Maylandia zebra (zebra mbuna): 101470814
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Entry
101470814 CDS
T02814
Symbol
vsx1
Name
(RefSeq) visual system homeobox 1 isoform X1
KO
K09335
visual system homeobox protein 1
Organism
mze
Maylandia zebra (zebra mbuna)
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mze03000
]
101470814 (vsx1)
Transcription factors [BR:
mze03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
101470814 (vsx1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
101470814
NCBI-ProteinID:
XP_004575352
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Position
LG13:complement(1851935..1855757)
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AA seq
365 aa
AA seq
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MMTGREELSEEKPRVKLLSPGFGIDKSRLHGPGLRSKGFAITDLLGLETDLQARQQPGGA
PFASGPGTEQHGAGPGLGGFSFPGGSLPLGLGFLCSLAAQQPAGAPCFLPGHLPLLQARP
DSHYLQNLEAQREAYSDEECLSDRNDPKTSGNSQKRKKRRHRTVFTSHQLEELEKAFQEA
HYPDVYAREMLAMKTELPEDRIQVWFQNRRAKWRKREKCWGRSSVMAEYGLYGAMVRHSI
PLPESILNSAKNGMMGSCAPWLLGEPHARMHKKSLEMSKKCSSPPASDSARSDSFCDASE
RRGSSKAQEPEEDKLMEEEEDEVEEEVAIDLSSSSKQQQQEEGGASIRTASSPQQQSCSE
SDEHS
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgatgaccgggcgggaggagctcagcgaggagaagccgcgggtgaagctgctgtccccg
ggtttcggcatcgacaagagccggctgcacggccccgggctccgctccaaaggcttcgcc
atcaccgacctgctgggcctggagacagacctgcaggcccggcagcagcccggcggggct
cctttcgcctcggggcccgggacggagcagcacggggccggtcccggcctcggcgggttc
tccttcccgggggggtcgctgccccttggcctaggcttcctgtgcagcctggcggcgcag
cagcccgccggggcgccgtgcttcctgcctggacacctgccgctgctgcaggcccggccc
gacagccactacctgcagaacctggaggcccagcgggaggcctattccgatgaagagtgt
ctgtcggaccgtaacgaccccaaaacctccggaaactctcagaagaggaagaagaggaga
caccggacggtgttcacctcccaccagctggaggagctggagaaggccttccaggaggct
cattaccccgacgtgtacgcccgggagatgctggccatgaagacggagctgcccgaggac
aggatacaggtgtggtttcagaaccggcgggccaagtggcgtaagcgtgagaagtgctgg
ggtcgcagcagcgtcatggcggagtacggtctgtacggcgccatggtgcgacactccatc
ccgctgcccgagtccatcctcaactctgccaagaacggcatgatgggatcgtgcgccccc
tggctgctcggtgagccgcatgcacggatgcacaagaagtctttggaaatgtccaaaaag
tgttccagccctccggcgtccgactcggcgcgctccgattcgttctgcgatgcctcggaa
cgacgaggttccagcaaggcccaggagccggaggaggacaagctgatggaggaggaagag
gacgaggtggaggaggaggtggccattgacctgtccagctcatctaaacagcagcagcaa
gaggagggcggagcctcgataagaaccgcctcttcaccacagcaacaaagctgcagcgaa
tcagacgaacacagctga
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integrated database retrieval system
