 aa
AA seq
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MLKSKTFVKKTRSGGVMKVVREHYLRDDIWCGSEVCTECKQESTVLQKDACMESSLCSYP
HYLVPDTNVVLHQIDILEDPVICNVIILQTVLQEVRHRSAPVYKRLKDIIHEKEKRFYTF
TNEHHRDTFIEREPGESANDRNDRAIRVAVKWYSQHLKTFESDTDGLKVVLLTNDQGNKQ
KAQDNGLLVYKCEEYVKSLIANPELVDRLALSSDDKNEITSSKVLFPEHLPLSRIQTGIK
SSSFLQGTFRASRDNYLEATVFVQGEGEDSTEVLIQGLQNLNRAVHQDVVAVQLLPRSEW
VAPSSVVLQDEGTAKDDEDAEEEEGKLRTAAVEAARKPTGKVVGIIKRNWRPFCGMLNVS
QIKESTRHLFTPADRRIPRIRIETRQASTLSGQRIMVAIDGWPKDSRYPNGHFVRSLGGA
GEKDTEEEVLLLEHDVPHQAFSQAVLSFLPKMPWAITPEDMMKREDLRPLTVCSVDPPGC
TDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDKEAANRGTTVYLCGKRIDMVPEL
LSSNLCSLRSNVDRLAFSCIWEINHKAEILKTRFTKSVINSKASLTYAEAQMRIDDTNKN
DDITKSLRGLNKLAKILKRQRIEKGALTLSSLEVRFHMDSETHDPIDLQTKELMETNSMV
EEFMLLANISVAQKIYDEFSECALLRKHPAPPPSNYDILIKAAKSKEVKIHTDSAKALAD
SLDAAKVDGFPYFNTLLRILATRCMMQAVYFCSGMDSDFHHYGLASPIYTHFTSPIRRYA
DIIVHRLLAVAIGADTTYPDLMDKHKQSALCNNLNYRHKMSQYAQRASVAFHTQLFFKSR
GILNEEGFVLFVRKNAIIVLIPKFGLEGTVFFDSKDKVSPNIVFEEEGPTLSVEQHKFHI
FDKVKVTISLDDSNIQHQKIRMALIEPVIPGVSVPAPDTERPAKKQKLDH
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagtctaaaaccttcgttaagaagacccggtcgggtggggtgatgaaggtagtg
cgtgagcattatctgagggatgatatttggtgcgggagtgaagtttgcactgaatgcaaa
caggagtccacggtgctgcagaaagacgcgtgtatggagagcagtctctgctcctatcca
cattatctggtccctgacaccaatgtggtgcttcatcagatcgatatactggaagatcct
gtgatttgcaatgtgattatccttcaaactgtactgcaggaggtgcgccaccgcagtgca
cccgtctacaaacgcctgaaggacattatacacgagaaagaaaaacgcttctacactttt
accaatgaacaccacagagatacattcattgaacgtgaaccaggggagagtgccaatgac
cgaaatgaccgggcaattcgtgtagcagtcaaatggtacagccagcacctgaagacattt
gagtctgacacagatggtctcaaggtggtcctcctcaccaatgatcaagggaacaagcag
aaagcacaggacaacggcctgctggtgtacaaatgtgaagaatatgtcaagagtctgata
gcaaaccctgagcttgtggatcgcctggccttgtccagtgatgacaagaatgaaattact
agcagtaaagtgttatttccagagcaccttcccctatccagaatccaaacaggaattaaa
agtagctccttcctccaaggcacctttagggccagcagagacaactatttggaggcaact
gtgtttgtccagggagagggagaagacagcacagaggttctcatccagggtcttcagaac
ctcaacagagcagtgcatcaggatgtggttgctgtgcagcttttgccgcgaagtgagtgg
gtggcaccgtcctcagttgtccttcaggatgaaggcaccgcaaaggatgatgaggatgct
gaagaagaggaggggaaattgagaacagctgcagtcgaggcagcgaggaagcccactggc
aaggtggtggggatcatcaaaagaaactggaggccattctgtggcatgctgaatgtttcc
caaatcaaagagtccactcggcatcttttcaccccagcagaccgccgtatcccacgcatc
cgcattgaaacgcggcaggcatccacactgtcaggccagaggatcatggtggccattgat
ggctggcccaaagactccagatatccaaatggtcattttgtacgcagtttgggaggtgca
ggggagaaggacacagaagaggaggtgctgctactggagcatgatgtccctcatcaggct
ttctcccaggcagtactcagtttcctccctaagatgccgtgggccatcacaccagaggac
atgatgaaaagggaggacctgaggcctctgacagtttgcagtgtggaccctccaggatgc
acagatatagacgatgctctgcactgtagagagctggaaaatggaaacctcgaggtgggc
gtccacattgctgatgtcagccacttcatcagacctggcaacgctctagacaaagaggca
gccaaccgtggcaccacagtgtacctgtgtggcaaaaggatagacatggttcctgaactg
ctcagctccaatctttgttctctgcggtccaatgtggacagactcgccttttcgtgtatc
tgggaaataaaccacaaggctgaaattctaaagactcgattcacaaaaagtgttattaac
tccaaggcatctttgacctatgctgaggcccagatgaggattgatgacaccaacaagaat
gacgatataacaaaaagcctacggggtctgaacaaactagctaaaatcctcaagaggcag
aggatagagaaaggggcactgacactgtcctctttagaggtccgttttcacatggacagt
gaaactcacgaccccattgatcttcagaccaaagaactcatggagacaaactcaatggtc
gaagagttcatgttgctggccaatatttcagttgctcagaagatttacgatgaattctca
gagtgcgctctgctgaggaaacacccagcaccacctccgtctaactatgacatcctaatc
aaagctgcaaagtctaaggaggtcaagatccacacagattcagcaaaggcactggctgac
tcgcttgatgcagccaaagtggatggattcccatactttaacacgctgctgcgcatcctg
gccactcgctgcatgatgcaagccgtctatttttgttctgggatggacagcgatttccat
cattatggtctcgcctcgcccatttatacgcacttcacgtcccctatcaggaggtacgct
gatatcatcgtgcaccgactgctggcagtggctataggtgcagacaccacctacccagat
ttaatggacaagcataaacagtcagctctctgcaataacctcaactacagacacaaaatg
tctcagtatgcacagcgggcttctgtggccttccacacacagttgttttttaagagccga
ggaatacttaatgaagaaggattcgttctgtttgtgaggaagaacgcaatcatcgtactc
atcccaaagtttggcttggagggaactgtgttctttgactcaaaagacaaggtttcccca
aacattgtgtttgaggaagagggtcccactctgtctgtagaacagcacaagttccacata
ttcgacaaggtgaaggtcaccatcagcctagatgactccaatattcagcaccagaagatc
cgcatggctttgattgaaccagtgatccctggtgtgagtgtcccagccccagataccgaa
agaccagccaagaaacaaaaattggaccactga
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