Maylandia zebra (zebra mbuna): 101470618
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Entry
101470618 CDS
T02814
Name
(RefSeq) retinoic acid receptor RXR-gamma-B isoform X1
KO
K08526
retinoid X receptor gamma
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze03320
PPAR signaling pathway
mze04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
101470618
03320 PPAR signaling pathway
101470618
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mze03000
]
101470618
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
mze03310
]
101470618
Transcription factors [BR:
mze03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
101470618
Nuclear receptors [BR:
mze03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
101470618
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Gene cluster
GFIT
Motif
Pfam:
Nuc_recep-AF1
Hormone_recep
zf-C4
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
101470618
NCBI-ProteinID:
XP_004555079
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Position
LG23:2688068..2718031
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AA seq
465 aa
AA seq
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MWHPVASPGSGGSPGTEIGYGHYSTGPMSTAHSHPPLMGSMVGHPSVISTSRPLPSPMST
LGSPMNGLASPYPVITSSLGSPSVSLQSTPNMNFGPLSSPQMNSMNSVSSSEDIKPPPGL
QNLGNINYQCTSPGGMSKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLSYTCRDN
KECLIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRGKERGENEVESTSSFNEDMPVDK
ILDAELAVEPKTETYSDGSPGNSTNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQ
VILLRAGWNELLIASFSHRSVTVKDGILLATGLHVHRSSAHSAGVGSIFDRVLTELVSKM
KDMKMDKTELGCLRAIVLFNPDAKGLSNPAEVEGLREKVYASLESYTKQKYPDQPGRFAK
LLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQIT
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgtggcatccagtggcatcacctggaagtgggggcagccctggaacggaaataggttat
ggtcactactctacagggccgatgagtacagcccactcccacccccctttgatgggcagc
atggtgggtcacccatcagtcatcagcacctccaggcccttaccgtcccccatgtccacc
ttgggctcaccaatgaacggcctggcctctccctatccagttattacatcttccctgggc
tcgccctctgtatcgctgcagtctactcccaacatgaacttcggaccactcagcagtcca
cagatgaactctatgaacagtgttagcagctcagaggacatcaagcctccgccgggccta
cagaatctgggaaacatcaactaccaatgtacgagcccgggagggatgtcaaagcacatc
tgtgccatttgtggggaccgctcctcaggaaagcactatggtgtatacagctgtgaggga
tgtaaaggtttcttcaagaggaccgtgcgcaaagatctcagctacacttgtcgagataac
aaggagtgcctgattgacaagcgccagcgaaaccgctgccaatactgccgctaccagaag
tgcctggccatgggcatgaaaagagaagcggtgcaggaggagaggcagcgtgggaaagag
cggggtgagaatgaggtagaatccaccagcagtttcaatgaggacatgcctgtggacaag
atcctagatgctgagttggctgtagaacccaaaacagagacgtacagcgacggcagcccc
gggaactcgaccaatgaccccgtcaccaatatctgccaagcagcagacaagcagcttttc
accttggtggagtgggcgaaaaggatcccgcacttctccgagctccccctcgatgaccag
gtcatcttactacgagcaggctggaacgagctactaattgcatcattctcgcatcgctcg
gtcacggtaaaagacggtatcctgctggcaacaggtcttcacgtccacagaagcagcgcc
cacagtgctggagttggctccatctttgacagagtactcacagagttagtatctaaaatg
aaagatatgaagatggataagacggagctcggctgcttgcgagcaattgtcctcttcaat
ccagatgcaaaaggtttgtctaacccagcagaggttgaggggctgagagaaaaggtctat
gcttcattggagtcgtatacaaaacagaagtacccggaccagcctggcaggtttgccaaa
ctgctgctgcgcctgcctgccctgcgctccatcggcctcaaatgtttggagcatctgttc
ttcttcaagctaattggggacacgcctattgacacctttttgatggagatgctggaggct
ccgcatcagatcacatga
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